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Plant Physiol, June 2000, Vol. 123, pp. 471-486
Cell Wall and Membrane-Associated
Exo-
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ABSTRACT |
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A
-D-glucan exohydrolase was purified from the cell
walls of developing maize (Zea mays L.) shoots. The cell
wall enzyme preferentially hydrolyzes the non-reducing terminal
glucosyl residue from (1
3)-
-D-glucans, but also
hydrolyzes (1
2)-, (1
6)-, and (1
4)-
-D-glucosyl
units in decreasing order of activity. Polyclonal antisera raised
against the purified exo-
-D-glucanase (ExGase) were used
to select partial-length cDNA clones, and the complete sequence of 622 amino acid residues was deduced from the nucleotide sequences of the
cDNA and a full-length genomic clone. Northern gel-blot analysis
revealed what appeared to be a single transcript, but three distinct
polypeptides were detected in immunogel-blot analyses of the ExGases
extracted from growing coleoptiles. Two polypeptides appear in the cell
wall, where one polypeptide is constitutive, and the second appears at
the time of the maximum rate of elongation and reaches peak activity
after elongation has ceased. The appearance of the second polypeptide
coincides with the disappearance of the mixed-linkage
(1
3),(1
4)-
-D-glucan, whose accumulation is
associated with cell elongation in grasses. The third polypeptide of
the ExGase is an extrinsic protein associated with the exterior surface
of the plasma membrane. Although the activity of the
membrane-associated ExGase is highest against (1
3)-
-D-glucans, the activity against
(1
4)-
-D-glucan linkages is severely attenuated and,
therefore, the enzyme is unlikely to be involved with turnover of the
(1
3),(1
4)-
-D-glucan. We propose three potential
functions for this novel ExGase at the membrane-wall interface.
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INTRODUCTION |
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The cell walls of grasses are
compositionally different from those of all other flowering plants,
and their growth mechanisms may be different as well (Carpita and
Gibeaut, 1993
; Carpita, 1996
). In the commelinoid monocots (Rudall and
Caddick, 1994
), the major cross-linking polymers are feruloylated
glucuronoarabinoxylans, and this framework is interlaced with much
lower amounts of pectic substances than in dicots (Carpita, 1996
;
Jarvis et al., 1988
). The (1
3),(1
4)-
-D-glucans
(
-glucans) are found only in the Poales, a single order within the
commelinoids that includes cereals and other grass species (Dahlgren et
al., 1985
; Smith and Harris, 1999
).
-Glucan is unbranched, and about
90% of the polymer consists of cellotriosyl and cellotetraosyl units
in a ratio of about 2.5:1, connected by single (1
3)-
linkages.
The remainder comprises longer runs of cellodextrins interspersed along
the polymer and also connected by single (1
3)-
linkages (Wood et
al., 1994
).
-Glucans are not synthesized in dividing cells, but
accumulate specifically during cell enlargement and are then hydrolyzed
extensively when growth ceases (Carpita and Gibeaut, 1993
).
Dissociation of cross-linking glycans from cellulose by expansins
(Cosgrove, 1997
) or the cleavage and religation of xyloglucans by
xyloglucan endotransglycosylases (XETs; Nishitani, 1997
) have been
considered to be the principal mechanical determinants of cell
expansion in dicots. However, the appearance and disappearance of the
developmental stage-specific
-glucan during seedling growth in
grasses indicate that the growth mechanism might be different in these species.
Over 3 decades ago, Lee et al. (1967)
demonstrated that the walls of
grasses were capable of autolysis, a term they coined to describe the
self-hydrolysis of native walls in vitro and release of Glc into an
incubation medium. We report here on the cloning of a gene that encodes
the exo-
-D-glucanase (ExGase) responsible for
this hydrolysis. Because the
-glucan accumulates during cell elongation and becomes the major cellulose cross-linking glycan, the
hydrolysis of the
-glucan by the seedling exo- and endoglucanases has been considered to be necessary for wall expansion in the grasses
(Hoson and Nevins, 1989
). The ExGase and
endo-
-D-glucanase activities are located in the seedling
cell walls (Huber and Nevins, 1981
). The endoglucanase hydrolyzes the
-glucan only at cellodextrin-rich regions containing four or more
contiguous (1
4)-
-D-glucosyl linkages (Hatfield and
Nevins, 1987
). These cellodextrin sites are spaced roughly 50 glucosyl
units apart in the
-glucan. Cleavage of the polymer into smaller
fragments facilitates the complete hydrolysis to Glc by the seedling
ExGase. The ExGase hydrolyzes both (1
4)-
and (1
3)-
linkages
from the non-reducing end of
-D-poly- and
oligosaccharides (Huber and Nevins, 1982
).
In this paper, we describe the purification of the maize (Zea
mays) cell wall ExGase and the characterization of its activity against native and artificial substrates. Although a vast majority of
the enzyme is associated with the cell walls of developing maize
seedlings where it autolyzes
-glucans, affinity-purified antibodies
against the cell wall enzyme cross-react with an ExGase associated with
the exterior surface of the plasma membrane. Unlike the wall-associated
enzymes, the plasma-membrane ExGase is severely attenuated in its
ability to hydrolyze non-reducing terminal (1
4)-
linkages,
indicating a polysaccharide other than the (1
4)-linkage-rich
-glucan is the target of this ExGase isoform.
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RESULTS |
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Purification of the ExGase
A summary of the purification steps is shown in Table I. A substantial enrichment of ExGase activity was achieved by purifying cell walls from total cytosolic proteins by filtration of the homogenate and by extensive washing with buffer containing 100 mM NaCl. Most of the ExGase was extracted from the cell walls by 3.5 M LiCl. Polysaccharides were also extracted, and the cationic cell wall proteins were isolated by SP-Sephadex chromatography. More than 63% of the original ExGase activity was recovered from the resin. To separate ExGase from other proteins, HPLC on an S-300 cation-exchange column recovered about 29% of the activity compared with the crude cell wall extract, resulting in a 7-fold increase in specific activity. Concanavalin A (Con A) chromatography to enrich for high-Man-containing glycoproteins increased the specific activity of ExGase 20-fold. After subsequent adsorption chromatography on hydroxyapatite, a single major peak of activity was observed. The peak containing ExGase activity exhibited a single band of about 64 kD in SDS-PAGE (Fig. 1). The single band of native protein, with an apparent pI of 7.2 after isoelectric focusing, was verified to be ExGase by in situ hydrolytic activity with p-nitrophenyl-glucopyranoside (not shown). ExGase increased 38-fold in specific activity with respect to the protein preparation from purified cell walls.
