Plant Physiol. Illumina
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
QUICK SEARCH:   [advanced]


     

Plant Physiology 136:2621-2632 (2004)
© 2004 American Society of Plant Biologists

This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Supplemental Data
Right arrow A correction has been published
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via CrossRef
Right arrow Citing Articles via Web of Science (891)
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Zimmermann, P.
Right arrow Articles by Gruissem, W.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Zimmermann, P.
Right arrow Articles by Gruissem, W.
Agricola
Right arrow Articles by Zimmermann, P.
Right arrow Articles by Gruissem, W.
BIOINFORMATICS

GENEVESTIGATOR. Arabidopsis Microarray Database and Analysis Toolbox1,[w]

Philip Zimmermann2, Matthias Hirsch-Hoffmann2, Lars Hennig and Wilhelm Gruissem*

Institute of Plant Sciences, Swiss Federal Institute of Technology and Zurich-Basel Plant Science Center, ETH Center, CH–8092 Zurich, Switzerland (P.Z., M.H.-H., L.H., W.G.); and Functional and Genomics Center Zurich, UNI Irchel, Y32 H52, CH–8057 Zurich, Switzerland (W.G.)

High-throughput gene expression analysis has become a frequent and powerful research tool in biology. At present, however, few software applications have been developed for biologists to query large microarray gene expression databases using a Web-browser interface. We present GENEVESTIGATOR, a database and Web-browser data mining interface for Affymetrix GeneChip data. Users can query the database to retrieve the expression patterns of individual genes throughout chosen environmental conditions, growth stages, or organs. Reversely, mining tools allow users to identify genes specifically expressed during selected stresses, growth stages, or in particular organs. Using GENEVESTIGATOR, the gene expression profiles of more than 22,000 Arabidopsis genes can be obtained, including those of 10,600 currently uncharacterized genes. The objective of this software application is to direct gene functional discovery and design of new experiments by providing plant biologists with contextual information on the expression of genes. The database and analysis toolbox is available as a community resource at https://www.genevestigator.ethz.ch.

1 This work was supported by ETH, Strategic Excellence Project 2–74213–02/TH–8/02–2, and by the Functional Genomics Center Zurich.

2 These authors contributed equally to the paper.

[w] The online version of this article contains Web-only data.

www.plantphysiol.org/cgi/doi/10.1104/pp.104.046367.

* Corresponding author; e-mail wilhelm.gruissem{at}ipw.biol.ethz.ch; fax 41–1–632–10–79.

Received May 14, 2004; returned for revision July 12, 2004; accepted July 16, 2004.




This article has been cited by other articles:


Home page
 J. Biol. Chem.Home page
R. Nagy, H. Grob, B. Weder, P. Green, M. Klein, A. Frelet-Barrand, J. K. Schjoerring, C. Brearley, and E. Martinoia
The Arabidopsis ATP-binding Cassette Protein AtMRP5/AtABCC5 Is a High Affinity Inositol Hexakisphosphate Transporter Involved in Guard Cell Signaling and Phytate Storage
J. Biol. Chem., November 27, 2009; 284(48): 33614 - 33622.
[Abstract] [Full Text] [PDF]

Home page
 Mol PlantHome page
C. I. Cazzonelli, A. C. Roberts, M. E. Carmody, and B. J. Pogson
Transcriptional Control of SET DOMAIN GROUP 8 and CAROTENOID ISOMERASE during Arabidopsis Development
Mol Plant, November 17, 2009; (2009) ssp092v1.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
N. Li, L. Yuan, N. Liu, D. Shi, X. Li, Z. Tang, J. Liu, V. Sundaresan, and W.-C. Yang
SLOW WALKER2, a NOC1/MAK21 Homologue, Is Essential for Coordinated Cell Cycle Progression during Female Gametophyte Development in Arabidopsis
Plant Physiology, November 1, 2009; 151(3): 1486 - 1497.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
C. Ren, C. Han, W. Peng, Y. Huang, Z. Peng, X. Xiong, Q. Zhu, B. Gao, and D. Xie
A Leaky Mutation in DWARF4 Reveals an Antagonistic Role of Brassinosteroid in the Inhibition of Root Growth by Jasmonate in Arabidopsis
Plant Physiology, November 1, 2009; 151(3): 1412 - 1420.
[Abstract] [Full Text] [PDF]

