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Plant Physiol, May 2000, Vol. 123, pp. 287-296
Metabolism of Methanol in Plant Cells. Carbon-13 Nuclear Magnetic
Resonance Studies
Elizabeth
Gout,
Serge
Aubert,
Richard
Bligny,
Fabrice
Rébeillé,
Arthur R.
Nonomura,
Andrew A.
Benson, and
Roland
Douce1 *
Laboratoire de Résonance Magnétique en Biologie
Métabolique, Département de Biologie Moléculaire et
Structurale, CEA-38054, Grenoble cedex 9, France (E.G.); Laboratoire
de Physiologie Cellulaire Végétale, Unité de
Recherche Associée 576 Commissariat à l'Energie
Atomique/Centre National de la Recherche Scientifique/Université
Joseph Fourier, CEA-38054, Grenoble cedex 9, France (S.A., R.B., F.R.,
R.D.); Farlow Herbarium, Harvard University, Cambridge, Massachusetts
02138 (A.R.N.); and Scripps Institution of Oceanography, University of
California, San Diego, California 92093-0202 (A.A.B.)
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ABSTRACT |
Using 13C-NMR, we demonstrate that
[13C]methanol readily entered sycamore (Acer
pseudoplatanus L.) cells to be slowly metabolized to
[3-13C]serine,
[13CH3]methionine, and
[13CH3]phosphatidylcholine. We conclude that
the assimilation of [13C]methanol occurs through the
formation of 13CH3H4Pte-glutamate
(Glu)n and S-adenosyl-methionine, because
feeding plant cells with [3-13CH3]serine, the
direct precursor of
13CH2H4Pte-Glun, can
perfectly mimic [13CH3]methanol for
folate-mediated single-carbon metabolism. On the other hand, the
metabolism of [13C]methanol in plant cells revealed
assimilation of label into a new cellular product that was identified
as
[13CH3]methyl- -D-glucopyranoside.
The de novo synthesis of methyl- -D-glucopyranoside induced by methanol did not require the formation of
13CH3H4Pte-Glun and was
very likely catalyzed by a "transglycosylation" process.
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INTRODUCTION |
Most plants produce and emit
methanol, especially during the early stages of leaf expansion, because
of pectin demethylation (for review, see Fall and Benson, 1996 ), and
this volatile organic compound exits leaves via stomata
(Nemecek-Marshall et al., 1995 ). The proportion of methanol production
that is recycled in plants is not known, but it is obvious that plant
tissues metabolize methanol. Although higher plants likely do not
possess methanol oxidase (this enzyme has so far only been found in
microorganisms), it has been observed that they can convert
[14C]methanol to
14CO2 (Cossins, 1964 ). A
mitochondrial NAD-dependent formate dehydrogenase has been found in
higher plants (Halliwell and Butt, 1974 ; Oliver, 1981 ; Colas des
Francs-Small et al., 1993 ; Hourton-Cabassa et al., 1998 ; Suzuki et al.,
1998 ), and isolated mitochondria from various tissues can oxidize
formate with a tight coupling to an electrogenic translocation of
protons across the inner membrane (Hourton-Cabassa et al., 1998 ).
Formate is also a potential single-carbon source in higher
plants, and several authors have shown that externally added formate is
readily metabolized into Gly and Ser in a process involving the
ATP-dependent synthesis of 10-formyl
5,6,7,8-tetrahydropteroylpolyglutamate (H4Pte-Glun)
(Shingles et al., 1984 ; Prabhu et al., 1996 ). Indeed, a
formyl H4Pte-Glun
synthetase has been purified from spinach leaves (Nour and Rabinowitz,
1991 ); it is mainly associated with the cytosolic fraction (Kirk et
al., 1994 ), but some activity was also detected in mitochondria
(Clandinin and Cossins, 1972 ).
Furthermore, in higher plants 5,10-methylene
H4Pte-Glun, 5,10-methenyl
H4Pte-Glun, and 10-formyl
H4Pte-Glun are readily
interconvertible, thus providing an equilibrium between the pool of C1
units at the formyl and methylene levels of oxidation. These
interconversions are catalyzed by a bi-functional methylene
H4Pte-Glun
dehydrogenase/methenyl H4Pte-Glun cyclohydrolase
(Nour and Rabinowitz, 1991 ; Kirk et al., 1995 ; Chen et al., 1997 ). This
bi-enzyme complex is present in various cell compartments, including
the cytosol (Kirk et al., 1995 ; Chen et al., 1997 ), the mitochondria
(Suzuki and Iwai, 1974 ; Neuburger et al., 1996 ; Chen et al.,
1997 ), and the plastids (Neuburger et al., 1996 ), and this distribution
matches that of Ser hydroxymethyltransferase (Besson et al., 1995 ).
Higher plants therefore possess all of the enzymatic machinery
necessary to catalyze the incorporation of the carbon deriving from
formate (and perhaps from methanol) into methyl groups of various
organic compounds, such as the polar head group of phosphatidylcholine.
