Plant Physiol.
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
QUICK SEARCH:   [advanced]


     

Plant Physiology 132:494-505 (2003)
© 2003 American Society of Plant Biologists

This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via CrossRef
Right arrow Citing Articles via Web of Science (55)
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Zhu, Y.
Right arrow Articles by Gelvin, S. B.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Zhu, Y.
Right arrow Articles by Gelvin, S. B.
Agricola
Right arrow Articles by Zhu, Y.
Right arrow Articles by Gelvin, S. B.
RESEARCH PAPERS ON SYSTEMS BIOLOGY/GENOMICS/BIOINFORMATICS

Identification of Arabidopsis rat Mutants

Yanmin Zhu, Jaesung Nam, Jaime M. Humara, Kirankumar S. Mysore, Lan-Ying Lee, Hongbin Cao, Lisa Valentine, Jingling Li, Anthony D. Kaiser, Andrea L. Kopecky, Hau-Hsuan Hwang, Saikat Bhattacharjee, Praveen K. Rao, Tzvi Tzfira, Jyothi Rajagopal, HoChul Yi, Veena, Badam S. Yadav, Yan M. Crane, Kui Lin, Yves Larcher, Matthew J.K. Gelvin, Marnie Knue, Cynthia Ramos, Xiaowen Zhao, Susan J. Davis, Sang-Ic Kim, C.T. Ranjith-Kumar, Yoo-Jin Choi, Vipin K. Hallan, Sudip Chattopadhyay, Xiangzhen Sui, Alicja Ziemienowicz, Ann G. Matthysse, Vitaly Citovsky, Barbara Hohn and Stanton B. Gelvin*

Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907–1392 (Y.Z., J.N., J.M.H., K.S.M., L.-Y.L., H.C., J.L., Ant. D.K., And. L.K., H.-H.H., S.B., P.K.R., J.R., H.Y., V., B.S.Y., Y.M.C., K.L., Y.L., M.J.K.G., M.K., X.Z., S.J.D., S.-I.K., C.T.R.-K., V.K.H., S.C., X.S., S.B.G.); Faculty of Natural Resources and Life Sciences, Dong-A University, Pusan 604–714, South Korea (J.N., Y.-J.C.); Friedrich Miescher-Institut, P.O. Box 2543, Basel CH–4002 Switzerland (L.V., C.R., B.H.); Department of Biochemistry and Cell Biology, State University of New York, Stony Brook, New York 11794–5215 (T.T., V.C.); Faculty of Biotechnology, Jagiellonian University, Gronostajowa 7, PL 30–387 Krakow, Poland (A.Z.); and Department of Biology, University of North Carolina, Chapel Hill, North Carolina 27599–3280 (A.G.M.)

Limited knowledge currently exists regarding the roles of plant genes and proteins in the Agrobacterium tumefaciens-mediated transformation process. To understand the host contribution to transformation, we carried out root-based transformation assays to identify Arabidopsis mutants that are resistant to Agrobacterium transformation (rat mutants). To date, we have identified 126 rat mutants by screening libraries of T-DNA insertion mutants and by using various "reverse genetic" approaches. These mutants disrupt expression of genes of numerous categories, including chromatin structural and remodeling genes, and genes encoding proteins implicated in nuclear targeting, cell wall structure and metabolism, cytoskeleton structure and function, and signal transduction. Here, we present an update on the identification and characterization of these rat mutants.

Article, publication date, and citation information can be found at www.plantphysiol.org/cgi/doi/10.1104/pp.103.020420.