Home page
 J Exp BotHome page
D. Moldovan, A. Spriggs, J. Yang, B. J. Pogson, E. S. Dennis, and I. W. Wilson
Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis
J. Exp. Bot., October 8, 2009; (2009) erp296v1.
[Abstract] [Full Text] [PDF]

Home page
 DevelopmentHome page
A. Boisson-Dernier, S. Roy, K. Kritsas, M. A. Grobei, M. Jaciubek, J. I. Schroeder, and U. Grossniklaus
Disruption of the pollen-expressed FERONIA homologs ANXUR1 and ANXUR2 triggers pollen tube discharge
Development, October 1, 2009; 136(19): 3279 - 3288.
[Abstract] [Full Text] [PDF]

Home page
 Genome ResHome page
M. A. Grobei, E. Qeli, E. Brunner, H. Rehrauer, R. Zhang, B. Roschitzki, K. Basler, C. H. Ahrens, and U. Grossniklaus
Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function
Genome Res., October 1, 2009; 19(10): 1786 - 1800.
[Abstract] [Full Text] [PDF]

Home page
 J BiochemHome page
X. Gu, C. J. Wages, K. E. Davis, P. J. Guyett, and M. Bar-Peled
Enzymatic Characterization and Comparison of Various Poaceae UDP-GlcA 4-Epimerase Isoforms
J. Biochem., October 1, 2009; 146(4): 527 - 534.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
K. Ishikawa, T. Ogawa, E. Hirosue, Y. Nakayama, K. Harada, E. Fukusaki, K. Yoshimura, and S. Shigeoka
Modulation of the Poly(ADP-ribosyl)ation Reaction via the Arabidopsis ADP-Ribose/NADH Pyrophosphohydrolase, AtNUDX7, Is Involved in the Response to Oxidative Stress
Plant Physiology, October 1, 2009; 151(2): 741 - 754.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
A. A. Dobritsa, J. Shrestha, M. Morant, F. Pinot, M. Matsuno, R. Swanson, B. L. Moller, and D. Preuss
CYP704B1 Is a Long-Chain Fatty Acid {omega}-Hydroxylase Essential for Sporopollenin Synthesis in Pollen of Arabidopsis
Plant Physiology, October 1, 2009; 151(2): 574 - 589.
[Abstract] [Full Text] [PDF]

Home page
 J. Biol. Chem.Home page
G. Miller, A. Honig, H. Stein, N. Suzuki, R. Mittler, and A. Zilberstein
Unraveling {Delta}1-Pyrroline-5-Carboxylate-Proline Cycle in Plants by Uncoupled Expression of Proline Oxidation Enzymes
J. Biol. Chem., September 25, 2009; 284(39): 26482 - 26492.
[Abstract] [Full Text] [PDF]

Home page
 J. Biol. Chem.Home page
M. Engqvist, M. F. Drincovich, U.-I. Flugge, and V. G. Maurino
Two D-2-Hydroxy-acid Dehydrogenases in Arabidopsis thaliana with Catalytic Capacities to Participate in the Last Reactions of the Methylglyoxal and {beta}-Oxidation Pathways
J. Biol. Chem., September 11, 2009; 284(37): 25026 - 25037.
[Abstract] [Full Text] [PDF]

Home page
 Mol PlantHome page
K. H. Caffall, S. Pattathil, S. E. Phillips, M. G. Hahn, and D. Mohnen
Arabidopsis thaliana T-DNA Mutants Implicate GAUT Genes in the Biosynthesis of Pectin and Xylan in Cell Walls and Seed Testa
Mol Plant, September 2, 2009; (2009) ssp062v1.
[Abstract] [Full Text] [PDF]

