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Plant Physiol, August 2001, Vol. 126, pp. 1459-1470

Physiological and Molecular Biological Characterization of Intracellular Carbonic Anhydrase from the Marine Diatom Phaeodactylum tricornutum1

Dan Satoh,2 Yasutaka Hiraoka,2 Brian Colman,3 and Yusuke Matsuda*

Department of Chemistry, Kwansei-Gakuin University, 1-1-155 Uegahara, Nishinomiya 662-8501, Japan

A single intracellular carbonic anhydrase (CA) was detected in air-grown and, at reduced levels, in high CO2-grown cells of the marine diatom Phaeodactylum tricornutum (UTEX 642). No external CA activity was detected irrespective of growth CO2 conditions. Ethoxyzolamide (0.4 mM), a CA-specific inhibitor, severely inhibited high-affinity photosynthesis at low concentrations of dissolved inorganic carbon, whereas 2 mM acetazolamide had little effect on the affinity for dissolved inorganic carbon, suggesting that internal CA is crucial for the operation of a carbon concentrating mechanism in P. tricornutum. Internal CA was purified 36.7-fold of that of cell homogenates by ammonium sulfate precipitation, and two-step column chromatography on diethylaminoethyl-sephacel and p-aminomethylbenzene sulfone amide agarose. The purified CA was shown, by SDS-PAGE, to comprise an electrophoretically single polypeptide of 28 kD under both reduced and nonreduced conditions. The entire sequence of the cDNA of this CA was obtained by the rapid amplification of cDNA ends method and indicated that the cDNA encodes 282 amino acids. Comparison of this putative precursor sequence with the N-terminal amino acid sequence of the purified CA indicated that it included a possible signal sequence of up to 46 amino acids at the N terminus. The mature CA was found to consist of 236 amino acids and the sequence was homologous to beta -type CAs. Even though the zinc-ligand amino acid residues were shown to be completely conserved, the amino acid residues that may constitute a CO2-binding site appeared to be unique among the beta -CAs so far reported.


1 This work was supported in part by a grant from Invitation for Research Institute of Innovative Technology for the Earth Research Proposals and in part by Kwansei-Gakuin University (Special Grant for Individual Researcher to Y.M. and a visiting professorship to B.C.).

2 These authors contributed equally to the paper.

3 Present address: Department of Biology, York University, 4700 Keele Street, Toronto, Canada M3J 1P3.

* Corresponding author; e-mail yusuke{at}kwansei.ac.jp; fax 81-798-51-0914.

© 2001 American Society of Plant Physiologists



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