|
Plant Physiol, December 2001, Vol. 127, pp. 1607-1616
Circadian Clock-Regulated Expression of Phytochrome and
Cryptochrome Genes in Arabidopsis1
Réka
Tóth,
Éva
Kevei,
Anthony
Hall,
Andrew J.
Millar,
Ferenc
Nagy, and
László
Kozma-Bognár*
Institute of Plant Biology, Biological Research Center of
the Hungarian Academy of Sciences, P.O. Box 521, H-6701 Szeged,
Hungary (R.T., É.K., F.N., L.K.-B.); and Department of Biological
Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom
(A.H., A.J.M.)
Many physiological and biochemical processes in plants
exhibit endogenous rhythms with a period of about 24 h. Endogenous oscillators called circadian clocks regulate these rhythms. The circadian clocks are synchronized to the periodic environmental changes
(e.g. day/night cycles) by specific stimuli; among these, the most important is the light. Photoreceptors, phytochromes, and
cryptochromes are involved in setting the clock by transducing the
light signal to the central oscillator. In this work, we analyzed the
spatial, temporal, and long-term light-regulated expression patterns of
the Arabidopsis phytochrome (PHYA to
PHYE) and cryptochrome (CRY1 and
CRY2) promoters fused to the luciferase
(LUC+) reporter gene. The results
revealed new details of the tissue-specific expression and light
regulation of the PHYC and CRY1 and
2 promoters. More importantly, the data obtained
demonstrate that the activities of the
promoter::LUC+ constructs,
with the exception of
PHYC::LUC+, display
circadian oscillations under constant conditions. In addition, it is
shown by measuring the mRNA abundance of PHY and CRY genes under constant light conditions that the
circadian control is also maintained at the level of mRNA accumulation.
These observations indicate that the plant circadian clock controls the
expression of these photoreceptors, revealing the formation of a new
regulatory loop that could modulate gating and resetting of the
circadian clock.
1
This work was supported by the Hungarian
Scientific Research Fund (grant nos. F-029163 to L.K.-B. and T-032565
to F.N.), by the Howard Hughes Medical Institute (grant no. 55000325 to
F.N.), by the Human Frontier Research Program (to A.J.M. and F.N.), and by the Biotechnology and Biological Sciences Research Council (grant
no. G08667 to A.J.M.).
*
Corresponding author; e-mail
kozmab{at}nucleus.szbk.u-szeged.hu; fax 36-62-433-434.
© 2001 American Society of Plant Physiologists
This article has been cited by other articles:

|
 |

|
 |
 
P. Xu, Y. Xiang, H. Zhu, H. Xu, Z. Zhang, C. Zhang, L. Zhang, and Z. Ma
Wheat Cryptochromes: Subcellular Localization and Involvement in Photomorphogenesis and Osmotic Stress Responses
Plant Physiology,
February 1, 2009;
149(2):
760 - 774.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
Q. Zhang, H. Li, R. Li, R. Hu, C. Fan, F. Chen, Z. Wang, X. Liu, Y. Fu, and C. Lin
Association of the circadian rhythmic expression of GmCRY1a with a latitudinal cline in photoperiodic flowering of soybean
PNAS,
December 30, 2008;
105(52):
21028 - 21033.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
X. Yu, J. Klejnot, X. Zhao, D. Shalitin, M. Maymon, H. Yang, J. Lee, X. Liu, J. Lopez, and C. Lin
Arabidopsis Cryptochrome 2 Completes Its Posttranslational Life Cycle in the Nucleus
PLANT CELL,
October 1, 2007;
19(10):
3146 - 3156.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
E. Kevei, E. Schafer, and F. Nagy
Light-regulated nucleo-cytoplasmic partitioning of phytochromes
J. Exp. Bot.,
September 27, 2007;
(2007)
erm145v1.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. A. Oliverio, M. Crepy, E. L. Martin-Tryon, R. Milich, S. L. Harmer, J. Putterill, M. J. Yanovsky, and J. J. Casal
GIGANTEA Regulates Phytochrome A-Mediated Photomorphogenesis Independently of Its Role in the Circadian Clock
Plant Physiology,
May 1, 2007;
144(1):
495 - 502.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Endo, N. Mochizuki, T. Suzuki, and A. Nagatani
CRYPTOCHROME2 in Vascular Bundles Regulates Flowering in Arabidopsis
PLANT CELL,
January 1, 2007;
19(1):
84 - 93.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Chatterjee, P. Sharma, and J. P. Khurana
Cryptochrome 1 from Brassica napus Is Up-Regulated by Blue Light and Controls Hypocotyl/Stem Growth and Anthocyanin Accumulation
Plant Physiology,
May 1, 2006;
141(1):
61 - 74.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
C. R. McClung
Plant circadian rhythms.
PLANT CELL,
April 1, 2006;
18(4):
792 - 803.
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. C. Froehlich, B. Noh, R. D. Vierstra, J. Loros, and J. C. Dunlap
Genetic and Molecular Analysis of Phytochromes from the Filamentous Fungus Neurospora crassa
Eukaryot. Cell,
December 1, 2005;
4(12):
2140 - 2152.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. Viczian, S. Kircher, E. Fejes, A. J. Millar, E. Schafer, L. Kozma-Bognar, and F. Nagy
Functional Characterization of Phytochrome Interacting Factor 3 for the Arabidopsis thaliana Circadian Clockwork
Plant Cell Physiol.,
October 1, 2005;
46(10):
1591 - 1602.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Endo, S. Nakamura, T. Araki, N. Mochizuki, and A. Nagatani
Phytochrome B in the Mesophyll Delays Flowering by Suppressing FLOWERING LOCUS T Expression in Arabidopsis Vascular Bundles
PLANT CELL,
July 1, 2005;
17(7):
1941 - 1952.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
T. Usami, N. Mochizuki, M. Kondo, M. Nishimura, and A. Nagatani
Cryptochromes and Phytochromes Synergistically Regulate Arabidopsis Root Greening under Blue Light
Plant Cell Physiol.,
December 15, 2004;
45(12):
1798 - 1808.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. Ichikawa, M. Sugita, T. Imaizumi, M. Wada, and S. Aoki
Differential Expression on a Daily Basis of Plastid Sigma Factor Genes from the Moss Physcomitrella patens. Regulatory Interactions among PpSig5, the Circadian Clock, and Blue Light Signaling Mediated by Cryptochromes
Plant Physiology,
December 1, 2004;
136(4):
4285 - 4298.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. Bauer, A. Viczian, S. Kircher, T. Nobis, R. Nitschke, T. Kunkel, K. C.S. Panigrahi, E. Adam, E. Fejes, E. Schafer, et al.
Constitutive Photomorphogenesis 1 and Multiple Photoreceptors Control Degradation of Phytochrome Interacting Factor 3, a Transcription Factor Required for Light Signaling in Arabidopsis
PLANT CELL,
June 1, 2004;
16(6):
1433 - 1445.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. E. Somers, W.-Y. Kim, and R. Geng
The F-Box Protein ZEITLUPE Confers Dosage-Dependent Control on the Circadian Clock, Photomorphogenesis, and Flowering Time
PLANT CELL,
March 1, 2004;
16(3):
769 - 782.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
R. Ulm, A. Baumann, A. Oravecz, Z. Mate, E. Adam, E. J. Oakeley, E. Schafer, and F. Nagy
Genome-wide analysis of gene expression reveals function of the bZIP transcription factor HY5 in the UV-B response of Arabidopsis
PNAS,
February 3, 2004;
101(5):
1397 - 1402.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. J. Millar
Input signals to the plant circadian clock
J. Exp. Bot.,
January 2, 2004;
55(395):
277 - 283.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
B. M. Parks
The Red Side of Photomorphogenesis
Plant Physiology,
December 1, 2003;
133(4):
1437 - 1444.
[Full Text]
|
 |
|