Home page
 Mol PlantHome page
M. Mutwil, C. Ruprecht, F. M. Giorgi, M. Bringmann, B. Usadel, and S. Persson
Transcriptional Wiring of Cell Wall-Related Genes in Arabidopsis
Mol Plant, September 1, 2009; 2(5): 1015 - 1024.
[Abstract] [Full Text] [PDF]

Home page
 J Exp BotHome page
J. Guo, J. Wang, L. Xi, W.-D. Huang, J. Liang, and J.-G. Chen
RACK1 is a negative regulator of ABA responses in Arabidopsis
J. Exp. Bot., September 1, 2009; 60(13): 3819 - 3833.
[Abstract] [Full Text] [PDF]

Home page
 J Exp BotHome page
G. Frank, E. Pressman, R. Ophir, L. Althan, R. Shaked, M. Freedman, S. Shen, and N. Firon
Transcriptional profiling of maturing tomato (Solanum lycopersicum L.) microspores reveals the involvement of heat shock proteins, ROS scavengers, hormones, and sugars in the heat stress response
J. Exp. Bot., September 1, 2009; 60(13): 3891 - 3908.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
T.-H. Lee, Y.-K. Kim, T. T. M. Pham, S. I. Song, J.-K. Kim, K. Y. Kang, G. An, K.-H. Jung, D. W. Galbraith, M. Kim, et al.
RiceArrayNet: A Database for Correlating Gene Expression from Transcriptome Profiling, and Its Application to the Analysis of Coexpressed Genes in Rice
Plant Physiology, September 1, 2009; 151(1): 16 - 33.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
V. Joshi and G. Jander
Arabidopsis Methionine {gamma}-Lyase Is Regulated According to Isoleucine Biosynthesis Needs But Plays a Subordinate Role to Threonine Deaminase
Plant Physiology, September 1, 2009; 151(1): 367 - 378.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
A. Hayward, P. Stirnberg, C. Beveridge, and O. Leyser
Interactions between Auxin and Strigolactone in Shoot Branching Control
Plant Physiology, September 1, 2009; 151(1): 400 - 412.
[Abstract] [Full Text] [PDF]

Home page
 Sci SignalHome page
G. Miller, K. Schlauch, R. Tam, D. Cortes, M. A. Torres, V. Shulaev, J. L. Dangl, and R. Mittler
The Plant NADPH Oxidase RBOHD Mediates Rapid Systemic Signaling in Response to Diverse Stimuli
Sci. Signal., August 18, 2009; 2(84): ra45 - ra45.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
M. Seifert, J. Keilwagen, M. Strickert, and I. Grosse
Utilizing gene pair orientations for HMM-based analysis of promoter array ChIP-chip data
Bioinformatics, August 15, 2009; 25(16): 2118 - 2125.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
R. J. Staneloni, M. J. Rodriguez-Batiller, D. Legisa, M. R. Scarpin, A. Agalou, P. D. Cerdan, A. H. Meijer, P. B. F. Ouwerkerk, and J. J. Casal
Bell-like homeodomain selectively regulates the high-irradiance response of phytochrome A
PNAS, August 11, 2009; 106(32): 13624 - 13629.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
B. N. Kidd, C. I. Edgar, K. K. Kumar, E. A. Aitken, P. M. Schenk, J. M. Manners, and K. Kazan
The Mediator Complex Subunit PFT1 Is a Key Regulator of Jasmonate-Dependent Defense in Arabidopsis
PLANT CELL, August 1, 2009; 21(8): 2237 - 2252.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
C. D. Leasure, H. Tong, G. Yuen, X. Hou, X. Sun, and Z.-H. He
ROOT UV-B SENSITIVE2 Acts with ROOT UV-B SENSITIVE1 in a Root Ultraviolet B-Sensing Pathway
Plant Physiology, August 1, 2009; 150(4): 1902 - 1915.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
Z. Yang and J. B. Ohlrogge
Turnover of Fatty Acids during Natural Senescence of Arabidopsis, Brachypodium, and Switchgrass and in Arabidopsis {beta}-Oxidation Mutants
Plant Physiology, August 1, 2009; 150(4): 1981 - 1989.
[Abstract] [Full Text] [PDF]