Using 13C-NMR, we demonstrate that the carbon
atom of [13C]methanol given to
higher plant cells is readily incorporated into the methyl groups of
numerous molecules, including Met and phosphatidylcholine. We also
demonstrate that methanol induces the de novo synthesis of
methyl- -D-glucopyranoside.
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RESULTS |
Methanol Transport
13C-NMR spectroscopy was performed on intact
sycamore cells to follow methanol import. After a few minutes of
incubation in the presence of various concentrations (0.2-5
mM) of [13C]methanol, we observed
an accumulation of methanol in the cells characterized by its unique
resonance at 49.7 ppm (Fig. 1). At all
the concentrations tested up to 5 mM, methanol was not
transported via a carrier because substrate saturation was not
observed. At 5 mM this alcohol entered very rapidly in
sycamore cells, because in less than 20 s the intracellular
methanol concentration equilibrated with the concentration of methanol
added to the perfusion medium (data not shown). These results indicate
that the plasmalemma membrane did not constitute an obstacle to the
diffusion of methanol. Interestingly, comparison of the increase in the
cell number between control culture and cultures in the presence of 5 mM methanol indicated that methanol at this concentration
did not affect the initial growth rates or maximum density of the
cells. In both cases the cell number doubling time was 40 to 48 h
after a lag phase of approximately 2 d, and the maximum cell
density of sycamore cells was attained after 6 to 7 d of growth,
when the stationary phase was attained, indicating that 5 mM methanol did not affect cell growth parameters.

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Figure 1.
Representative in vivo 13C-NMR spectra
(expanded scale from 10-65 ppm) obtained from sycamore cells. The
spectra, recorded at 20°C, are the results of 3,600 transients (60 min). Cells (9 g wet weight) were taken from a standard exponentially
growing suspension culture, packed in a 25-mm NMR tube as described
previously (Aubert et al., 1996 ), and perfused with a
Mn2+-free culture medium containing 5 mM Suc.
A, Control cells at pH 6.0; B, cells incubated for 2 d with 5 mM [13C]methanol at pH 6.0. Note that the
methyl carbons resonance of phosphatidylcholine is broadened because
this polar lipid is not free to move. In addition, signals from Ser
(C-3, 13C-enriched) and
methyl- -D-glucopyranoside (CH3,
13C-enriched) overlapped in 13C-NMR spectra of
intact cells (compare with Fig. 2). Part of the amino acid and organic
acid methylene groups are shown on expanded scales (magnification,
×8). Peak assignments are as follows: MeG,
[13C]methyl- -D-glucopyranoside; PC,
[13CH3]phosphatidylcholine;
13C-Me, [13C]methanol; cit, citrate; mal,
malate; suc, succinate; Met, [13CH3]Met; S,
Suc.
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Methanol Metabolism
The rate of methanol disappearance in the growth medium measured
by 13C-NMR was linear with time, approximately
0.2 µmol h 1 g 1 wet
weight at a fixed concentration of added methanol (5 mM).
Figure 2 illustrates the changes that
occurred in the 13C-NMR spectra of perchloric
acid extracts obtained from sycamore cells maintained at pH 6.0 for
7 d in a nutrient medium containing 5 mM
[13C]methanol. In the
13C-NMR reference spectra (in which methanol was
omitted from the nutrient solution), the strongest signals were from
glucosyl and fructosyl moieties of Suc and corresponded to an
intracellular concentration of approximately 75 to 80 µmol
g 1 wet weight (Rébeillé et al.,
1985 ). In addition, the major resonances
(13C-natural abundance) in the chemical shift
range of 10 to 80 ppm arose from Glu (at 27.8, 34.4, and 55.6 ppm),
citrate (at 45.7 ppm, C-2 + C-4), malate (at 43.2 ppm, C-3), and
succinate (at 34.9 ppm, C-2 + C-3). Under these conditions, resonances
from Ser and Met were undetectable (threshold of detection around 1-2 µmol/g wet weight). This relatively low sensitivity can be explained by the fact that peaks present in this spectrum result from the 1.1%
naturally occurring 13C of cellular metabolites
normally present at high concentrations in the cell. On the other hand,
cells maintained in a medium containing [13C]methanol (5 mM for 7 d at
pH 6.0) permitted visualization in the chemical range from 10 to 60 ppm, C-3 (13C-enriched) of Ser at 57.3 ppm, and
the methyl carbon (13C-enriched) of Met at 14.7 ppm. [13C]Methanol also triggered the
appearance of a unique resonance centered at 58.0 ppm. To our
knowledge, this resonance has not been reported in plant
extracts. We identified it as originating from the methyl group of
methyl- -D-glucopyranoside, based on the following
observations. First, when adding
methyl- -D-glucopyranoside (13C-natural abundance) to the extract, seven
resonances centered at 58.0 (methyl carbon), 61.6, 70.5, 73.9, 76.5, 76.7, and 104.0 ppm were observed. Under these conditions
