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Plant Physiology 132:494-505 (2003)
© 2003 American Society of Plant Biologists

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RESEARCH PAPERS ON SYSTEMS BIOLOGY/GENOMICS/BIOINFORMATICS

Identification of Arabidopsis rat Mutants

Yanmin Zhu, Jaesung Nam, Jaime M. Humara, Kirankumar S. Mysore, Lan-Ying Lee, Hongbin Cao, Lisa Valentine, Jingling Li, Anthony D. Kaiser, Andrea L. Kopecky, Hau-Hsuan Hwang, Saikat Bhattacharjee, Praveen K. Rao, Tzvi Tzfira, Jyothi Rajagopal, HoChul Yi, Veena, Badam S. Yadav, Yan M. Crane, Kui Lin, Yves Larcher, Matthew J.K. Gelvin, Marnie Knue, Cynthia Ramos, Xiaowen Zhao, Susan J. Davis, Sang-Ic Kim, C.T. Ranjith-Kumar, Yoo-Jin Choi, Vipin K. Hallan, Sudip Chattopadhyay, Xiangzhen Sui, Alicja Ziemienowicz, Ann G. Matthysse, Vitaly Citovsky, Barbara Hohn and Stanton B. Gelvin*

Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907–1392 (Y.Z., J.N., J.M.H., K.S.M., L.-Y.L., H.C., J.L., Ant. D.K., And. L.K., H.-H.H., S.B., P.K.R., J.R., H.Y., V., B.S.Y., Y.M.C., K.L., Y.L., M.J.K.G., M.K., X.Z., S.J.D., S.-I.K., C.T.R.-K., V.K.H., S.C., X.S., S.B.G.); Faculty of Natural Resources and Life Sciences, Dong-A University, Pusan 604–714, South Korea (J.N., Y.-J.C.); Friedrich Miescher-Institut, P.O. Box 2543, Basel CH–4002 Switzerland (L.V., C.R., B.H.); Department of Biochemistry and Cell Biology, State University of New York, Stony Brook, New York 11794–5215 (T.T., V.C.); Faculty of Biotechnology, Jagiellonian University, Gronostajowa 7, PL 30–387 Krakow, Poland (A.Z.); and Department of Biology, University of North Carolina, Chapel Hill, North Carolina 27599–3280 (A.G.M.)

Limited knowledge currently exists regarding the roles of plant genes and proteins in the Agrobacterium tumefaciens-mediated transformation process. To understand the host contribution to transformation, we carried out root-based transformation assays to identify Arabidopsis mutants that are resistant to Agrobacterium transformation (rat mutants). To date, we have identified 126 rat mutants by screening libraries of T-DNA insertion mutants and by using various "reverse genetic" approaches. These mutants disrupt expression of genes of numerous categories, including chromatin structural and remodeling genes, and genes encoding proteins implicated in nuclear targeting, cell wall structure and metabolism, cytoskeleton structure and function, and signal transduction. Here, we present an update on the identification and characterization of these rat mutants.

Article, publication date, and citation information can be found at www.plantphysiol.org/cgi/doi/10.1104/pp.103.020420.

1 The majority of this work was funded by the National Science Foundation (Plant Genome grant no. 99–75715 to S.B.G.). We acknowledge additional support for this work from the sources: the National Science Foundation (Plant Genome grant no. 99–75930 to S.B.G.), the U.S. Department of Agriculture (grant nos. 9801261 and 0191113 to S.B.G.), the Corporation for Plant Biotechnology Research (to S.B.G.), the Biotechnology Research and Development Corporation (to S.B.G.), The Novartis Research Foundation (to B.H.), the National Science Foundation (2010 Program grant no. 0210992 to V.C.), the U.S. Department of Agriculture (grant no. 00–35304–9333 to V.C.), the NIH (grant no. GM50224 to V.C.), the Basic Research Program of the Korea Science & Engineering Foundation (grant no. R05–2000–00170 to J.N.), and the Jagiellonian University (grant no. N–25/CRBW–VII–1/2002 to A.Z.).

* Corresponding author; e-mail gelvin{at}bilbo.bio.purdue.edu; fax 765–496–1496.

Received January 17, 2003; returned for revision March 3, 2003; accepted March 3, 2003.




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