Home page
 Mol PlantHome page
R. March-Diaz and J. C. Reyes
The Beauty of Being a Variant: H2A.Z and the SWR1 Complex in Plants
Mol Plant, July 1, 2009; 2(4): 565 - 577.
[Abstract] [Full Text] [PDF]

Home page
 J Exp BotHome page
S. Coimbra, M. Costa, B. Jones, M. A. Mendes, and L. G. Pereira
Pollen grain development is compromised in Arabidopsis agp6 agp11 null mutants
J. Exp. Bot., July 1, 2009; 60(11): 3133 - 3142.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
X.-N. Zhang and S. M. Mount
Two Alternatively Spliced Isoforms of the Arabidopsis SR45 Protein Have Distinct Roles during Normal Plant Development
Plant Physiology, July 1, 2009; 150(3): 1450 - 1458.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
G. Canino, E. Bocian, N. Barbezier, M. Echeverria, J. Forner, S. Binder, and A. Marchfelder
Arabidopsis Encodes Four tRNase Z Enzymes
Plant Physiology, July 1, 2009; 150(3): 1494 - 1502.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
E. Giraud, O. Van Aken, L. H.M. Ho, and J. Whelan
The Transcription Factor ABI4 Is a Regulator of Mitochondrial Retrograde Expression of ALTERNATIVE OXIDASE1a
Plant Physiology, July 1, 2009; 150(3): 1286 - 1296.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
G. Wang and R. A. Dixon
Heterodimeric geranyl(geranyl)diphosphate synthase from hop (Humulus lupulus) and the evolution of monoterpene biosynthesis
PNAS, June 16, 2009; 106(24): 9914 - 9919.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
L. Marty, W. Siala, M. Schwarzlander, M. D. Fricker, M. Wirtz, L. J. Sweetlove, Y. Meyer, A. J. Meyer, J.-P. Reichheld, and R. Hell
The NADPH-dependent thioredoxin system constitutes a functional backup for cytosolic glutathione reductase in Arabidopsis
PNAS, June 2, 2009; 106(22): 9109 - 9114.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
J. C. Robbins, W. P. Heller, and M. R. Hanson
A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript
RNA, June 1, 2009; 15(6): 1142 - 1153.
[Abstract] [Full Text] [PDF]

Home page
 Plant Cell PhysiolHome page
S. Okada, M. Nagabuchi, Y. Takamura, T. Nakagawa, K. Shinmyozu, J.-i. Nakayama, and K. Tanaka
Reconstitution of Arabidopsis thaliana SUMO Pathways in E. coli: Functional Evaluation of SUMO Machinery Proteins and Mapping of SUMOylation Sites by Mass Spectrometry
Plant Cell Physiol., June 1, 2009; 50(6): 1049 - 1061.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
J. Torabinejad, J. L. Donahue, B. N. Gunesekera, M. J. Allen-Daniels, and G. E. Gillaspy
VTC4 Is a Bifunctional Enzyme That Affects Myoinositol and Ascorbate Biosynthesis in Plants
Plant Physiology, June 1, 2009; 150(2): 951 - 961.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
Y.-S. Huang and H.-m. Li
Arabidopsis CHLI2 Can Substitute for CHLI1
Plant Physiology, June 1, 2009; 150(2): 636 - 645.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
C. C.C. Chang, I. Slesak, L. Jorda, A. Sotnikov, M. Melzer, Z. Miszalski, P. M. Mullineaux, J. E. Parker, B. Karpinska, and S. Karpinski
Arabidopsis Chloroplastic Glutathione Peroxidases Play a Role in Cross Talk between Photooxidative Stress and Immune Responses
Plant Physiology, June 1, 2009; 150(2): 670 - 683.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
D. Avisar, M. Abu-Abied, E. Belausov, E. Sadot, C. Hawes, and I. A. Sparkes
A Comparative Study of the Involvement of 17 Arabidopsis Myosin Family Members on the Motility of Golgi and Other Organelles
Plant Physiology, June 1, 2009; 150(2): 700 - 709.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
C.-W. Sun, Y.-C. Huang, and H.-Y. Chang
CIA2 Coordinately Up-Regulates Protein Import and Synthesis in Leaf Chloroplasts
Plant Physiology, June 1, 2009; 150(2): 879 - 888.
[Abstract] [Full Text] [PDF]