the unique resonance at 58.0 ppm (13C-enriched;
pH 7.5) was enhanced. Second, at higher resolution the resonance
centered at 104.0 ppm (C-1, actually 1.1% natural abundance
13C), which is specific to
methyl- -D-glucopyranoside, appeared as two distinct
peaks due to the homonuclear spin-spin carbon interaction (the
2JCC coupling constant,
0.2 Hz, of this doublet is typical of -C-O-CH3; inset of Fig. 2). Interestingly, this resonance was not characterized in the reference spectra (methanol was omitted from the nutrient solution), suggesting that methanol induces the de novo synthesis of
this methyl glucoside. Third, we verified that the considerable accumulation of
[13C]methyl- -D-glucopyranoside
(resonance at 58.0 ppm) was not attributable to the methyl group
of methyl- -D-glucopyranoside,
3-O-methyl-Glc, methyl- -D-galactopyranoside, or
methyl- -D-mannopyranoside. Fourth, the
presence of methyl- -D-glucopyranoside was
confirmed unambiguously by mass spectrometry. Indeed, the
mass spectrum of the trimethylsilyl derivative of this methyl glucoside
from sycamore cell extracts incubated with methanol was identical to
the mass spectrum of the trimethylsilyl derivative of an authentic
sample of methyl- -D-glucopyranoside and
previously published by Dejongh et al. (1969 ; result not shown). Independently of the incubation time, the
13C-enrichment at the methyl position of
methyl- -D-glucopyranoside was found to be
100%. Free methyl- -D-glucopyranoside
accumulated steadily during the first 3 d of incubation with
methanol (Fig. 3). After a 6-d incubation
with 5 mM methanol the concentration of
methyl- -D-glucopyranoside attained in the cell
was approximately 6 µmol/g cell wet weight.

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Figure 2.
Representative in vitro 13C-NMR
spectra (scale from 10-110 ppm) of sycamore cells (perchloric
extract). The spectra, recorded at 20°C, are the results of 900 transients (90 min). Perchloric extracts were prepared from a standard
exponentially growing suspension culture (9 g wet weight) according to
the procedure described in "Materials and Methods." A, Control
cells at pH 6.0; B, cells incubated for 2 d with 5 mM
[13C]methanol at pH 6.0. Note that the C-3 resonance of
Ser is well separated from the resonance of the methyl group of
methyl- -D-glucopyranoside (compare with Fig. 1). The
resonance frequency associated with methanol was not observed in the
perchloric extract (compare with Fig. 1, for an explanation see text).
Inset, 0050 Expanded scale (magnification, ×20) from 103.75 to 104.75 ppm showing the C-1 resonance of
methyl- -D-glucopyranoside (this resonance appeared
as two distinct peaks, for an explanation see text). The
13C-enrichment at the methyl position of
methyl- -D-glucopyranoside was found to be 100%. Part of
the amino acid and organic acid methylene groups are shown on expanded
scales (magnification, ×8). Peak assignments are as follows: MeG,
[13C]methyl- -D-glucopyranoside; cit,
citrate; mal, malate; suc, succinate; Glu, Glu; Met,
[13CH3]Met; S, Suc.
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Figure 3.
Evolution of intracellular
methyl- -D-glucopyranoside in sycamore cells incubated
with 5 mM [13C]methanol at pH 6.0, determined
from in vivo 13C-NMR spectra. Note that
methyl- -D-glucopyranoside was not detected at the
commencement of the incubation period indicating that methanol
triggered the de novo synthesis of this methyl-glucoside (MeG). Results
are the average of three measurements (expressed as µmol/g cell wet
weight) and bars represent SD.
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In vivo 13C-NMR spectra (Fig. 1) obtained from
sycamore cells maintained at pH 6.0 for 7 d in a nutrient medium
containing 5 mM [13C]methanol
showed the resonances frequencies associated with methanol (methanol
was not observed in the perchloric extract owing to its evaporation
during lyophilization, see "Materials and Methods"), Met
(CH3,
13C-enriched), and
methyl- -D-glucopyranoside (CH3,
13C-enriched). Signals from Ser (C-3,
13C-enriched) and
methyl- -D-glucopyranoside (CH3,
13C-enriched) overlapped in
13C-NMR spectra of intact cells (Fig. 1), whereas
they were clearly distinguishable in 13C-NMR
spectra obtained from cell extracts (Fig. 2). No free
formaldehyde and formate were detected. Figure 1 also shows a broad
resonance centered at 54.5 ppm, which was not observed in
13C-NMR spectra obtained from cell extracts and
is very likely attributable to the polar head group of
phosphatidylcholine, the major polar lipid of plant cells. This
resonance was almost undetectable in the control cells (in which
methanol was omitted from the nutrient solution). To characterize
further this unknown compound, a lipid extract (see "Materials and
Methods") was prepared from 9 g of sycamore cells maintained for
7 d in a nutrient medium containing 5 mM
[13C]methanol.
