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First published online April 27, 2007; 10.1104/pp.106.094060

Plant Physiology 144:1190-1199 (2007)
© 2007 American Society of Plant Biologists

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BIOCHEMICAL PROCESSES AND MACROMOLECULAR STRUCTURES

New Insights into the Unique Structure of the F0F1-ATP Synthase from the Chlamydomonad Algae Polytomella sp. and Chlamydomonas reinhardtii1

Robert van Lis2,*, Guillermo Mendoza-Hernández, Georg Groth and Ariane Atteia2

Institut für Biochemie der Pflanzen, Heinrich Heine Universität Düsseldorf, Duesseldorf D–40225, Germany (R.v.L., G.G.); Departamento de Bioquímica, Facultad de Medicina, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico (G.M-H.); and Laboratoire de Physiologie Cellulaire Végétale, Centre National de la Recherche Scientifique, Commissariat à l'Energie Atomique, Institut National de la Recherche Agronomique, Université Joseph Fourier, F–38054 Grenoble, France (A.A.)

In this study, we investigate the structure of the mitochondrial F0F1-ATP synthase of the colorless alga Polytomella sp. with respect to the enzyme of its green close relative Chlamydomonas reinhardtii. It is demonstrated that several unique features of the ATP synthase in C. reinhardtii are also present in Polytomella sp. The {alpha}- and beta-subunits of the ATP synthase from both algae are highly unusual in that they exhibit extensions at their N- and C-terminal ends, respectively. Several subunits of the Polytomella ATP synthase in the range of 9 to 66 kD have homologs in the green alga but do not have known equivalents as yet in mitochondrial ATP synthases of mammals, plants, or fungi. The largest of these so-called ASA (ATP Synthase-Associated) subunits, ASA1, is shown to be an extrinsic protein. Short heat treatment of isolated Polytomella mitochondria unexpectedly dissociated the otherwise highly stable ATP synthase dimer of 1,600 kD into subcomplexes of 800 and 400 kD, assigned as the ATP synthase monomer and F1-ATPase, respectively. Whereas no ASA subunits were found in the F1-ATPase, all but two were present in the monomer. ASA6 (12 kD) and ASA9 (9 kD), predicted to be membrane bound, were not detected in the monomer and are thus proposed to be involved in the formation or stabilization of the enzyme. A hypothetical configuration of the Chlamydomonad dimeric ATP synthase portraying its unique features is provided to spur further research on this topic.


1 This work was supported by Consejo Nacional de Ciencia y Tecnología (grant no. 41328–Q to G.M.-H.) and by the Centre National de la Recherche Scientifique-Département des Sciences de la Vie (A.A.).

2 Present address: Laboratoire de Bioénergétique et Ingénierie des Protéines, IBSM, CNRS, 31 chemin Joseph Aiguier, 13402, Marseille cedex 20, France.

The author responsible for distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (www.plantphysiol.org) is: Robert van Lis (rvanlis{at}yahoo.fr).

www.plantphysiol.org/cgi/doi/10.1104/pp.106.094060

* Corresponding author; e-mail rvanlis{at}yahoo.fr; fax 33–4–9116–4578.

Received December 3, 2006; accepted April 17, 2007; published April 20, 2007.




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