Home page
 J. Biol. Chem.Home page
R. Kissen and A. M. Bones
Nitrile-specifier Proteins Involved in Glucosinolate Hydrolysis in Arabidopsis thaliana
J. Biol. Chem., May 1, 2009; 284(18): 12057 - 12070.
[Abstract] [Full Text] [PDF]

Home page
 J Exp BotHome page
M. Borg, L. Brownfield, and D. Twell
Male gametophyte development: a molecular perspective
J. Exp. Bot., April 1, 2009; 60(5): 1465 - 1478.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
S. M. Brady and N. J. Provart
Web-Queryable Large-Scale Data Sets for Hypothesis Generation in Plant Biology
PLANT CELL, April 1, 2009; 21(4): 1034 - 1051.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
J. A. Christianson, I. W. Wilson, D. J. Llewellyn, and E. S. Dennis
The Low-Oxygen-Induced NAC Domain Transcription Factor ANAC102 Affects Viability of Arabidopsis Seeds following Low-Oxygen Treatment
Plant Physiology, April 1, 2009; 149(4): 1724 - 1738.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
W. Zhang, R.-G. Zhou, Y.-J. Gao, S.-Z. Zheng, P. Xu, S.-Q. Zhang, and D.-Y. Sun
Molecular and Genetic Evidence for the Key Role of AtCaM3 in Heat-Shock Signal Transduction in Arabidopsis
Plant Physiology, April 1, 2009; 149(4): 1773 - 1784.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
E. B. Speth, L. Imboden, P. Hauck, and S. Y. He
Subcellular Localization and Functional Analysis of the Arabidopsis GTPase RabE
Plant Physiology, April 1, 2009; 149(4): 1824 - 1837.
[Abstract] [Full Text] [PDF]

Home page
 Mol PlantHome page
G. Queval, D. Thominet, H. Vanacker, M. Miginiac-Maslow, B. Gakiere, and G. Noctor
H2O2-Activated Up-Regulation of Glutathione in Arabidopsis Involves Induction of Genes Encoding Enzymes Involved in Cysteine Synthesis in the Chloroplast
Mol Plant, March 1, 2009; 2(2): 344 - 356.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
B. Jung, M. Florchinger, H.-H. Kunz, M. Traub, R. Wartenberg, W. Jeblick, H. E. Neuhaus, and T. Mohlmann
Uridine-Ribohydrolase Is a Key Regulator in the Uridine Degradation Pathway of Arabidopsis
PLANT CELL, March 1, 2009; 21(3): 876 - 891.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
S. Schelbert, S. Aubry, B. Burla, B. Agne, F. Kessler, K. Krupinska, and S. Hortensteiner
Pheophytin Pheophorbide Hydrolase (Pheophytinase) Is Involved in Chlorophyll Breakdown during Leaf Senescence in Arabidopsis
PLANT CELL, March 1, 2009; 21(3): 767 - 785.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
R. Dhawan, H. Luo, A. M. Foerster, S. AbuQamar, H.-N. Du, S. D. Briggs, O. M. Scheid, and T. Mengiste
HISTONE MONOUBIQUITINATION1 Interacts with a Subunit of the Mediator Complex and Regulates Defense against Necrotrophic Fungal Pathogens in Arabidopsis
PLANT CELL, March 1, 2009; 21(3): 1000 - 1019.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
C. Herve, P. Dabos, C. Bardet, A. Jauneau, M. C. Auriac, A. Ramboer, F. Lacout, and D. Tremousaygue
In Vivo Interference with AtTCP20 Function Induces Severe Plant Growth Alterations and Deregulates the Expression of Many Genes Important for Development
Plant Physiology, March 1, 2009; 149(3): 1462 - 1477.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
I. Dangoor, H. Peled-Zehavi, A. Levitan, O. Pasand, and A. Danon
A Small Family of Chloroplast Atypical Thioredoxins
Plant Physiology, March 1, 2009; 149(3): 1240 - 1250.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
S. Depuydt, S. Trenkamp, A. R. Fernie, S. Elftieh, J.-P. Renou, M. Vuylsteke, M. Holsters, and D. Vereecke
An Integrated Genomics Approach to Define Niche Establishment by Rhodococcus fascians
Plant Physiology, March 1, 2009; 149(3): 1366 - 1386.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
P. Rippert, J. Puyaubert, D. Grisollet, L. Derrier, and M. Matringe
Tyrosine and Phenylalanine Are Synthesized within the Plastids in Arabidopsis
Plant Physiology, March 1, 2009; 149(3): 1251 - 1260.
[Abstract] [Full Text] [PDF]