31P- and 13C-NMR Studies of Polar
Lipids
31P-NMR spectroscopy of a cell lipid extract
(for review, see Pearce et al., 1991 ) gave signals from
phosphatidylcholine ( 2.95 ppm), phosphatidylethanolamine ( 2.05
ppm), and phosphatidylinositol ( 2.41 ppm) (Fig.
4). Minor signals centered at 1.50,
1.76, and 2.24 ppm clearly distinguishable from the background
noise, coincide with the phosphate group of phosphatidylglycerol,
diphosphatidylglycerol (cardiolipin), and phosphatidyl-Ser,
respectively. Figure 4 also indicates that the phospholipid composition
(percentage of total polar lipids) of intact cells was not modified by
the presence of [13C]methanol in the growth
medium. The phospholipid composition measured using
31P-NMR (see "Materials and Methods") is in
very good agreement with the phospholipid compositions of a number of
different non-green cells measured by using previous fastidious
biochemical determinations (Bligny and Leguay, 1987 ).

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Figure 4.
Representative in vitro 31P-NMR
spectra (expanded scale from 1 to 4 ppm) of a lipid extract from
sycamore cells. The spectra, recorded at 20°C, are the results of 256 transients (9 min). Lipid extracts were prepared from a standard,
exponentially growing suspension culture (9 g wet weight) according to
the procedure described in "Materials and Methods." A, Control
cells at pH 6.0; B, cells incubated for 7 d with 5 mM
[13C]methanol at pH 6.0. Note that the phospholipid
composition of cells was not modified by the presence of
[13C]methanol in the growth medium. Peak assignments are
as follows: PG, phosphatidylglycerol; DPG, diphosphatidylglycerol
(cardiolipin); PE, phosphatidylethanolamine; PS, phosphatidyl-Ser; PI,
phosphatidylinositol; PC, phosphatidylcholine. The signal at 2.18 ppm
next to PS was not ascribed to a known phospholipid.
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13C-NMR spectroscopy was then performed on a cell
lipid extract prepared in 100% 12C-chloroform.
Figure 5 illustrates the changes that
occurred when the cells were incubated for 7 d in a nutrient
medium containing 5 mM
[13C]methanol. In the absence of exogenous
methanol, we observed a multitude of sharp signals deriving from
methylene and methyl carbons of esterified fatty acids (10-40 ppm),
all of the olephinic carbons belonging to mono- or polyunsaturated
chains (120-135 ppm), and carbonyl carbons of esterified fatty acids
(165-175 ppm). We also observed carbons associated with the polar head groups of lipids, including carbons of the glycerol backbone (peaks at
61.8, 67.5, and 60.9 ppm from C-1, C-2, and C-3, respectively), carbons
of ethanolamine (peaks at 59.9 and 38.8 ppm from C-1 [carbon bound to
a hydroxyl group] and C-2, respectively), and carbons of choline
moiety of phosphatidylcholine (peaks at 57.3, 64.9, and 52.4 ppm from
C-1, C-2, and the three methyl carbons of choline, respectively)
(40-80 ppm). Some general rules for the assignment of the spectra of
polar lipids were found in Pollesollo et al. (1996) .

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Figure 5.
Representative in vitro 13C-NMR
spectra of a lipid extract from sycamore cells. The spectra, recorded
at 20°C, are the results of 900 transients (90 min). Lipid extracts
were prepared from a standard exponentially growing suspension culture
(9 g wet weight) according to the procedure described in "Materials
and Methods." A, Control cells at pH 6.0; B, cells incubated for
7 d with 5 mM [13C]methanol at pH 6.0. Part of the lipid methylene groups are shown on expanded scales
(magnification, ×8). Note the massive label in the methyl carbons of
choline associated with phosphatidylcholine. Peak assignments are as
follows: Gly, C1, C2, C3, carbons of the sn glycerol
backbone (small arrow); Cho, C1, C2, C3, carbons of choline ( ); EA,
C1, C2, carbons of ethanolamine (dot); St, 24-methyl, and 24-ethyl
sterols such as camposterol and sitosterol ( ); 1 to 18, carbon atoms
of esterified fatty acids; COO , carbonyl carbon of
esterified fatty acids; -CH=CH-, olephinic carbons belonging to mono-
or polyunsaturated esterified fatty acids; PHG, carbons associated with
the polar head groups of lipids; -CH2-,
-CH3-, methylene and methyl carbons of esterified fatty
acids.
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After 7 d of incubation in the presence of 5 mM
[13C]methanol, significant changes in the
spectra of cell lipid extract were evident (Fig. 5). Of particular
interest was the massive label in the methyl carbon of choline
associated with phosphatidylcholine. A close examination of an expanded
scale of the spectra between 52.45 and 52.35 ppm showed three distinct
peaks at approximately 52.40, 52.36, and 52.32 ppm, corresponding to
the three methyl carbons of choline coupled to
14N. 13C-Enrichments
(percent) in the methyl carbon of choline in phosphatidylcholine from
sycamore cells grown with [13C]methanol
increased slowly with time up to a steady-state equilibrium (45%)
attained after 1 month of cell culture (Fig.
