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Plant Physiol, December 2000, Vol. 124, pp. 1558-1569
The Arabidopsis Genome. An Abundance of Soluble
N-Ethylmaleimide-Sensitive Factor Adaptor Protein
Receptors1
Anton A.
Sanderfoot,
Farhah F.
Assaad, and
Natasha V.
Raikhel*
Departments of Energy Plant Research Laboratory (A.A.S., N.V.R.)
and Biochemistry and Molecular Biology (N.V.R.), Michigan State
University, East Lansing, Michigan 48824; and Genetics Institute,
University of Munich, Maria Ward Strasse 1a, 80638 Munich, Germany
(F.F.A.)
Many factors have been characterized as essential for vesicle
trafficking, including a number of proteins commonly referred to as
soluble N-ethylmaleimide-sensitive factor adaptor
protein receptor (SNARE) components. The Arabidopsis genome contains a remarkable number of SNAREs. In general, the vesicle fusion machinery appears highly conserved. However, whereas some classes of yeast and
mammalian genes appear to be lacking in Arabidopsis, this small plant
genome has gene families not found in other eukaryotes. Very little is
known about the precise function of plant SNAREs. By contrast, the
intracellular localization of and interactions between a large number
of plant SNAREs have been determined, and these data are discussed in
light of the phylogenetic analysis.
1
A.A.S. was supported by a National Institute of
Health postdoctoral fellowship (no. GM 18861). F.F.A. was supported by
the Deutsche Forschungsgemeinschaft (grant no. AS110/2-1). N.V.R. was
supported by funds from the U.S. Department of Energy (grant no.
DE-FG02-91ER-20021) and by the National Science Foundation (grant
no. MCB-9507030).
*
Corresponding author; e-mail nraikhel{at}msu.edu; fax
517- 353-9168.
© 2000 American Society of Plant Physiologists
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|
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|
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|
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|
|
|
|
|
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|
|
|
|
|
|
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|
|
|
|
|
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[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
M. Surpin, H. Zheng, M. T. Morita, C. Saito, E. Avila, J. J. Blakeslee, A. Bandyopadhyay, V. Kovaleva, D. Carter, A. Murphy, et al.
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15(12):
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|
|
|
|
|
|
|
T. S. Nuhse, T. Boller, and S. C. Peck
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278(46):
45248 - 45254.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
U. NEUMANN, F. BRANDIZZI, and C. HAWES
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92(2):
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[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
P. V. Minorsky
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132(2):
726 - 727.
[Full Text]
[PDF]
|
|
|
|
|
|
|
P. Wick, X. Gansel, C. Oulevey, V. Page, I. Studer, M. Durst, and L. Sticher
The Expression of the t-SNARE AtSNAP33 Is Induced by Pathogens and Mechanical Stimulation
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May 1, 2003;
132(1):
343 - 351.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
M. B. Sorensen, U. Mayer, W. Lukowitz, H. Robert, P. Chambrier, G. Jurgens, C. Somerville, L. Lepiniec, and F. Berger
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March 14, 2003;
129(24):
5567 - 5576.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
E. Rojo, J. Zouhar, V. Kovaleva, S. Hong, and N. V. Raikhel
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Mol. Biol. Cell,
February 1, 2003;
14(2):
361 - 369.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
J. Zhu, Z. Gong, C. Zhang, C.-P. Song, B. Damsz, G. Inan, H. Koiwa, J.-K. Zhu, P. M. Hasegawa, and R. A. Bressan
OSM1/SYP61: A Syntaxin Protein in Arabidopsis Controls Abscisic Acid-Mediated and Non-Abscisic Acid-Mediated Responses to Abiotic Stress
PLANT CELL,
December 1, 2002;
14(12):
3009 - 3028.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
D. M. Rancour, C. E. Dickey, S. Park, and S. Y. Bednarek
Characterization of AtCDC48. Evidence for Multiple Membrane Fusion Mechanisms at the Plane of Cell Division in Plants
Plant Physiology,
November 1, 2002;
130(3):
1241 - 1253.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
Y.-B. Li, S. W. Rogers, Y. C. Tse, S. W. Lo, S. S. M. Sun, G.-Y. Jauh, and L. Jiang
BP-80 and Homologs are Concentrated on Post-Golgi, Probable Lytic Prevacuolar Compartments