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Total cationic proteins from the cell wall were transferred to nitrocellulose and incubated with polyclonal antisera prepared against the purified ExGase. The polyclonal antisera had no detectable cross-reactivity with other LiCl-soluble cationic cell wall proteins except for the 64-kD polypeptide and a minor band just below it.
Selection of ExGase cDNA Clones
ExGase from maize seedlings was purified sufficiently by S-300 cation-exchange HPLC to be used in N-terminal sequencing after separation from other polypeptides by SDS-PAGE. The enzyme was digested with trypsin, and the resulting peptides were separated by reverse-phase HPLC. Four peptides gave discernible sequence, and the amino acid sequences from the largest of these peptides were used to design oligonucleotide probes to screen cDNA clones selected from an expression library prepared from maize seedling RNA. From a total of six putative cDNA clones selected from the expression library with the polyclonal antisera, two of the cDNAs (1.0 and 1.1 kb) hybridized with a degenerate 17-bp probe constructed to encode a pentapeptide within the largest of the tryptic fragments. These two clones were confirmed, by sequencing of the 3' region, to be from the same transcript. The larger of the two was completely sequenced and found to contain a peptide sequence of a second tryptic fragment.
The nucleotide sequence from the cDNA clone represented roughly
one-half of an expected full-length cDNA required to encode a 64-kD
polypeptide. Reprobing the original cDNA library, as well as a
second library obtained from another laboratory, revealed several
additional clones, all smaller than or equal in size to the original.
Furthermore, no products related to the clone were obtained by reverse
transcription-PCR of freshly isolated poly(A+)
RNA from maize seedlings using several universal primers in tandem with
primers based on the known sequence. We concluded that the secondary
structure of the transcript prevented the synthesis of cDNA from the
N-terminal portion of the transcript. However, we were able to
select genomic clones that provided the full-length sequence, the
5'-untranslated region, and about 1,500 bp of the promoter region
(Fig. 2). The genomic sequence contains
nine exons, with the eight introns varying between 85 and 304 bp in
length. All of the exon/intron junctions follow the GT/AG rule (Goodall and Filipowicz, 1989
). The polyadenylation signal AATAA is situated 220 bp from the TAG stop codon. An untranslated region of 682 bp upstream
from the 5' end of the open reading frame contains a putative TATA box
situated 126 bp upstream from the ATG start codon. A CAAT box and a GC
box, GGGCGG, are located 175 and 471 bp, respectively, upstream from
the ATG start signal. A 22-amino acid putative signal peptide of the
primary translation product has a predicted cleavage site preceding the
first Glu residue to yield a mature protein of 600 amino acids (Fig.
3A). The four tryptic peptides that
were microsequenced are represented in the genomic clone,
including the peptide EYLK, which represents the N terminus of the
mature protein. The mature protein has a monoisotopic molecular mass of
64,613 D.
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The predicted pI of the mature protein is 6.9. The hydropathy plot of the deduced amino acid sequence of the primary translation product shows, in addition to the strong signal peptide, a 20-amino acid hydrophobic motif between amino acids 528 and 549, 80 amino acids upstream from the C terminus (Fig. 3B). Hydrophobic cluster analysis (HCA) reveals a [KR]-x-[EQK]-xxxx-G-xxx-[ST]-D motif characteristic of family 3 glucosidases (Fig. 4).
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Enzyme Properties of the Cell Wall ExGase
The cell wall ExGase specifically hydrolyzed terminal
-D-glucopyranoside, with little activity toward terminal
-D-glucopyranoside, and no activity against eight other
-glycosides (Table II). The enzyme was
active over a broad temperature range, with greater than one-half
maximal activity between 25°C and 50°C. The pH dependence of the
enzyme activity was relatively broad. Greater than one-half maximal
activity of the ExGase was observed in the range pH 3.5 and 6.5, with a
pH optimum of 4.8. The Km and
Vmax for the hydrolysis of
p-nitrophenyl
-D-glucopyranoside by
the purified ExGase were derived from the measurement of reaction
velocity at different concentrations of substrate. The
Km was 0.89 mM, and Vmax
was 13.4 µmol mg
1
min
1 (Table II). At substrate concentrations
below 1 mM, the ExGase hydrolyzed all four
-D-glucosyl disaccharides but at different rates. The Kms of the 2-, 4-, and 6-linked
-D-glucosyl disaccharides were 66, 53, and 68 µM, respectively, whereas that for laminaribiose was 128 µM. In contrast, the Vmax was
highest for laminaribiose at 9.1 µmol mg
1
min
1, with relative
Vmax for cellobiose about one-half that of
laminaribiose; sophorose and gentiobiose had intermediate rates of 7.8 and 6.3 µmol mg
1
min
1, respectively. Laminaridextrins of tri- to
pentasaccharide were hydrolyzed at rates lower than laminaribiose,
whereas the cellodextrins were hydrolyzed at rates slightly higher than
cellobiose.
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At concentrations above 2 mM, the cell wall ExGase
exhibited glucosyl transferase activity and generated tri- and
tetrasaccharides from disaccharides. The primary products of the
transglycosylation were (1
6)-linked and (1
4)-linked mixed-linkage
oligomers (Fig. 5). Transferase activity
with laminaribiose yielded primarily mixed-linkage tri- and
tetraglucosides, and after incubations overnight with laminaribiose,
gentiobiose and cellobiose were the major disaccharides remaining (Fig.
5B).