Home page
 DNA ResHome page
W. K. Cho, S. Geimer, and J. Meurer
Cluster Analysis and Comparison of Various Chloroplast Transcriptomes and Genes in Arabidopsis thaliana
DNA Res, February 1, 2009; 16(1): 31 - 44.
[Abstract] [Full Text] [PDF]

Home page
 J Exp BotHome page
C. Cosio and C. Dunand
Specific functions of individual class III peroxidase genes
J. Exp. Bot., February 1, 2009; 60(2): 391 - 408.
[Abstract] [Full Text] [PDF]

Home page
 Plant Cell PhysiolHome page
K. Enami, M. Ichikawa, T. Uemura, N. Kutsuna, S. Hasezawa, T. Nakagawa, A. Nakano, and M. H. Sato
Differential Expression Control and Polarized Distribution of Plasma Membrane-Resident SYP1 SNAREs in Arabidopsis thaliana
Plant Cell Physiol., February 1, 2009; 50(2): 280 - 289.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
J.-Y. Jung, R. Shin, and D. P. Schachtman
Ethylene Mediates Response and Tolerance to Potassium Deprivation in Arabidopsis
PLANT CELL, February 1, 2009; 21(2): 607 - 621.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
L. de Lorenzo, F. Merchan, P. Laporte, R. Thompson, J. Clarke, C. Sousa, and M. Crespi
A Novel Plant Leucine-Rich Repeat Receptor Kinase Regulates the Response of Medicago truncatula Roots to Salt Stress
PLANT CELL, February 1, 2009; 21(2): 668 - 680.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
A. J. Book, J. Smalle, K.-H. Lee, P. Yang, J. M. Walker, S. Casper, J. H. Holmes, L. A. Russo, Z. W. Buzzinotti, P. D. Jenik, et al.
The RPN5 Subunit of the 26s Proteasome Is Essential for Gametogenesis, Sporophyte Development, and Complex Assembly in Arabidopsis
PLANT CELL, February 1, 2009; 21(2): 460 - 478.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
S. Endres and R. Tenhaken
Myoinositol Oxygenase Controls the Level of Myoinositol in Arabidopsis, But Does Not Increase Ascorbic Acid
Plant Physiology, February 1, 2009; 149(2): 1042 - 1049.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
K. Ohyama, M. Suzuki, J. Kikuchi, K. Saito, and T. Muranaka
Dual biosynthetic pathways to phytosterol via cycloartenol and lanosterol in Arabidopsis
PNAS, January 20, 2009; 106(3): 725 - 730.
[Abstract] [Full Text] [PDF]

Home page
 ScienceHome page
P. Bednarek, M. Pislewska-Bednarek, A. Svatos, B. Schneider, J. Doubsky, M. Mansurova, M. Humphry, C. Consonni, R. Panstruga, A. Sanchez-Vallet, et al.
A Glucosinolate Metabolism Pathway in Living Plant Cells Mediates Broad-Spectrum Antifungal Defense
Science, January 2, 2009; 323(5910): 101 - 106.
[Abstract] [Full Text] [PDF]