Plant Cell Physiol.,
July 15, 2002;
43(7):
726 - 742.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
H. Zheng, S. Y. Bednarek, A. A. Sanderfoot, J. Alonso, J. R. Ecker, and N. V. Raikhel
NPSN11 Is a Cell Plate-Associated SNARE Protein That Interacts with the Syntaxin KNOLLE
Plant Physiology,
June 1, 2002;
129(2):
530 - 539.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
J. B. Dacks and W. F. Doolittle
Novel syntaxin gene sequences from Giardia, Trypanosoma and algae: implications for the ancient evolution of the eukaryotic endomembrane system
J. Cell Sci.,
April 15, 2002;
115(8):
1635 - 1642.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
J. E. Carette, J. Verver, J. Martens, T. van Kampen, J. Wellink, and A. van Kammen
Characterization of plant proteins that interact with cowpea mosaic virus '60K' protein in the yeast two-hybrid system
J. Gen. Virol.,
April 1, 2002;
83(4):
885 - 893.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
A. Volker, Y.-D. Stierhof, and G. Jurgens
Cell cycle-independent expression of the Arabidopsis cytokinesis-specific syntaxin KNOLLE results in mistargeting to the plasma membrane and is not sufficient for cytokinesis
J. Cell Sci.,
March 10, 2002;
114(16):
3001 - 3012.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
D. Geelen, B. Leyman, H. Batoko, G.-P. Di Sansebastiano, I. Moore, and M. R. Blatt
The Abscisic Acid-Related SNARE Homolog NtSyr1 Contributes to Secretion and Growth: Evidence from Competition with Its Cytosolic Domain
PLANT CELL,
February 1, 2002;
14(2):
387 - 406.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
C. Ritzenthaler, A. Nebenfuhr, A. Movafeghi, C. Stussi-Garaud, L. Behnia, P. Pimpl, L. A. Staehelin, and D. G. Robinson
Reevaluation of the Effects of Brefeldin A on Plant Cells Using Tobacco Bright Yellow 2 Cells Expressing Golgi-Targeted Green Fluorescent Protein and COPI Antisera
PLANT CELL,
January 1, 2002;
14(1):
237 - 261.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
A. Levine, B. Belenghi, H. Damari-Weisler, and D. Granot
Vesicle-associated Membrane Protein of Arabidopsis Suppresses Bax-induced Apoptosis in Yeast Downstream of Oxidative Burst
J. Biol. Chem.,
November 30, 2001;
276(49):
46284 - 46289.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
J. B. Jin, Y. A Kim, S. J. Kim, S. H. Lee, D. H. Kim, G.-W. Cheong, and I. Hwang
A New Dynamin-Like Protein, ADL6, Is Involved in Trafficking from the trans-Golgi Network to the Central Vacuole in Arabidopsis
PLANT CELL,
July 1, 2001;
13(7):
1511 - 1526.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
A. Vitale
Uncovering Secretory Secrets: Inhibition of Endoplasmic Reticulum (ER) Glucosidases Suggests a Critical Role for ER Quality Control in Plant Growth and Development
PLANT CELL,
June 1, 2001;
13(6):
1260 - 1262.
[Full Text]
[PDF]
|
|
|
|
|
|
|
F. F. Assaad
Plant Cytokinesis. Exploring the Links
Plant Physiology,
June 1, 2001;
126(2):
509 - 516.
[Full Text]
[PDF]
|
|
|
|
|
|
|
A. A. Sanderfoot, M. Pilgrim, L. Adam, and N. V. Raikhel
Disruption of Individual Members of Arabidopsis Syntaxin Gene Families Indicates Each Has Essential Functions
PLANT CELL,
March 1, 2001;
13(3):
659 - 666.
[Abstract]
[Full Text]
|
|
|
|
|
|
|
F. F. Assaad, Y. Huet, U. Mayer, and G. Jurgens
The Cytokinesis Gene KEULE Encodes a Sec1 Protein That Binds the Syntaxin KNOLLE
J. Cell Biol.,
February 5, 2001;
152(3):
531 - 544.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
N. Boudet, S. Aubourg, C. Toffano-Nioche, M. Kreis, and A. Lecharny
Evolution of Intron/Exon Structure of DEAD Helicase Family Genes in Arabidopsis, Caenorhabditis, and Drosophila
Genome Res.,
December 1, 2001;
11(12):
2101 - 2114.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
M. Heese, X. Gansel, L. Sticher, P. Wick, M. Grebe, F. Granier, and G. Jurgens
Functional characterization of the KNOLLE-interacting t-SNARE AtSNAP33 and its role in plant cytokinesis
J. Cell Biol.,
October 15, 2001;
155(2):
239 - 250.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
T. Kato, M. T. Morita, H. Fukaki, Y. Yamauchi, M. Uehara, M. Niihama, and M. Tasaka
SGR2, a Phospholipase-Like Protein, and ZIG/SGR4, a SNARE, Are Involved in the Shoot Gravitropism of Arabidopsis
PLANT CELL,
January 1, 2002;
14(1):
33 - 46.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
|
|
Y. Li, C. P. Darley, V. Ongaro, A. Fleming, O. Schipper, S. L. Baldauf, and S. J. McQueen-Mason
Plant Expansins Are a Complex Multigene Family with an Ancient Evolutionary Origin
Plant Physiology,
March 1, 2002;
128(3):
854 - 864.
[Abstract]
[Full Text]
[PDF]
|
|
|
|
|