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Expression of ExGase Genes
Tissue prints of the coleoptile and mesocotyl immunolabeled with
polyclonal antisera against the ExGase showed the enzyme to be
concentrated in the basal regions of the coleoptile and in the growing
region of the mesocotyl (Fig. 6). The
-glucan content of the coleoptile wall increased to its highest
proportion at the maximum rate of elongation and then decreased
markedly as growth culminated (Fig. 7E).
The loss of
-glucan is correlated with a marked increase in activity
of the ExGase extracted from the wall by LiCl. Immunogel-blot analyses
of cell wall ExGase indicated that polypeptides of two distinct sizes
were present during cell elongation of the coleoptile. The smaller of
the two with a molecular mass of 62 kD is constitutive and present
immediately after imbibition, whereas a larger polypeptide with a
molecular mass of 64 kD appears during later stages of elongation,
consistent with the onset of the decrease in
-glucan content (Fig.
7A). Northern gel-blot analyses demonstrated that the ExGase
transcripts were abundant soon after imbibition, decreased slightly
during the maximum rate of elongation, and increased once again at the late stages of growth (Fig. 7B). In contrast, transcripts of profilin5, an actin-associated protein, displayed an abundance that is expected of
a gene whose expression is correlated with growth rate (Fig. 7C).
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Association of an ExGase with the Plasma Membrane and Cell Wall
The predicted hydrophobic motifs in the deduced amino acid
sequences of ExGases indicated that these enzymes may associate with
the plasma membrane as well as the cell wall. ExGase activity was
indeed associated with plasma membranes, which were enriched by
two-phase aqueous partitioning (Fig. 8),
and the enzyme was also detected at the exterior of the plasma
membranes of protoplasts with affinity-purified antibodies against the
purified cell wall ExGase (Fig. 9,
G-L). The membrane-associated ExGase exhibited activity against (1
2)-, (1
3)-, and (1
6)-linked disaccharides in a similar manner as the cell wall ExGase, but activity against (1
4)-linked disaccharides was severely attenuated (Fig. 8).
Two-phase detergent partitioning with Triton-X-114 showed that the
membrane association was extrinsic (Fig.
10). The molecular mass of the membrane-associated ExGase was similar to the smaller, constitutive polypeptide of ExGase found in the cell wall.
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The membrane-associated ExGase retained activity after recovery from the aqueous phase, but showed no increase in relative activity against cellobiose (Fig. 8). Whereas the cell wall enzyme demonstrated substantial transglycosylase activity at substrate concentrations above 2 mM, the membrane-associated activity did not (Fig. 11). The affinity-purified antibodies against the wall ExGase labeled cross walls and longitudinal walls of maize coleoptiles equally (Fig. 9F).
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DISCUSSION |
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The Cell Wall ExGase Has Both Hydrolase and Transferase Activities
The purification of the seedling cell wall ExGase was
simplified greatly by virtue of its tenacious binding to the wall. By isolating cell walls, the enrichment of ExGase was at least 20-fold at
the onset of the column purifications. High-performance cation-exchange chromatography and Con A affinity chromatography enriched the enzyme to
near homogeneity. Although a single major activity associated with
hydrolysis of non-reducing terminal
-D-linked glucosyl
units was observed in our extractions of the total cationic proteins from the walls of developing shoots, there appeared to be a shoulder of
ExGase activity tailing the major peak. The purified enzyme gave a
single band by SDS-PAGE after hydroxyapatite chromatography (Fig. 1).
Polyclonal antisera recognized primarily a single polypeptide in total
protein extracts from the wall but faintly detected a second
polypeptide of slightly smaller molecular mass (not shown). In
contrast, extraction of freshly isolated walls directly with SDS-PAGE
sample buffer revealed two distinct polypeptides of the ExGase (Figs. 7
and 10). Isoelectric focusing revealed a single broad band with an
apparent pI of 7.2. These results are consistent with reports of ExGase
activity in maize coleoptiles associated with a single polypeptide of
about 70 kD in SDS-PAGE and western gel blots (Hoson and Nevins, 1989
).
Northern gel-blot analyses also show a single broad band that may
include several independent and unresolved transcripts, but at the
present time we cannot determine if the two polypeptides of the cell
wall are from different genes or represent post-translational
processing of the same polypeptide. In contrast, Hrmova et al. (1996)
reported that at least four barley
-D-glucosidase
activities were well resolved by cation-exchange chromatography; they
purified two isoforms of ExGase similar to the maize enzyme reported
here and two isoforms of
-D-glucosidase. Whereas we
extracted cell walls only from developing shoots, Hrmova et al. (1996)
purified glucosidases from the entire germinating seedling, including
the endosperm, which was undergoing complete digestion of its cell
walls. Further, the
-D-glucosidases were similar in
activity to those of the germinating seeds of barley as reported by
Leah et al. (1995)
. The maize ExGase reported here is strictly
associated with growing cells of the developing seedling and not the endosperm.
The differences in activity between ExGases and the
-D-glucosidases are substantial. The ExGase has a strict
requirement for non-reducing terminal
-D-glucosyl units
but can cleave the terminal sugar from the four possible
-linkage
positions. The enzyme can preferentially hydrolyze 3-linked units over
4-linked units, but the enzyme will completely digest polymeric
fragments of
-glucan to Glc once the longer runs of cellodextrins
within the macromolecule have been cleaved by a seedling-specific
endo-
-D-glucanase. In contrast, the
-D-glucosidase I hydrolyzes both
-D-glucosyl and mannosyl p-nitrophenyl
glycosides, and preferentially hydrolyzes the terminal unit of 3- and
4-linked oligomers, but is inactive against 6-linked oligomers (Leah et
al., 1995
). The second isoform of the
-D-glucosidase is essentially inactive against
3-linked oligomers and preferentially digests the cellodextrins (Hrmova et al., 1996
).
Transglycosylase activities at high substrate are well documented for
numerous exo- and endohydrolases (Henrissat, 1991
), and, consistent
with the observations of Hrmova and Fincher (1998)
, the ExGase can
convert oligomers of one linkage type to another, i.e. convert
laminaridextrins and sophorose to gentiobiose and cellodextrins, but
not vice versa (Fig. 5, A and B). The propensity to accumulate gentio-
and cellodextrins may simply arise from the fact that they are the
poorest substrates; the transglycosylase activity may be random, but
the cellodextrins may accumulate because the enzyme exhibits the lowest
turnover rates with these substrates.