Home page
 J Exp BotHome page
W. Van den Ende and R. Valluru
Sucrose, sucrosyl oligosaccharides, and oxidative stress: scavenging and salvaging?
J. Exp. Bot., January 1, 2009; 60(1): 9 - 18.
[Abstract] [Full Text] [PDF]

Home page
 Plant Cell PhysiolHome page
Y. Sawada, K. Akiyama, A. Sakata, A. Kuwahara, H. Otsuki, T. Sakurai, K. Saito, and M. Y. Hirai
Widely Targeted Metabolomics Based on Large-Scale MS/MS Data for Elucidating Metabolite Accumulation Patterns in Plants
Plant Cell Physiol., January 1, 2009; 50(1): 37 - 47.
[Abstract] [Full Text] [PDF]

Home page
 Plant Cell PhysiolHome page
Y. Ogata, N. Sakurai, K. Aoki, H. Suzuki, K. Okazaki, K. Saito, and D. Shibata
KAGIANA: An Excel-Based Tool for Retrieving Summary Information on Arabidopsis Genes
Plant Cell Physiol., January 1, 2009; 50(1): 173 - 177.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
J. Luo, C. Fuell, A. Parr, L. Hill, P. Bailey, K. Elliott, S. A. Fairhurst, C. Martin, and A. J. Michael
A Novel Polyamine Acyltransferase Responsible for the Accumulation of Spermidine Conjugates in Arabidopsis Seed
PLANT CELL, January 1, 2009; 21(1): 318 - 333.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
J. C. Schoning, C. Streitner, I. M. Meyer, Y. Gao, and D. Staiger
Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis
Nucleic Acids Res., December 1, 2008; 36(22): 6977 - 6987.
[Abstract] [Full Text] [PDF]

Home page
 DNA ResHome page
A. Fukushima, M. Wada, S. Kanaya, and M. Arita
SVD-based Anatomy of Gene Expressions for Correlation Analysis in Arabidopsis thaliana
DNA Res, December 1, 2008; 15(6): 367 - 374.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
T. Ischebeck, I. Stenzel, and I. Heilmann
Type B Phosphatidylinositol-4-Phosphate 5-Kinases Mediate Arabidopsis and Nicotiana tabacum Pollen Tube Growth by Regulating Apical Pectin Secretion
PLANT CELL, December 1, 2008; 20(12): 3312 - 3330.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
A. L. Schapire, B. Voigt, J. Jasik, A. Rosado, R. Lopez-Cobollo, D. Menzel, J. Salinas, S. Mancuso, V. Valpuesta, F. Baluska, et al.
Arabidopsis Synaptotagmin 1 Is Required for the Maintenance of Plasma Membrane Integrity and Cell Viability
PLANT CELL, December 1, 2008; 20(12): 3374 - 3388.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
L. Palmieri, A. Santoro, F. Carrari, E. Blanco, A. Nunes-Nesi, R. Arrigoni, F. Genchi, A. R. Fernie, and F. Palmieri
Identification and Characterization of ADNT1, a Novel Mitochondrial Adenine Nucleotide Transporter from Arabidopsis
Plant Physiology, December 1, 2008; 148(4): 1797 - 1808.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
H. Eubel, E. H. Meyer, N. L. Taylor, J. D. Bussell, N. O'Toole, J. L. Heazlewood, I. Castleden, I. D. Small, S. M. Smith, and A. H. Millar
Novel Proteins, Putative Membrane Transporters, and an Integrated Metabolic Network Are Revealed by Quantitative Proteomic Analysis of Arabidopsis Cell Culture Peroxisomes
Plant Physiology, December 1, 2008; 148(4): 1809 - 1829.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
K. Loizeau, V. De Brouwer, B. Gambonnet, A. Yu, J.-P. Renou, D. Van Der Straeten, W. E. Lambert, F. Rebeille, and S. Ravanel
A Genome-Wide and Metabolic Analysis Determined the Adaptive Response of Arabidopsis Cells to Folate Depletion Induced by Methotrexate
Plant Physiology, December 1, 2008; 148(4): 2083 - 2095.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
E. A. Ananieva, G. E. Gillaspy, A. Ely, R. N. Burnette, and F. L. Erickson
Interaction of the WD40 Domain of a Myoinositol Polyphosphate 5-Phosphatase with SnRK1 Links Inositol, Sugar, and Stress Signaling
Plant Physiology, December 1, 2008; 148(4): 1868 - 1882.
[Abstract] [Full Text] [PDF]