1 The majority of this work was funded by the National Science Foundation (Plant Genome grant no. 99–75715 to S.B.G.). We acknowledge additional support for this work from the sources: the National Science Foundation (Plant Genome grant no. 99–75930 to S.B.G.), the U.S. Department of Agriculture (grant nos. 9801261 and 0191113 to S.B.G.), the Corporation for Plant Biotechnology Research (to S.B.G.), the Biotechnology Research and Development Corporation (to S.B.G.), The Novartis Research Foundation (to B.H.), the National Science Foundation (2010 Program grant no. 0210992 to V.C.), the U.S. Department of Agriculture (grant no. 00–35304–9333 to V.C.), the NIH (grant no. GM50224 to V.C.), the Basic Research Program of the Korea Science & Engineering Foundation (grant no. R05–2000–00170 to J.N.), and the Jagiellonian University (grant no. N–25/CRBW–VII–1/2002 to A.Z.).

* Corresponding author; e-mail gelvin{at}bilbo.bio.purdue.edu; fax 765–496–1496.

Received January 17, 2003; returned for revision March 3, 2003; accepted March 3, 2003.




This article has been cited by other articles:


Home page
 Plant Physiol.Home page
S. B. Gelvin
Agrobacterium in the Genomics Age
Plant Physiology, August 1, 2009; 150(4): 1665 - 1676.
[Full Text] [PDF]

Home page
 Mol PlantHome page
Y. Zheng, X.-W. He, Y.-H. Ying, J.-F. Lu, S. B. Gelvin, and H.-X. Shou
Expression of the Arabidopsis thaliana Histone Gene AtHTA1 Enhances Rice Transformation Efficiency
Mol Plant, July 1, 2009; 2(4): 832 - 837.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
S. Bhattacharjee, L.-Y. Lee, H. Oltmanns, H. Cao, Veena, J. Cuperus, and S. B. Gelvin
IMPa-4, an Arabidopsis Importin {alpha} Isoform, Is Preferentially Involved in Agrobacterium-Mediated Plant Transformation
PLANT CELL, October 1, 2008; 20(10): 2661 - 2680.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
L.-Y. Lee, M. E. Kononov, B. Bassuner, B. R. Frame, K. Wang, and S. B. Gelvin
Novel Plant Transformation Vectors Containing the Superpromoter
Plant Physiology, December 1, 2007; 145(4): 1294 - 1300.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
Y. M. Crane and S. B. Gelvin
RNAi-mediated gene silencing reveals involvement of Arabidopsis chromatin-related genes in Agrobacterium-mediated root transformation
PNAS, September 18, 2007; 104(38): 15156 - 15161.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
A. Anand, A. Krichevsky, S. Schornack, T. Lahaye, T. Tzfira, Y. Tang, V. Citovsky, and K. S. Mysore
Arabidopsis VIRE2 INTERACTING PROTEIN2 Is Required for Agrobacterium T-DNA Integration in Plants
PLANT CELL, May 1, 2007; 19(5): 1695 - 1708.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
C. Hernandez-Blanco, D. X. Feng, J. Hu, A. Sanchez-Vallet, L. Deslandes, F. Llorente, M. Berrocal-Lobo, H. Keller, X. Barlet, C. Sanchez-Rodriguez, et al.
Impairment of Cellulose Synthases Required for Arabidopsis Secondary Cell Wall Formation Enhances Disease Resistance
PLANT CELL, March 1, 2007; 19(3): 890 - 903.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
H. Yi, N. Sardesai, T. Fujinuma, C.-W. Chan, Veena, and S. B. Gelvin
Constitutive Expression Exposes Functional Redundancy between the Arabidopsis Histone H2A Gene HTA1 and Other H2A Gene Family Members
PLANT CELL, July 1, 2006; 18(7): 1575 - 1589.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
J. Li, M. Vaidya, C. White, A. Vainstein, V. Citovsky, and T. Tzfira
Involvement of KU80 in T-DNA integration in plant cells
PNAS, December 27, 2005; 102(52): 19231 - 19236.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
M. Vicre, C. Santaella, S. Blanchet, A. Gateau, and A. Driouich
Root Border-Like Cells of Arabidopsis. Microscopical Characterization and Role in the Interaction with Rhizobacteria
Plant Physiology, June 1, 2005; 138(2): 998 - 1008.
[Abstract] [Full Text] [PDF]