The Cell Wall ExGase Is a Family 3 Glycosidase
The transcript from the maize ZmEXG1 encodes a
622-amino acid polypeptide. The deduced sequence of the maize ExGase
shares an 86% amino acid identity with a barley seedling ExGase (Fig. 3A), which is reflected in the similarity of their hydropathy indices
(Fig. 3B). Two additional ExGases from Arabidopsis and tobacco with
substantial amino acid identity were found in the database, and another
from cotyledons of nasturtium seedlings has also been characterized
(Crombie et al., 1998
). The maize enzyme contains a 22-amino acid
signal peptide with a predicted cleavage site between an Ala and Glu
residues. This prediction is supported by the presence of a
Glu-Tyr-Leu-Lys peptide from N-terminal sequencing of tryptic peptides
of the mature protein.
The predicted pIs of these related ExGases vary widely, from greater
than 9.5 for the nasturtium enzyme (Crombie et al., 1998
) to 7.9 for
the barley enzyme to 6.9 for the mature maize enzyme. These predictions
are consistent with a pI of 8.0 empirically determined for the barley
ExGase by chromatofocusing and a pI of 7.2 for the maize enzyme by
isoelectric focusing in polyacrylamide gels (not shown).
Despite the deduced homology between the ZmEXG1 and other
plant ExGase cDNAs, the native substrates and relative activities against
-linked substrates are different. The maize and barley ExGase are both able to cleave the non-reducing terminal sugar from the
mixed-linkage
-glucan, and can also cleave the terminal
-D-linked glucosyl unit from each of the four
possible disaccharides and the cellodextrin and laminaridextrin series.
However, cleavage of (1
4)-
-D-glucosyl
terminal units is substantially higher in the nasturtium ExGase than in
the cereal enzymes. As Hrmova et al. (1996)
noted, because the ExGases
displayed highest activity toward the (1
3)-
-linkage, they belong
to the EC 3.2.1.58 group (Cline and Albersheim, 1981
; Labrador and
Nevins, 1989
).
The maize ExGase shares some sequence similarity with some more
primitive extracellular
-D-glucosidases such as an
869-amino acid
-D-glucosidase (EC 3.2.1.74) from
Pseudomonas fluorescens (Rixon et al., 1992
), an 822-amino
acid
-D-glucosidase (EC 3.2.1.21) from
Dictyostelium discoideum (Bush et al., 1994
), and a
-D-glucosidase (EC 3.2.1.4) from an
unidentified bacterium (Healy et al., 1995
). Nevertheless, the motif
[KR]-x-[EQK]-xxxx-G-xxx-[ST]-D in a hydrophobic cluster places
the maize ExGase in the family 3 group of glucosidases (Henrissat,
1991
). This conclusion is strengthened by an HCA (Henrissat et al.,
1995
), which predicts that the Asp-286 of the mature protein is the
nucleophile of the active site (Fig. 4). In contrast, the Arabidopsis
ExGase contains a similar motif but is missing the consensus [EQK]
amino acid in what is otherwise well-conserved sequence among the five
ExGases (Figs. 3A and 4). Three-dimensional structural analysis of
another barley ExGase isoform shows that the expected nucleophilic
Asp-285 and Glu-491 reside in a pocket predicted to be the catalytic
domain (Varghese et al., 1999
). The three-dimensional structure of a
barley ExGase also shows that three of the five potential glycosylation
sites bear carbohydrates.
The Membrane-Associated ExGase Is a Distinct Enzyme
The cereal ExGases display hydrophobic runs between amino acids
528 and 549 (Fig. 3), which are predicted to be weak membrane anchors
(Horton and Nakai, 1996
, 1997
). The Arabidopsis and nasturtium ExGases
also contain the hydrophobic regions that indicate possible membrane
association (Fig. 3). Of the three, nasturtium has the highest
hydrophobicity, peaking at over +2.8. Although the prediction of the
weak membrane anchor in the deduced amino acid sequence of the ExGase
prompted us to look for glucosidase activity in the plasma membrane,
the sequence of the gene we cloned encodes the cell wall enzyme. The
four peptides sequenced from the cell wall ExGase are each identical to
those predicted in the deduced amino acid sequence of the cloned gene
(Fig. 3A). Two additional partial-length cDNAs obtained from seedling
transcripts were also examined, and neither of them match these four
peptide sequences (data not shown). We surmised that the plasma
membrane activity could result from transient association of the cell
wall ExGase, and that the selective attenuation of the
(1
4)-
-D-glucosyl hydrolase activity (Fig. 8) is a
result of its membrane-directed conformation. However, the
membrane-associated activity is aqueous-soluble after two-phase
detergent partitioning (Fig. 10), and the
(1
4)-
-D-glucosyl hydrolase activity is not recovered
after this extraction (Fig. 8). Whereas the cell wall ExGase exhibits
significant transglycosylase activity (Figs. 5 and 11), the
membrane-associated ExGase demonstrates negligible activity (Fig. 11).
Even though they cross-react with the same affinity-purified antibodies
directed against purified cell wall ExGase, we conclude that the
membrane-associated enzyme is a different gene product whose gene we
have yet to identify.
Wall- and Membrane-Associated ExGases Must Have Different Functions during Cell Growth
Early studies on the enzymatic activities of the primary cell wall
associated with elongation in grasses and dicots were made before there
was widespread appreciation for the differences in structure of the
cross-linking molecules and cell wall architecture (Taiz, 1984
). Only
species in the Poales, the order containing the grass family, contain
the
-glucans (Smith and Harris, 1999
). The synthesis of the
-glucans only during cell expansion is a special feature of the
grasses, indicating that the polymer is at least associated with the
mechanism of cell expansion. Growth in vivo is accompanied by a net
accumulation of the
-glucan (Fig. 7) that masks an extremely rapid
turnover (Gibeaut and Carpita, 1991
). The
-glucan is gradually lost
from the wall once growth and synthesis of new
-glucan ceases (Fig.
