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D-Ribulose-5-Phosphate 3-Epimerase: Cloning and Heterologous Expression of the Spinach Gene, and Purification and Characterization of the Recombinant Enzyme1

Yuh-Ru Chen, Fred C. Hartman*, Tse-Yuan S. Lu, and Frank W. Larimer

University of Tennessee-Oak Ridge Graduate School of Biomedical Sciences, Oak Ridge, Tennessee 37831 (Y.-R.C.); and Protein Engineering Program, Life Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831 (F.C.H., T.-Y.S.L., F.W.L.)

We have achieved, to our knowledge, the first high-level heterologous expression of the gene encoding D-ribulose-5-phosphate 3-epimerase from any source, thereby permitting isolation and characterization of the epimerase as found in photosynthetic organisms. The extremely labile recombinant spinach (Spinacia oleracea L.) enzyme was stabilized by DL-alpha -glycerophosphate or ethanol and destabilized by D-ribulose-5-phosphate or 2-mercaptoethanol. Despite this lability, the unprecedentedly high specific activity of the purified material indicates that the structural integrity of the enzyme is maintained throughout isolation. Ethylenediaminetetraacetate and divalent metal cations did not affect epimerase activity, thereby excluding a requirement for the latter in catalysis. As deduced from the sequence of the cloned spinach gene and the electrophoretic mobility under denaturing conditions of the purified recombinant enzyme, its 25-kD subunit size was about the same as that of the corresponding epimerases of yeast and mammals. However, in contrast to these other species, the recombinant spinach enzyme was octameric rather than dimeric, as assessed by gel filtration and polyacrylamide gel electrophoresis under nondenaturing conditions. Western-blot analyses with antibodies to the purified recombinant enzyme confirmed that the epimerase extracted from spinach leaves is also octameric.


1   This research was supported by the Office of Biological and Environmental Research, U.S. Department of Energy, under contract no. DE-AC0596OR22464 with the Lockheed Martin Energy Research Corporation.
*   Corresponding author; e-mail ffh{at}ornl.gov; fax 1-423-574-0793.

Plant Physiol. (1998) 118: 199-207
Copyright Clearance Center:   0032-0889/98/118//09
© 1998 American Society of Plant Physiologists




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S. Kopriva, A. Koprivova, and K.-H. Suss
Identification, Cloning, and Properties of Cytosolic D-Ribulose-5-phosphate 3-Epimerase from Higher Plants
J. Biol. Chem., January 14, 2000; 275(2): 1294 - 1299.
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J. Biol. Chem.Home page
Y.-R. Chen, F. W. Larimer, E. H. Serpersu, and F. C. Hartman
Identification of a Catalytic Aspartyl Residue of D-Ribulose 5-Phosphate 3-Epimerase by Site-directed Mutagenesis
J. Biol. Chem., January 22, 1999; 274(4): 2132 - 2136.
[Abstract] [Full Text] [PDF]




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