Home page
 J. Biol. Chem.Home page
F. J. Sandoval, Y. Zhang, and S. Roje
Flavin Nucleotide Metabolism in Plants: MONOFUNCTIONAL ENZYMES SYNTHESIZE FAD IN PLASTIDS
J. Biol. Chem., November 7, 2008; 283(45): 30890 - 30900.
[Abstract] [Full Text] [PDF]

Home page
 Mol PlantHome page
N. Q. Phan, S.-J. Kim, and D. C. Bassham
Overexpression of Arabidopsis Sorting Nexin AtSNX2b Inhibits Endocytic Trafficking to the Vacuole
Mol Plant, November 1, 2008; 1(6): 961 - 976.
[Abstract] [Full Text] [PDF]

Home page
 Mol PlantHome page
M. Dunkel, A. Latz, K. Schumacher, T. Muller, D. Becker, and R. Hedrich
Targeting of Vacuolar Membrane Localized Members of the TPK Channel Family
Mol Plant, November 1, 2008; 1(6): 938 - 949.
[Abstract] [Full Text] [PDF]

Home page
 GeneticsHome page
A. S. Buchovsky, B. Strasser, P. D. Cerdan, and J. J. Casal
Suppression of Pleiotropic Effects of Functional CRYPTOCHROME Genes by TERMINAL FLOWER 1
Genetics, November 1, 2008; 180(3): 1467 - 1474.
[Abstract] [Full Text] [PDF]

Home page
 GeneticsHome page
R. Blanvillain, L. C. Boavida, S. McCormick, and D. W. Ow
EXPORTIN1 Genes Are Essential for Development and Function of the Gametophytes in Arabidopsis thaliana
Genetics, November 1, 2008; 180(3): 1493 - 1500.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
B. Fode, T. Siemsen, C. Thurow, R. Weigel, and C. Gatz
The Arabidopsis GRAS Protein SCL14 Interacts with Class II TGA Transcription Factors and Is Essential for the Activation of Stress-Inducible Promoters
PLANT CELL, November 1, 2008; 20(11): 3122 - 3135.
[Abstract] [Full Text] [PDF]

Home page
 Plant CellHome page
E. Sousa, B. Kost, and R. Malho
Arabidopsis Phosphatidylinositol-4-Monophosphate 5-Kinase 4 Regulates Pollen Tube Growth and Polarity by Modulating Membrane Recycling
PLANT CELL, November 1, 2008; 20(11): 3050 - 3064.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
C. Polge, M. Jossier, P. Crozet, L. Gissot, and M. Thomas
{beta}-Subunits of the SnRK1 Complexes Share a Common Ancestral Function Together with Expression and Function Specificities; Physical Interaction with Nitrate Reductase Specifically Occurs via AKIN{beta}1-Subunit
Plant Physiology, November 1, 2008; 148(3): 1570 - 1582.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
R. Galletti, C. Denoux, S. Gambetta, J. Dewdney, F. M. Ausubel, G. De Lorenzo, and S. Ferrari
The AtrbohD-Mediated Oxidative Burst Elicited by Oligogalacturonides in Arabidopsis Is Dispensable for the Activation of Defense Responses Effective against Botrytis cinerea
Plant Physiology, November 1, 2008; 148(3): 1695 - 1706.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
J. Li, B. G. Hansen, J. A. Ober, D. J. Kliebenstein, and B. A. Halkier
Subclade of Flavin-Monooxygenases Involved in Aliphatic Glucosinolate Biosynthesis
Plant Physiology, November 1, 2008; 148(3): 1721 - 1733.
[Abstract] [Full Text] [PDF]


HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
ASPB Publications PLANT PHYSIOLOGY® THE PLANT CELL
Copyright © 2004 by the American Society of Plant Biologists