7). Hence, the synthesis and hydrolysis of the
-glucan are in
dynamic equilibrium. The correlation factor for
-glucan and growth
is not the relative abundance, but rather the rate of turnover, the
balance of synthesis, and degradation (Gibeaut and Carpita, 1991
). A
long-held idea is that the
-glucans that cross-link the cellulose
microfibrils are cleaved by an endo-
-D-glucanase and the
turgor pressure of the cell expands the loosened microfibrils (Huber
and Nevins, 1981
; Taiz, 1984
). The appearance of
endo-
-D-glucanase and ExGase in the cell walls during
cell growth and the ability of antisera directed against these enzymes
to inhibit growth strengthen this hypothesis (Hoson and Nevins,
1989
).
The discovery of XET (Pritchard et al., 1993
; Wu et al., 1994
) and
expansins (Li et al., 1993
) in growing grass tissues has reopened the
question of the necessity of glucan hydrolysis during growth and,
consequently, in the function of the glucan hydrolases. The activity of
neither expansin nor XET involves a net breakage of glycosidic linkages
(Cosgrove, 1997
; Nishitani, 1997
). The endoglucanase- and
ExGase-catalyzed turnover of
-glucan may occur subsequent to the
physical mechanism of wall loosening required for expansion and may be
part of a sugar recycling mechanism that occurs after growth. Our
expression and activity studies support this idea. Transcripts are more
abundant very early and very late during cell elongation (Fig. 7), but
the appearance of the second wall-associated ExGase protein and
extractable activity coincide only with the later expression. Hence,
the appearance of the enzyme in the wall is not strictly correlated
with growth but rather the turnover of the
-glucan that occurs after
growth has ceased. In contrast, transcript levels of profilin5, an
actin-associated protein, demonstrate the abundance expected of a
growth-correlated gene (Fig. 7). The ExGase is also not unique to the
grasses. Very similar enzymes appear in species with Type I walls, such
as tobacco, Arabidopsis, and nasturtium
species that contain no
-glucan but have xyloglucan as the major cross-linking
polysaccharide (Crombie et al., 1998
).
The presence of a hydrophobic motif in the ExGase genes is puzzling.
The more abundant ExGase is associated with the cell wall and not the
plasma membrane. The apparent membrane anchor could partition the
ExGase away from its substrate during synthesis of
-glucan in the
Golgi apparatus and co-packaging into secretory vesicles. Local pH,
ionic environment, or other physiological conditions at the
wall-membrane interface may control membrane binding or release to the
cell wall. Nevertheless, an ExGase is associated tightly with the
plasma membrane (Figs. 9, G-L, and 10) that possesses an alteration
that specifically attenuates activity against cellodextrins (Fig.
8) and essentially lacks transglycosylase activity (Fig. 11). These
data indicate that the membrane-associated ExGase is a different enzyme
with a different function.
We thought of three possible functions of such an enzyme at the cell
wall-plasma membrane interface. First, the enzyme may function
coordinately with the pathogenesis-related endoglucanase as part of the
defense against fungal pathogens (for review, see Boller 1993
).
Oligomers hydrolyzed from fungal (1
3)-
-D- and (1
6)-
-D-glucans would be converted to Glc, and the
lack of (1
4)-
-hydrolase activity would ensure that no plant cell
wall glucan is targeted for hydrolysis. As the fungal oligomers have
been shown to possess elicitor activity, the ExGase would diminish this
activity by removal of the effector. A related phenomenon is the
removal of the 3-linked glucan callose that is made transiently during
cell plate formation (Samuels et al., 1995
) or as callose-plugs that are associated with the blockage of penetration of fungi or in other
membrane wounding. The membrane-associated ExGase with high activity
toward 3-linked glucans could function in this turnover. Third, the
ExGase could be associated with cellulose biosynthesis, which occurs at
the wall-membrane interface. Endoglucanases with membrane anchors also
have been discovered recently in tomato (Brummell et al., 1997
) and
Agrobacterium (Matthysse et al., 1995
). The bacterial enzyme
is required for cellulose synthesis, and a mutation in expression of an
Arabidopsis endoglucanase related to the tomato enzyme results in
severe dwarfism accompanied by a decrease in the normal cellulose
content (Nicol et al., 1998
). Brummell et al. (1997)
indicated that the
membrane-associated endoglucanase functions in cellulose synthesis.
Chapple and Carpita (1998)
suggested that this endoglucanase may
proofread the glucan chains and excise any mistake linkages. The
membrane-associated ExGase may assist in this repair by removing any
non-reducing terminal Glc linkages other than (1
4)-
. Regardless
of function at the membrane, the presence of a unique hydrolase at the
cell wall-membrane interface demands an evaluation of the maize and other plant ExGases for functions in addition to depolymerization of
growth-related
-glucans and xyloglucans.
| |
MATERIALS AND METHODS |
|---|
|
|
|---|
Purification of the Cell Wall ExGase
Maize (Zea mays L.) seeds were soaked overnight in running deionized water, sown in trays of moist vermiculite, and incubated in the dark at 30°C. The shoots of 4-d-old etiolated seedlings, including mesocotyl, coleoptile, and primary leaves, were harvested and used for enzyme isolation. The maize shoots were homogenized in ice-cold extraction buffer (50 mM sodium citrate, 50 mM NaCl, 30 mM ascorbic acid, 1 mM dithiothreitol [DTT], and 0.1 mM phenylmethylsulfonyl fluoride, pH 6.5), filtered through four layers of cheesecloth, and the walls were washed extensively with citrate buffer (50 mM sodium citrate and 50 mM NaCl, pH 5.5), followed by 20 mM NaCl, and then deionized water. Cell walls were purified from cytosolic and membrane contaminants by sequential homogenizations in acetone, 100 mM NaCl, and water, and the walls were collected on nylon cloth after each step. The walls were washed with 20 mM NaCl and deionized H2O until the effluent was completely clear. The cell walls were then suspended, stirred overnight in ice-cold 3.5 M LiCl in 20 mM sodium acetate, pH 5.0, and 20 mM NaCl to release the basic cell wall proteins, and the extract was filtered. The filtrate was concentrated to about 50 mL in dialysis bags, overlaid with polyethylene glycol 8,000, and then dialyzed against 20 mM sodium acetate and 20 mM NaCl, pH 5.0. The filtrate was centrifuged at 10,000g for 10 min to remove precipitated material, and SP-Sephadex cation-exchange resin equilibrated with 20 mM sodium acetate and 20 mM NaCl, pH 5.0, was added to the cleared filtrate. The resin with bound proteins was washed with 20 mM sodium acetate and 20 mM NaCl, pH 5.0, and the cell wall proteins were eluted with 0.7 M NaCl in 20 mM sodium acetate and dialyzed against 20 mM sodium acetate and 20 mM NaCl, pH 5.0.