6). This indicates that at least half of
the methyl carbons of phosphatidylcholine were derived from
[13C]methanol. It is clear that the broad
resonance observed at 54.5 ppm in 13C-NMR spectra
obtained from intact sycamore cells maintained at pH 6.0 for
2 d in a nutrient medium containing 5 mM
[13C]methanol (Fig. 1) was definitively
attributable to the methyl carbons of phosphatidylcholine deriving from
methanol.

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Figure 6.
13C-Enrichment as a function of time
in the methyl carbons of phosphatidylcholine from sycamore cells grown
in the presence of 5 mM [13C]methanol.
Relative 13C-enrichment was obtained for methyl carbon
atoms from 13C-NMR spectra by the standard approach
(phosphatidylcholine sample from sycamore cells with natural
13C-abundance versus phosphatidylcholine from sycamore
cells grown with [13C]methanol). Cells were subcultured
every 7 d in the presence of 5 mM methanol. The rate
constant for choline enrichment roughly corresponds to the rate of
membrane/cell doubling.
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The 2.1-ppm shift observed in comparison with lipid extracts (Fig. 5)
originates from the solvent (water versus chloroform) specific effect.
Figure 5 also indicates a 50% 13C-enrichment in
the C-1 carbon of choline in phosphatidylcholine, whereas no enrichment
(natural abundance) was observed in the C-2 carbon. Likewise, there was
a 50% enrichment in the C-1 carbon of ethanolamine in
phosphatidylethanolamine, whereas no enrichment was observed in the
C-2 carbon. In other words, carbon bound to a hydroxyl group in polar
heads of phospholipids derived partly from
[13C]methanol via Ser and ethanolamine
(Mouillon et al., 1999 ). Finally, the four resonances at 10.1, 21.2, 31.3, and 41.3 ppm coincided with those of 24-methyl and 24-ethyl
sterols such as camposterol and sitosterol. This alkylation of the side
chain is catalyzed by S-adenosyl-Met-dependent
C-methyltransferases, which have been well studied in higher
plants (Bach and Benveniste, 1997 ).
These results altogether strongly suggest that
[13C]methanol added to plant cells is utilized
via folate-mediated single-carbon metabolism, in which
5-13CH3H4Pte-Glun
and S-adenosyl-Met play a key role in a myriad of transmethylation reactions, including the methylation of homo-Cys to
yield Met and the progressive methylation of ethanolamine to yield
choline. However, the specific labeling of
methyl- -D-glucopyranoside by
[13C]methanol remains obscure.
Accumulation and Metabolism of [3-13C]Ser in
Plant Cells
To verify that label incorporation into the methyl groups derived
directly or indirectly from
13CH2
H4Pte-Glun, sycamore cells
were incubated with [3-13C]Ser. It is well
established that the major source of one-carbon units is the 3-carbon
of Ser, derived from glycolytic intermediates in eukaryotic cells
(Schirch, 1984 ). The one-carbon unit is transferred to
H4Pte-Glun in a reaction
catalyzed by Ser hydroxymethyltransferase to generate
CH2
H4Pte-Glun.
Amino acids, including Ser, are transported into plant cells by
proton-coupled symporters that link translocation across the plasma
membrane to the electrochemical potential generated by the
H+-pumping ATPase (Bush, 1998 ).
13C-NMR spectroscopy was performed on intact
sycamore cells incubated for 48 h in a nutrient medium containing
200 µM [3-13C]Ser (results not
shown). The spectra showed the resonance frequency associated with Met
(CH3 group, 13C-enriched)
and phosphatidylcholine (methyl carbons of choline, 13C-enriched). Examination of the resonances in
the chemical shift range from 60 to 50 ppm indicated that feeding
[3-13C]Ser to these cells did not lead to any
detectable accumulation of methyl- -D-glucopyranoside
(CH3, 13C-enriched).
Finally, 13C-NMR spectroscopy performed on lipid
extracts from cells maintained in the presence of
[3-13C]Ser in place of
[13C]methanol indicated considerable
13C-enrichment in the methyl carbons of choline
in phosphatidylcholine and in the methyl and ethyl carbons at
C-24 in plant sterols (results not shown). These results therefore
demonstrated that [3-13C]Ser can perfectly
mimic [13C]methanol for folate-mediated
single-carbon metabolism. These results also demonstrated that the
accumulation of methyl- -D-glucopyranoside (CH3, 13C-enriched)
previously observed with methanol is not associated with the classical
C1 metabolism involving
H4Pte-Glun.
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DISCUSSION |
Our results demonstrate that 5 mM methanol did not
decrease the initial growth rates and did not limit the maximum density of the sycamore cells. We also show that
[13C]methanol readily entered sycamore cells
(likely through aquaporin-like protein) (Maurel, 1997 ) to be slowly
metabolized to [3-13C]Ser,
[13CH3]Met, and
[13CH3]phosphatidylcholine
(proposed metabolic pathway in methanol assimilation see Fig.