Home page
 Microbiol. Mol. Biol. Rev.Home page
A. Brencic and S. C. Winans
Detection of and Response to Signals Involved in Host-Microbe Interactions by Plant-Associated Bacteria
Microbiol. Mol. Biol. Rev., March 1, 2005; 69(1): 155 - 194.
[Abstract] [Full Text] [PDF]

Home page
 ScienceHome page
C. Somerville, S. Bauer, G. Brininstool, M. Facette, T. Hamann, J. Milne, E. Osborne, A. Paredez, S. Persson, T. Raab, et al.
Toward a Systems Approach to Understanding Plant Cell Walls
Science, December 24, 2004; 306(5705): 2206 - 2211.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
N. A. Eckardt
Host Proteins Guide Agrobacterium-Mediated Plant Transformation
PLANT CELL, November 1, 2004; 16(11): 2837 - 2839.
[Full Text] [PDF]

Home page
 Plant CellHome page
H.-H. Hwang and S. B. Gelvin
Plant Proteins That Interact with VirB2, the Agrobacterium tumefaciens Pilin Protein, Mediate Plant Transformation
PLANT CELL, November 1, 2004; 16(11): 3148 - 3167.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
Y. M. Gaspar, J. Nam, C. J. Schultz, L.-Y. Lee, P. R. Gilson, S. B. Gelvin, and A. Bacic
Characterization of the Arabidopsis Lysine-Rich Arabinogalactan-Protein AtAGP17 Mutant (rat1) That Results in a Decreased Efficiency of Agrobacterium Transformation
Plant Physiology, August 1, 2004; 135(4): 2162 - 2171.
[Abstract] [Full Text] [PDF]

Home page
 J. Bacteriol.Home page
T. Danhorn, M. Hentzer, M. Givskov, M. R. Parsek, and C. Fuqua
Phosphorus Limitation Enhances Biofilm Formation of the Plant Pathogen Agrobacterium tumefaciens through the PhoR-PhoB Regulatory System
J. Bacteriol., July 15, 2004; 186(14): 4492 - 4501.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
H.-W. Zhou, C. Nussbaumer, Y. Chao, and A. DeLong
Disparate Roles for the Regulatory A Subunit Isoforms in Arabidopsis Protein Phosphatase 2A
PLANT CELL, March 1, 2004; 16(3): 709 - 722.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
T. Tzfira and V. Citovsky
The Agrobacterium-Plant Cell Interaction. Taking Biology Lessons from a Bug
Plant Physiology, November 1, 2003; 133(3): 943 - 947.
[Full Text] [PDF]

Home page
 Plant Physiol.Home page
L. Valentine
Agrobacterium tumefaciens and the Plant: The David and Goliath of Modern Genetics
Plant Physiology, November 1, 2003; 133(3): 948 - 955.
[Full Text] [PDF]

Home page
 Plant Physiol.Home page
Y. Zhu, J. Nam, N. C. Carpita, A. G. Matthysse, and S. B. Gelvin
Agrobacterium-Mediated Root Transformation Is Inhibited by Mutation of an Arabidopsis Cellulose Synthase-Like Gene
Plant Physiology, November 1, 2003; 133(3): 1000 - 1010.
[Abstract] [Full Text] [PDF]

Home page
 ScienceHome page
M. T. Nishimura, M. Stein, B.-H. Hou, J. P. Vogel, H. Edwards, and S. C. Somerville
Loss of a Callose Synthase Results in Salicylic Acid-Dependent Disease Resistance
Science, August 15, 2003; 301(5635): 969 - 972.
[Abstract] [Full Text] [PDF]


HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
ASPB Publications PLANT PHYSIOLOGY® THE PLANT CELL
Copyright © 2003 by the American Society of Plant Biologists