The cell wall proteins binding to SP-Sephadex (15 mg in 50 mL) were
loaded onto an S-300 cation-exchange column (Synchropak, Lafayette,
IN); the bound proteins were washed with 50 mL of loading buffer and
eluted in a 30-mL linear gradient to 0.6 M NaCl in the 20 mM sodium acetate buffer, pH 5.0. Fractions with ExGase activity were pooled and applied to a Con A-Sepharose column (1 × 4 cm) equilibrated in 50 mM sodium acetate, pH 7.0, 2 mM MnCl2, and 2 mM
CaCl2. The column was washed with the same buffer and the
bound proteins were eluted in a 100-mL linear gradient of methyl
-D-mannopyranoside to 2 mM. The fractions
with ExGase activities were pooled and loaded onto a hydroxyapatite
column equilibrated with 10 mM sodium phosphate, pH 7.0, and washed with the same buffer. The absorbed proteins were eluted in a
two-step linear gradient of sodium phosphate, pH 7.0, from 10 to 50 mM, and then from 50 to 300 mM. After each
chromatographic step, the fractions with ExGase activity were dialyzed
against 20 mM sodium acetate, pH 5.0, and 20 mM
NaCl, and protein was measured with either bicinchoninic acid (Pierce
Chemical, Rockford, IL) or Coomassie protein assay reagents (Pierce),
with BSA as the standard.
One-dimensional isoelectric focusing of proteins was performed in
polyacrylamide slab gels under non-denaturing conditions (Menteur et
al., 1995
). The gel was sliced, one-half was stained with Coomassie
Blue for detection of protein, and the other half was incubated with
0.1% (w/v) p-nitrophenyl glucoside in 20 mM sodium acetate (pH 4.8) and incubated at 35°C for up to 1 h. The reaction product in the gel was detected by the addition of 0.1 M NaOH.
Coleoptile cell walls from seedlings up to 6-d-old in darkness at
30°C were prepared by homogenization of the frozen tissues in
ice-cold 50 mM sodium acetate, pH 5.5, containing 50 mM NaCl and 30 mM sodium ascorbate. The settled
cell walls were washed several times with additional homogenization
buffer, followed by 100 mM NaCl, and water. After each
wash, the walls were allowed to settle at ambient gravity. Samples were
taken for extraction of the ExGase with 3.5 M LiCl,
dialysis, and concentration by SP-Sephadex as described above.
-Glucan in additional portions of the wall sample were digested by
Bacillus subtilis endoglucanase and quantified by
high-pH anion-exchange HPLC (Gibeaut and Carpita, 1993
). The
remainder of the wall preparations was concentrated by centrifugation
and suspended in an equal volume of PAGE sample buffer containing 20%
(w/v) SDS and 100 mM DDT and heated to 65°C for 10 min followed by boiling for 5 min.
Characterization of the Cell Wall ExGase Activity
ExGase activity was measured in column fractions by the
determination of Glc released from a barley
-glucan (Sigma, St.
Louis) and p-nitrophenyl
-D-glucoside
(Sigma). The reaction mixture contained 100 µL of 0.5% (w/v)
-glucan, 10 µL of each protein fraction, and 1 drop of toluene to
prevent microbial contamination. The mixture was incubated at 30°C
for 2 h, and Glc from the
-glucan was measured enzymatically
with hexokinase and Glc-6-P dehydrogenase (Carpita and Kanabus, 1987
).
One unit of ExGase was defined as the capacity to produce 1 nmol Glc
mg
1 min
1.
Several p-nitrophenyl monosaccharides were used as
substrate for the enzyme to identify ExGase specificity (Sun and
Henson, 1990
). The substrate was prepared to 0.1% (w/v) in 20 mM sodium acetate (pH 4.8) and 20 mM NaCl. The
reaction mixtures containing 1 mL of p-nitrophenyl
monosaccharide and 10 µL (0.1 µg) of the enzyme were incubated at
37°C for up to 1 h. Reactions were stopped with 100 µL of 1 M NaOH, and the A420 was
measured. The
-glucan (0.5% [w/v]) was prepared in a pH series
from pH 3 to 10 in 20 mM sodium acetate with 20 mM NaCl or mixtures of 10 mM sodium citrate and
20 mM sodium phosphate (McIlvaine, 1921
). The substrate (100 µL) in each different pH and enzyme (0.1 µg) was incubated at
30°C and D-Glc was measured as described above. To study
temperature dependence, reactions with
-glucan were made with sodium
acetate or sodium citrate-phosphate at the optimal pH 4.8. The mixture of substrate (100 µL) and enzyme (0.1 µg) was incubated at
different temperatures and the D-Glc was assayed as
described above.
p-Nitrophenyl
-D-glucoside (Sigma),
sophorose [
-D-glucosyl-(1
2)-D-Glc]
(Sigma), laminaribiose
[
-D-glucosyl-(1
3)-D-Glc] (Seigakawa
Sugar, Falmouth, MA), cellobiose
[
-D-glucosyl-(1
4)-D-Glc] (Seigakawa
Sugar), and gentiobiose
[
-D-glucosyl-(1
6)-D-Glc] (Sigma) were
used as substrate to examine the kinetics of hydrolysis for
terminal-linked
-D-Glc from different linkage positions. Longer oligomers of the laminari- and cellodextrin series (Seigakawa Sugar) were also used to determine whether degree of polymerization affected the rate of Glc release. The substrates were prepared to
various concentrations in 20 mM sodium acetate, pH 4.8 or
5.0, and 20 mM NaCl. The Km and
Vmax were determined from Lineweaver-Burk plots for ExGase measured at the optimum pH and temperature and time
from apparent first order reaction kinetics.