7). Cossins (1964) , using various plant tissues, demonstrated that carbon from methanol is also incorporated into Ser and Met. We conclude that the assimilation of
[13CH3]methanol by plant
cells occurs through the formation of
13CH2H4Pte-Glun,
13CH3H4Pte-Glun,
S-adenosyl-Met (a methyl donor in a myriad of
transmethylation reactions), and their subsequent utilization to yield
[3-13C]Ser,
[13CH3]Met, and
[13CH3]phosphatidylcholine
(Figs. 1, 2, and 5; for review, see Rébeillé and
Douce, 1999 ). Assimilation of methanol would therefore require its
prior oxidation, although the exact mechanism by which this oxidation
occurs is unclear. A reasonable possibility would be formation of
formaldehyde followed by its oxidation to formate, a reaction in which
methanol oxidase and formaldehyde dehydrogenase operate in concert.
Indeed, formate is a potential single-carbon source in higher plants
(the ATP-dependent synthesis of 10-formyl H4Pte-Glun from formate
involves the enzyme formyl
H4Pte-Glun synthetase).
However, the pathway for formaldehyde production would have to be
efficiently regulated to prevent this lethal metabolite from
accumulating.

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Figure 7.
Proposed metabolic pathway involved in methanol
assimilation by sycamore cells (the origin of
methyl- -D-glucopyranoside is not indicated). Enzymes: 1, Formyltetrahydrofolate synthetase; 2, methenyl
H4Pte-Glun cyclohydrolase; 3, methylenetetrahydrofolate dehydrogenase; 4, Ser
hydroxymethyltransferase; 5, Gly decarboxylase; 6, methylenetetrahydrofolate reductase; 7, cobalamin-independent Met
synthase; 8, S-adenosyl-Met synthetase; 9, methyltransferase; 10, S-adenosylhomo-Cys hydrolase; 11, cystathionine -synthase and cystathionine -lyase; 12, methanol
oxidase and formaldehyde dehydrogenase.
H4FGlun, 5,6,7,8 tetrahydropteroylpoly-Glu
(tetrahydrofolate); CHOH4F-Glun,
10-formyltetrahydrofolate; CHH4F-Glun,
5,10-methenyltetrahydrofolate;
CH2H4F-Glun,
5,10-methylenetetrahydrofolate;
CH3H4FGlun,
5-methyltetrahydrofolate; SAM, S-adenosyl-Met; SAH,
S-adenosylhomo-Cys. , (13C) carbon.
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Our results also indicate that sycamore cells metabolize methanol
rather slowly (approximately 0.2 µmol h 1
g 1 wet weight), and that some of the carbons
from methanol (30%-60%) are channeled toward
13C-compound synthesis, including Ser, Met,
24-methyl and 24-ethyl sterols, phosphatidylcholine, and
methyl- -D-glucopyranoside (NMR-visible compounds).
Therefore, in sycamore cells an important fraction of the carbon flow
from formate goes into the formyl
H4Pte-Glun synthetase
pathway rather than through the mitochondrial oxidation pathway.
However, several studies have characterized a NAD-dependent formate
dehydrogenase in plant mitochondria, an enzyme that catalyzes the
oxidation of formate to CO2. For example, Oliver
(1981) and Hourton-Cabassa et al. (1998) showed that spinach
mitochondria can oxidize formate rather rapidly. In support of this
observation, preliminary results carried out in our laboratory
indicated that intact sycamore cells can oxidize formate more rapidly
than they metabolize methanol (approximately 1 µmol
h 1 g 1 wet weight versus
0.2 µmol h 1 g 1 wet
weight). Uncertainty therefore arises concerning the partitioning of
formate between the oxidation pathway via formate dehydrogenase and the
assimilation pathway via 10-formyl
H4Pte-Glun. Apparently, according to the tissue, the relative flux of formate toward oxidation and assimilation can fluctuate considerably (Cossins, 1964 ), because there are strong indications for a control of formate oxidation in
plants at the level of gene expression; furthermore, the major site for
such a regulation is probably NAD-dependent formate dehydrogenase (Hourton-Cabassa et al., 1998 ). The poor affinity of formate
dehydrogenase for its substrate (Km formate 1.7 mM; Halliwell, 1974 ), in contrast with
the situation observed for formyl
H4Pte-Glun synthetase
(Km formate 35 µM; Kirk et al., 1995 ), could explain the fact
that part of the carbon deriving from methanol is diverted toward C1 metabolism.
Our studies of the metabolism of [13C]methanol
in sycamore cells revealed assimilation of label into a new cellular
product over several hours of exposure. This compound, characterized as methyl- -D-glucopyranoside, has been identified in rose
petals (Ichimura et al., 1997 ) and in a variety of species belonging to
the genus Geum (Rosacae family) (Bonnier, 1934 ). In the
present study, the assimilation of label from
[13C]methanol into the methyl group of
methyl- -D-glucopyranoside did not require the
formation of
13CH2H4Pte-Glun,
because feeding sycamore cells with [3-13C]Ser,
the direct precursor of
13CH2H4Pte-Glun,
did not lead to the formation of
[13C]methyl- -D-glucopyranoside.
