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Plant Physiol, September 2001, Vol. 127, pp. 159-172

Regulation of the Arabidopsis Transcriptome by Oxidative Stress

Radhika Desikan, Soheila A.-H.-Mackerness,1 John T. Hancock, and Steven J. Neill*

Centre for Research in Plant Science, University of the West of England, Bristol, Coldharbour Lane, Bristol BS16 1QY, United Kingdom (R.D., J.T.H., S.J.N.); and Department of Plant Genetics and Biotechnology, Horticulture Research International, Wellesbourne, Warwick CV35 9EF, United Kingdom (S.A.-H.-M.)

Oxidative stress, resulting from an imbalance in the accumulation and removal of reactive oxygen species such as hydrogen peroxide (H2O2), is a challenge faced by all aerobic organisms. In plants, exposure to various abiotic and biotic stresses results in accumulation of H2O2 and oxidative stress. Increasing evidence indicates that H2O2 functions as a stress signal in plants, mediating adaptive responses to various stresses. To analyze cellular responses to H2O2, we have undertaken a large-scale analysis of the Arabidopsis transcriptome during oxidative stress. Using cDNA microarray technology, we identified 175 non-redundant expressed sequence tags that are regulated by H2O2. Of these, 113 are induced and 62 are repressed by H2O2. A substantial proportion of these expressed sequence tags have predicted functions in cell rescue and defense processes. RNA-blot analyses of selected genes were used to verify the microarray data and extend them to demonstrate that other stresses such as wilting, UV irradiation, and elicitor challenge also induce the expression of many of these genes, both independently of, and, in some cases, via H2O2.


1 Present address: Department of Environment, Food and Rural Affairs, Room 701 Cromwell House, Dean Stanley Street, Westminster, London SW1P 3JH, UK.

* Corresponding author; e-mail steven.neill{at}uwe.ac.uk; fax 44-117-3442904.

© 2001 American Society of Plant Physiologists



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Plant CellHome page
H. Yoshioka, N. Numata, K. Nakajima, S. Katou, K. Kawakita, O. Rowland, J. D. G. Jones, and N. Doke
Nicotiana benthamiana gp91phox Homologs NbrbohA and NbrbohB Participate in H2O2 Accumulation and Resistance to Phytophthora infestans
PLANT CELL, March 1, 2003; 15(3): 706 - 718.
[Abstract] [Full Text] [PDF]


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Plant Physiol.Home page
J. B. Rossel, I. W. Wilson, and B. J. Pogson
Global Changes in Gene Expression in Response to High Light in Arabidopsis
Plant Physiology, November 1, 2002; 130(3): 1109 - 1120.
[Abstract] [Full Text] [PDF]


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Proc. Natl. Acad. Sci. USAHome page
S. Porfirova, E. Bergmuller, S. Tropf, R. Lemke, and P. Dormann
Isolation of an Arabidopsis mutant lacking vitamin E and identification of a cyclase essential for all tocopherol biosynthesis
PNAS, September 17, 2002; 99(19): 12495 - 12500.
[Abstract] [Full Text] [PDF]


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Proc. Natl. Acad. Sci. USAHome page
E. Vranova, S. Atichartpongkul, R. Villarroel, M. Van Montagu, D. Inze, and W. Van Camp
Comprehensive analysis of gene expression in Nicotiana tabacum leaves acclimated to oxidative stress
PNAS, August 6, 2002; 99(16): 10870 - 10875.
[Abstract] [Full Text] [PDF]


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Plant CellHome page
S. Fowler and M. F. Thomashow
Arabidopsis Transcriptome Profiling Indicates That Multiple Regulatory Pathways Are Activated during Cold Acclimation in Addition to the CBF Cold Response Pathway
PLANT CELL, August 1, 2002; 14(8): 1675 - 1690.
[Abstract] [Full Text] [PDF]


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J Exp BotHome page
E. Vranova, D. Inze, and F. Van Breusegem
Signal transduction during oxidative stress
J. Exp. Bot., May 15, 2002; 53(372): 1227 - 1236.
[Abstract] [Full Text] [PDF]


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J Exp BotHome page
S. J. Neill, R. Desikan, A. Clarke, R. D. Hurst, and J. T. Hancock
Hydrogen peroxide and nitric oxide as signalling molecules in plants
J. Exp. Bot., May 15, 2002; 53(372): 1237 - 1247.
[Abstract] [Full Text] [PDF]


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Plant CellHome page
L. Xiong, K. S. Schumaker, and J.-K. Zhu
Cell Signaling during Cold, Drought, and Salt Stress
PLANT CELL, May 1, 2002; 14(90001): S165 - 183.
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