To determine degree of transglucosylation, the reaction products were
separated by HPLC on a PA-1 anion-exchange column (Dionex, Sunnyvale,
CA). The column was equilibrated in 0.5 M NaOH and a
non-linear programmed gradient to 0.2 M sodium acetate in
0.5 M NaOH, which we designed to optimize separation of
glucosyl oligomers to a degree of polymerization of 6 (Bancal et al.,
1993
). Sugars were detected by pulsed amperometry (Dionex).
Oligosaccharides appearing as a result of transglycosylation were
collected, desalted, and neutralized by passing through proton-exchange
mini-columns (H-columns, Dionex). Residual acetic acid was evaporated
under a stream of nitrogen gas. The residue was methylated with
n-butyllithium and methyl iodide as described by Gibeaut
and Carpita (1993)
. Partly methylated alditol acetates were
separated by gas-liquid chromatography and identified by
electron-impact mass spectrometry as described by Carpita and Shea
(1989)
.
Sequencing of the ExGase Peptides
The ExGase in gel slices after SDS-PAGE was washed twice with
200 mM ammonium carbonate in 50% (v/v) acetonitrile and
semi-dried on Parafilm (Neenah, WI) under glass. The dried slices were
rehydrated with 5 µL of 200 mM ammonium carbonate, pH
8.9, containing 0.02% (w/v) Tween 20; 2 µL of trypsin (200 µg mL
1) in the same buffer was added, and the protein
was digested at 30°C for 4 h (Ferrera et al.,
1993
). The reaction was stopped by addition of 1.5 µL of
trifluoroacetic acid (TFA), and the peptides were extracted with 60%
(v/v) acetonitrile in 0.1% (v/v) TFA. The peptides were separated by
reverse-phase chromatography on a C18 Vydac 218TP52 column (Separations
Group, Hesperia, CA) in a non-linear gradient of 0.1% (v/v) TFA
in water to 0.8% (v/v) TFA in 70% (v/v) acetonitrile in water. Four
major peptides were collected and subjected to automated Edman sequence analysis.
Preparation of Affinity-Purified Antibodies and Immunogel-Blot Detection of ExGase
The Con A affinity-purified ExGase (100 µg) was isolated as a
single band by SDS-PAGE and electroblotted from the gel onto cellulose
nitrate. Polyclonal antibodies were raised in Balb-c strain mice after
subcutaneous insertion of slices of cellulose nitrate containing the
blotted ExGase. The cell wall proteins binding to SP-Sephadex were
separated by SDS-PAGE, and the ExGase was detected by western gel
blotting about 5 to 6 weeks after inoculation. The blot was routinely
incubated with the primary antibody (1:1,000 dilution) overnight at
4°C, and alkaline-phosphatase-conjugated goat anti-mouse antiserum
(Bio-Rad, Hercules, CA) was used as secondary antibody (1:3,000
dilution). Affinity-purified antibodies were prepared by incubation of
the blotted proteins with the polyclonal ExGase antisera, and elution
of the antibodies from slices of the cellulose nitrate containing the
ExGase band was as described by Chan et al. (1996)
. Western gel
blotting with the affinity-purified antibodies was with 1:500 dilution
of the final preparation.
Isolation of ExGase cDNA Clones
A cDNA expression library was constructed from
poly(A+)-enriched RNA from 5-d-old etiolated maize
seedlings. The cDNA was ligated into a
Uni-ZAP XR vector
(Stratagene, La Jolla, CA), and the library was amplified in SURE cells
(Stratagene). After induction of cells with
isopropyl-1-thio-
-D-galactoside, the library was plated
and screened with polyclonal antisera prepared against the purified
ExGase. Six independent clones were selected after two rounds of
immunoscreening, and the cDNA inserts were rescued into plasmid pBSII
SK(
). A low degeneracy oligonucleotide [5'-GA(T/C) GC(T/C)
CA(T/C/G/A) TA(T/C) GA(T/C)-3'] based on the amino acid sequence
DAHYDP from the 17-mer peptide of ExGase was end-labeled with
[
-32P]ATP and used to probe the cDNA inserts from the
putative clones. Two of the six clones were positive, and the larger of
the two was sequenced.
Isolation of Genomic Clones Encoding the ExGase
A genomic library of maize W-23 was obtained from Dr. Surinder
Chopra (Iowa State University, Ames). The library was
constructed in a
FIX II vector using partially filled
XhoI/Sau3A digested DNA. About 5 × 105 clones were screened with a randomly primed cDNA clone
as probe. Putative clones were purified by secondary and tertiary
screening, and DNA was prepared from liquid lysates. The cDNA clone
contained a SacI site 940 bp upstream from the
polyadenylation site, and this site was exploited to digest the genomic
clone into two fragments of 3.5 and 7 kb that both hybridized with the
cDNA probe. These fragments were subcloned into pBluescript II KS and
sequenced in both directions from the SacI cleavage
sites. Protein and nucleotide databank searches were performed with the
BIONET National Computer Resource for Molecular Biology with Wisconsin
Genetics software.
Northern Gel-Blot Analyses
Maize coleoptiles at various stages of elongation were harvested
in liquid nitrogen. Total RNA was prepared with an RNeasy Plant Mini
Kit (Qiagen USA, Valencia, CA) and separated in a 1% (w/v)
agarose-formaldehyde gel. The RNAs from the gels were transferred onto
nylon membranes (Hybond N, Amersham, Buckinghamshire, UK) by capillary
blotting and fixed by UV cross-linking. The ExGase cDNA clone and a
profilin5 cDNA clone, provided by Dr. Chris Staiger (Purdue
University) used as probes were labeled with
[32P]dCTP by random priming (Redivue, Amersham). The RNA
gel-blot hybridization at high stringency was performed according to
Sambrook et al. (1989)
.