In addition, a 13C-enrichment value close
to 100% was obtained, indicating that the methyl group of
methyl- -D-glucopyranoside derives
exclusively from methanol. This is in contrast to the situation
observed with other compounds synthesized from
[13C]methanol, such as phosphatidylcholine, in
which 13C-enrichments (percent) in the methyl
carbon of choline increase slowly with time up to a steady-state
equilibrium (45%). This is because
[13C]methanol and endogenous unlabeled Ser
compete with one another to feed C1 metabolism.
The results of the present study indicate that a specific
methyltransferase using S-adenosyl-Met is not involved in
methyl- -D-glucopyranoside synthesis. It is not
clear whether the methanol-induced accumulation of
methyl- -D-glucopyranoside in sycamore cells
has physiological significance (e.g. in osmotic stress tolerance).
However, the existence of this metabolite in a variety of species that
have not been fed with methanol speaks for its potential significance. It could be synthesized via an unspecific transglycosylation process catalyzed by a hydrolase in the presence of high concentrations of
glycosyl acceptor (alcohol):
In support of this last suggestion, we have
observed that the substitution of ethanol or glycerol for methanol led
to the formation of an ethyl- -D-glucopyranoside or
glyceryl- -D-glucopyranoside (results not shown). It is
very likely that this transglycosylation reaction predominates
over hydrolysis only when the concentration of suitable alcohol
acceptor in the vicinity of the enzyme is considerable. For example,
the action of a -D-glucosidase (for example, see Crombie
et al., 1998 ) is exactly what might be predicted for an enzyme involved
in such a transglycosylation reaction. Obviously, this putative
hydrolase remains to be characterized; however, this question was not
further pursued in the present study. Finally, preliminary results
carried out in our laboratory indicate that
methyl- -D-glucopyranoside accumulates in the vacuolar compartment and, once synthesized, exhibits a remarkable stability.
 |
MATERIALS AND METHODS |
Cell Preparation
Cell suspensions were chosen in preference to dense tissues to
improve the homogeneity of the incubation conditions (particularly the
extracellular pH and the oxygen supply). Sycamore (Acer
pseudoplatanus L.) cells were grown at 20°C as a suspension
in liquid nutrient medium according to the method of Bligny and Leguay
(1987) . The culture medium, well aerated and containing various
concentrations of [13C]methanol (0.2-5 mM),
was kept at a volume of 0.3 L and stirred continuously at 60 rpm. Under
these conditions the cell number doubling time was 40 to 48 h,
after a lag phase of approximately 2 d, and the maximum cell
density was attained after 7 to 8 d of growth, when the stationary
phase was attained. The cell suspensions were maintained in exponential
growth by subcultures every 7 d. Anaerobiosis resulted in a
failure of the cells to utilize methanol. The cell wet weight was
measured after straining culture aliquots onto a glass-fiber filter.
Chemicals
[13C]Methanol (99%) and
[3-13C]Ser (99%) were purchased from Leman (Saint
Quentin-en-Yvelines, France). To simplify the quantification of
intracellular [13C]-metabolites, the above chemicals were
added in the external medium as 99% labeled.
Methyl- -D-glucopyranoside was purchased from
Sigma-Aldrich (St. Louis).
In Vitro NMR Measurements
Perchloric Acid Extract Preparation
For perchloric acid extraction, cells (9 g wet weight) were
quickly frozen in liquid nitrogen and ground to fine powder with a
mortar and pestle with 1 mL of 70% (v/v) perchloric acid. The frozen
powder was then placed at 10°C and thawed. The thick suspension thus obtained was centrifuged at 15,000g for 10 min to
remove particulate matter, and the supernatant was neutralized with 2 M KHCO3 to approximately pH 5.0. The
supernatant was then centrifuged at 10,000g for 10 min
to remove KClO4, and the resulting supernatant was
lyophilized and stored in liquid nitrogen. This freeze-dried material
containing non-volatile compounds was redissolved in 2.5 mL of water
containing 10% (v/v) 2H2O, neutralized to pH
7.5, and buffered with 50 mM
4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES).
Divalent cations (particularly Mn2+ and Mg2+)
were chelated by the addition of sufficient amounts of
1,2-cyclohexylenedinitrilotetraacetic acid (CDTA) ranging from 50 to
100 µmol depending on the samples. The elimination of paramagnetic
cations is a prerequisite for obtaining sharp resonance signals.