|
 |

|
 |
 
S. El-Din El-Assal, C. Alonso-Blanco, A. J.M. Peeters, C. Wagemaker, J. L. Weller, and M. Koornneef
The Role of Cryptochrome 2 in Flowering in Arabidopsis
Plant Physiology,
December 1, 2003;
133(4):
1504 - 1516.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. L. DeBlasio, J. L. Mullen, D. R. Luesse, and R. P. Hangarter
Phytochrome Modulation of Blue Light-Induced Chloroplast Movements in Arabidopsis
Plant Physiology,
December 1, 2003;
133(4):
1471 - 1479.
[Abstract]
[Full Text]
|
 |
|

|
 |

|
 |
 
A. J. Millar
A Suite of Photoreceptors Entrains the Plant Circadian Clock
J Biol Rhythms,
June 1, 2003;
18(3):
217 - 226.
[Abstract]
[PDF]
|
 |
|

|
 |

|
 |
 
W.-Y. Kim, R. Geng, and D. E. Somers
Circadian phase-specific degradation of the F-box protein ZTL is mediated by the proteasome
PNAS,
April 15, 2003;
100(8):
4933 - 4938.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. A. Franklin, U. Praekelt, W. M. Stoddart, O. E. Billingham, K. J. Halliday, and G. C. Whitelam
Phytochromes B, D, and E Act Redundantly to Control Multiple Physiological Responses in Arabidopsis
Plant Physiology,
March 1, 2003;
131(3):
1340 - 1346.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
T. Mockler, H. Yang, X. Yu, D. Parikh, Y.-c. Cheng, S. Dolan, and C. Lin
Regulation of photoperiodic flowering by Arabidopsis photoreceptors
PNAS,
February 18, 2003;
100(4):
2140 - 2145.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
T. P. Michael and C. R. McClung
Phase-Specific Circadian Clock Regulatory Elements in Arabidopsis
Plant Physiology,
October 1, 2002;
130(2):
627 - 638.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
R. A. Sharrock and T. Clack
Patterns of Expression and Normalized Levels of the Five Arabidopsis Phytochromes
Plant Physiology,
September 1, 2002;
130(1):
442 - 456.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
T. Izawa, T. Oikawa, N. Sugiyama, T. Tanisaka, M. Yano, and K. Shimamoto
Phytochrome mediates the external light signal to repress FT orthologs in photoperiodic flowering of rice
Genes & Dev.,
August 1, 2002;
16(15):
2006 - 2020.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
P. A. Salome, T. P. Michael, E. V. Kearns, A. G. Fett-Neto, R. A. Sharrock, and C. R. McClung
The out of phase 1 Mutant Defines a Role for PHYB in Circadian Phase Control in Arabidopsis
Plant Physiology,
August 1, 2002;
129(4):
1674 - 1685.
[Abstract]
[Full Text]
[PDF]
|
 |
|
|
|