Tissue Printing of Coleoptile and Mesocotyl Seedlings
Cellulose nitrate membranes were soaked in 3.5 M LiCl in 20 mM sodium acetate and 20 mM NaCl, pH 5.5, and air-dried. Two- and 3-d-old etiolated maize seedlings comprising coleoptile and mesocotyl were cut longitudinally, and the cut faces of the tissues were pressed against the membranes for 2 h. The membranes were probed with ExGase antisera (1:200 dilution) as described for western gel-blot analyses.
Identification of ExGase at the Plasma Membrane
Three-day-old etiolated maize coleoptiles were isolated and frozen in liquid nitrogen and gently mashed in a chilled mortar and pestle in an equal volume of ice-cold 50 mM HEPES [4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid]-Bis Tris Propane [1,3-bis(Tris[hydroxymethyl]methylamino) propane], 10 mM KCl, 5 mM EDTA, 5 mM EGTA, 10 mM DTT, and 0.2 mM phenylmethylsulfonyl fluoride, pH 7.2. The mashings were squeezed through nylon cloth (Nitex, Tetko, Briarcliff Manor, NY), 47-µm2 pores), and centrifuged at 3,000g for 10 min to pellet fine debris. The supernatant liquid was then centrifuged at 140,000g for 20 min in a SW28 rotor (Beckman Instruments, Fullerton, CA). The membrane pellet was gently suspended in 6.5% (w/v) polyethylene glycol 3,350 and 6.5% (w/v) Dextran 500T in 5 mM potassium-phosphate and 3 mM KCl, pH 7.2 (two-phase buffer). The pellet was then frozen, thawed, and gently sheared by six strokes in a smooth glass tube with a Teflon piston (LabGlass, Vineland, NJ). Additional two-phase buffer was added, and plasma membranes were prepared by two rounds of partitioning (100 inversions followed by centrifugation at 400g for 5 min at 4°C). The membranes were washed twice in 20 mM HEPES [KOH], pH 7.2, containing 10 mM KCl, and pelleted by centrifugation at 100,000g. Marker assays were performed after resuspension in the dilution buffer. Membrane proteins were dissolved by water-bath sonication in a PAGE sample buffer containing 10% (w/v) SDS, 100 mM DTT, and 4 M urea, and separated by SDS-PAGE. The ExGase was detected by western gel blotting.
The membrane-associated ExGase was then subjected to two-phase
detergent partitioning of extrinsic and intrinsic proteins with
Triton-X-114 (Bordier, 1981
). Briefly, the plasma membrane preparation
was brought up to 10% (v/v) prepartitioned Triton-X-114. The membranes
were dissolved by two transitions to 37°C from 4°C, and then
returned to 4°C. Undissolved material was removed by centrifugation,
and the supernatant was then brought to 37°C for 10 min to achieve
phase separation. The supernatant was tested for enzyme activity
against
-linked disaccharides as described above. Extrinsic and
intrinsic membrane proteins were precipitated in 0.1 M
ammonium acetate in methanol at
20°C overnight. The detergent phase
pellet was also dissolved in ethanol and the protein therein
precipitated overnight.
Preparation of Protoplasts
Two-day-old etiolated maize coleoptiles were isolated, sliced
into sections about 1 mm thick, and incubated in Murashige-Skoog salts
(Murashige and Skoog, 1962
), pH 6.0, containing 0.25 M sorbitol (protoplast medium). The sections were
transferred to protoplast medium containing 1% (w/v) cellulase (CELF,
Worthington Biochemical, Lakewood, NJ) and 0.2% (w/v) pectinase (PEL,
Worthington Biochemical), and incubated with gentle shaking at 30°C.
The protoplasts were passed through nylon cloth (Nitex,
47-µm2 pores), washed twice with protoplast isolation
medium, and, after gentle pelleting, mixed with 20% (w/v) Ficoll in
protoplast medium. The Ficoll-protoplast mixture was overlaid with 10%
(w/v) and 0% Ficoll in protoplast medium, and the protoplasts were
purified by flotation centrifugation at 100g to the 10%
(w/v) Ficoll:0% Ficoll interface. The protoplasts were collected by
gentle centrifugation and washed free of Ficoll with additional
protoplast medium.
The ExGase antisera and affinity-purified antibodies (1:10 dilution) were added to suspensions of cell walls and protoplasts, incubated at ambient temperature for 30 min, and then the suspensions were diluted several times with protoplast medium, and detected with fluorescein isothiocyanate (FITC)- or tetramethylrhodamine isothiocyanate (TRITC)-conjugated rabbit anti-mouse antiserum secondary antibodies (1:20 dilution, Bio-Rad). Samples were viewed in a research microscope fitted with a digital camera (SPOT, Leica Microsystems, Wetzlar, Germany), and frames were captured in Adobe Photoshop at 300 dpi (Adobe Systems, Mountain View, CA).
| |
ACKNOWLEDGMENTS |
|---|
We thank John Wilder (Purdue Hybridoma Facility) for the preparation of the polyclonal antisera, Alan Mahrenholz (Purdue Laboratory of Macromolecular Structure) for the peptide sequencing, and undergraduate research assistants Matt McConnell and Joseph Pong for their help with hydrolase and transglycosylase assays. We thank Joe Ogas (Purdue University) for his help with the microscopy, Surinder Chopra (Iowa State University) for the maize genomic library, and Chris Staiger (Purdue University) for the cDNA clone of profilin5. We also thank Larry Dunkle, Mark Hermodsen, Maureen McCann, and Charles Woloshuk for their valuable comments on the manuscript.
| |
FOOTNOTES |
|---|
Received October 1, 1999; accepted February 8, 2000.
1 This work was supported in part by the Division of Energy Biosciences, U.S. Department of Energy (contract no. DE-FG02-88ER13903). This is journal paper no. 16,003 of the Purdue Agricultural Experiment Station.
2 Present address: Agricultural Biotechnology Institute, Rural Development Administration, Suwon, 441-707, Korea.
* Corresponding author; e-mail carpita{at}btny.purdue.edu; fax 765-494-0363.
| |
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