Polar Lipid Extraction
Cells (9 g wet weight) were fixed in boiling water for 5 min to
destroy phospholipase D, and therefore prevent the formation of
phosphatidic acid and phosphatidylmethanol (Douce et al., 1966 ). Cells
were then lyophilized and ground to a fine powder. Polar lipids were
extracted from this freeze-dried material according to the method of
Folch et al. (1957) . The final chloroform layer was evaporated to
dryness in a stream of nitrogen, and the residue thus obtained was
dissolved in 2.5 mL of pure 12C-deuterated chloroform
(lipid extract) to avoid the 13C-resonance (natural
abundance) of chloroform. To get sharp NMR signals (for review, see
Meneses and Glonek, 1988 ), it was necessary to include in the
chloroform extract (final volume 1 mL) small amounts of methanol (150 µL) and water (25 µL).
NMR Measurements
Spectra of neutralized perchloric acid extracts or lipid extract
(see above) were recorded on a NMR spectrometer (AMX 400, Bruker,
Billerica, MA) equipped with a 10-mm multinuclear probe tuned at 162 or
100.6 Mhz for 31P- or 13C-NMR studies,
respectively. The deuterium resonance of 2H2O
was used as a lock signal.
31P-NMR acquisition conditions used were 70°
radiofrequency pulses (15 µs) at 3.6-s intervals; spectral width
8,200 Hz; 1,024 scans; Waltz-16 1H decoupling sequence
(with two levels of decoupling: 1 W during acquisition time, 0.5 W
during delay). Free induction decays were collected as 8K data points,
zero filled to 16K, and processed with a 0.2-Hz exponential line
broadening. 31P-NMR spectra are referenced to methylene
diphosphonic acid, pH 8.9, at 16.38 ppm.
13C-NMR acquisition conditions used were 90°
radiofrequency pulses (19 µs) at 6-s intervals; spectral width 20,000 Hz; 900 scans; Waltz-16 1H decoupling sequence (with two
levels of decoupling: 2.5 W during acquisition time, 0.5 W during
delay). Free induction decays were collected as 16K data points, zero
filled to 32K, and processed with a 0.2-Hz exponential line broadening.
13C-NMR spectra are referenced to hexamethyldisiloxane at
2.7 ppm.
Identification and Quantification of Metabolites and Polar
Lipids
Spectra of standard solutions of Ser, Met,
methyl- -D-glucopyranoside, and various polar lipids at
pH 7.5 were compared with the spectra of extracts (perchloric acid or
lipid extracts) of sycamore cells. The definitive assignments were made
after running a series of spectra obtained by the addition of authentic
compounds to the extracts, according to the methods described in
previous publications (for 31P-NMR, see Roby et al., 1987 ;
for 13C-NMR, see Gout et al., 1993 ). To determine
accurately the total amount of metabolites and various polar lipids in
extracts, a 20-s recycling time was used to obtain fully relaxed
spectra, and calibration of the peak intensities by the addition of
known amounts of the corresponding authentic compounds was performed. The possible errors in the measurements caused by perchloric acid extraction were estimated by adding known amounts of authentic compounds to frozen cells before grinding. For all of the compounds studied, the overall yield of recovery was about 80%. Intracellular concentrations were calculated on the following basis: 1 g of cell
wet weight corresponds to 1 mL of cell volume and roughly 0.13 mL of
cytoplasm and 0.78 mL of vacuole volume.
In Vivo NMR Measurements
To get a better signal-to-noise ratio, an experimental
arrangement was devised to analyze the maximum cell volume and to
optimize the homogeneity of the cell incubation conditions (Aubert et
al., 1996 ). Such a system prevents gas bubbles within the cell mass and
subsequent magnetic field inhomogeneity. The perfusion medium contained
5 mM Suc, 10 mM KNO3, 1 mM KCl, 0.5 mM MgSO4, 0.5 mM Ca(NO3)2, and 100 µM Pi. Spectra were recorded on a spectrometer (AMX 400, Bruker) equipped with a 25-mm probe tuned at 100.6 Mhz for
13C-NMR.
Acquisition conditions used for 13C-NMR were carried out
according to a previous publication (Aubert et al., 1996 ). The
assignments of resonance peaks were carried out according to the
methods described in previous publications (Roberts and Jardetzky,
1981 ; Gout et al., 1993 ; Aubert et al., 1996 ) and from the spectra of
the perchloric acid extracts that contained the soluble,
low-Mr constituents (see above).
Mass Spectrometry
Methyl- -D-glucopyranoside was identified by mass
spectrometry (Quadripolar, Nermag R1010C, Paris, France) after
separation of silylated sugars by HPLC using a capillary column (OV17,
Spiral, Dijon, France).
 |
ACKNOWLEDGMENT |
Provision of various sterol compounds by Prof. Pierre Benveniste
is gratefully acknowledged.
 |
FOOTNOTES |
Received November 3, 1999; accepted February 9, 2000.
1
Present address: Laboratoire de Physiologie
Cellulaire Végétale, Unité de Recherche
Associée 576 Commissariat à l'Energie Atomique/Centre
National de la Recherche Scientifique/Université Joseph Fourier,
Département de Biologie Moléculaire et Structurale, CEA-38054, Grenoble cedex 9, France.
*
Corresponding author; e-mail rdouce{at}cea.fr; fax
33-04-7688-5091.
 |
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