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Plant Physiol, August 2000, Vol. 123, pp. 1247-1256
Brassinosteroid-Insensitive-1 Is a Ubiquitously Expressed
Leucine-Rich Repeat Receptor Serine/Threonine Kinase1
Danielle M.
Friedrichsen,2
Claudio A.P.
Joazeiro,2
Jianming
Li,2 3
Tony
Hunter, and
Joanne
Chory*
Plant Biology Laboratory (D.M.F., J.L., J.C.), Molecular Biology
and Virology Laboratory (C.A.P.J., T.H.), and Howard Hughes Medical
Institute (J.C.), The Salk Institute for Biological Studies, La Jolla,
California 92037; and Department of Biology, University of California
at San Diego, La Jolla, California 92037 (D.M.F.)
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ABSTRACT |
Brassinosteroid (BR) mutants of Arabidopsis have pleiotropic
phenotypes and provide evidence that BRs function throughout the life
of the plant from seedling development to senescence. Screens for BR
signaling mutants identified one locus, BRI1, which encodes a protein with homology to leucine-rich repeat receptor serine
(Ser)/threonine (Thr) kinases. Twenty-seven alleles of this putative BR
receptor have been isolated to date, and we present here the
identification of the molecular lesions of 14 recessive alleles that
represent five new mutations. BR-insensitive-1 (BRI1) is expressed at
high levels in the meristem, root, shoot, and hypocotyl of seedlings
and at lower levels later in development. Confocal microscopy analysis
of full-length BRI1 fused to green fluorescent protein indicates that
BRI1 is localized in the plasma membrane, and an in vitro kinase assay
indicates that BRI1 is a functional Ser/Thr kinase. Among the
bri1 mutants identified are mutants in the kinase
domain, and we demonstrate that one of these mutations severely impairs
BRI1 kinase activity. Therefore, we conclude that BRI1 is a
ubiquitously expressed leucine-rich repeat receptor that plays a role
in BR signaling through Ser/Thr phosphorylation.
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INTRODUCTION |
Receptor protein kinases (RPKs)
activate a complex array of intracellular signaling pathways in
response to the extracellular environment (van der Geer et al., 1994 ;
Padgett, 1999 ). RPKs are single-pass transmembrane proteins that
contain an amino-terminal signal sequence, extracellular domains unique
to each receptor, and a cytoplasmic kinase domain. In general, ligand
binding induces homo- or heterodimerization of RPKs, and the resultant
close proximity of the cytoplasmic domains results in kinase activation
by transphosphorylation. Although plants have many proteins similar to
RPKs, no ligand has been identified for these receptor-like kinases
(RLKs). The majority of plant RLKs belong to the family of Ser/Thr
kinases, and most have extracellular Leu-rich repeats (LRRs; Becraft,
1998 ). The LRRs form a solvent-exposed parallel -sheet, which
creates a surface that mediates protein-protein interactions in other systems (Kobe and Deisenhofer, 1995 ). The known interactors for mammalian LRR receptors are peptide hormones, such as nerve growth factor and gonadotropin (Braun et al., 1991 ; Kobe and Deisenhofer, 1995 ).
Plant LRR-RLKs are involved in multiple processes including regulation
of development (ERECTA, HAESA, and CLV1), disease resistance (Xa21),
and steroid hormone signaling (brassinosteroid [BR]-insensitive-1 [BRI1]) (Song et al., 1995 ; Torii et al., 1996 ; Clark et al., 1997 ;
Li and Chory, 1997 ; Jinn et al., 2000 ). ERECTA is important for proper
shaping of organs originating in the shoot apical meristem (Torii et
al., 1996 ). CLV1 is involved in the control of cell division and
differentiation in the shoot apical meristem with CLV3 being the
putative peptide ligand (Fletcher et al., 1999 ). Missense mutations in
either the LRRs or the kinase domains of CLV1 and ERECTA lead to loss
of function, confirming the importance of these domains for function
(Torii et al., 1996 ; Clark et al., 1997 ). BRI1 encodes a putative BR
receptor (Li and Chory, 1997 ), and bri1 mutants display a
BR-deficient phenotype but fail to be rescued by BR treatment (Clouse
et al., 1996 ; Kauschmann et al., 1996 ; Li and Chory, 1997 ; Noguchi et
al., 1999 ). BRs are a unique class of plant steroids found throughout
the plant kingdom that exhibit multiple effects when applied
exogenously, including cell expansion of young aerial tissues,
especially the hypocotyl and leaf petioles (Mandova, 1988 ). Classical
animal steroid hormone receptors belong to a subfamily of nuclear
receptors that are ligand-dependent transcription factors that regulate
gene expression (Beato et al., 1995 ). There is also evidence for action
of steroid hormones outside the nucleus involving membrane receptors
and protein phosphorylation (Wehling, 1997 ). In Xenopus
oocytes, progesterone through an unidentified surface-associated
receptor activates a Ser/Thr kinase, Eg2 (Andrésson and Ruderman,
1998 ). Additionally, progesterone stimulates Tyr phosphorylation in
human sperm via a putative cell surface receptor (Tesarik et al., 1993 ;
Mendoza et al., 1995 ), and in osteoblastic cells estrogen causes a
rapid and transient MAP kinase activation (Endoh et al., 1997 ).
The BRI1 extracellular domain contains 21 tandem amino-terminal LRRs, a
70-amino acid island domain and four additional LRRs preceding the
transmembrane domain. This organization is similar to that in tomato
disease-resistance membrane-anchored LRR proteins, Cf-2, Cf-4, Cf-5,
and Cf-9 (Jones and Jones, 1997 ; Dixon et al., 1998 ). These proteins
contain "loop out" domains, similar to but smaller than the island
domain, and these "loop out" domains interrupt tandem LRRs,
creating four separate LRRs prior to the transmembrane domain. Three
bri1 mutations are in glycines of the island domain, and one
is a missense mutation in the first LRR following the 70-amino acid
island domain (Li and Chory, 1997 ; Noguchi et al., 1999 ), supporting
the necessity of these regions for function. Four missense mutations
occur in the cytoplasmic Ser/Thr kinase domain of BRI1, implicating
another essential domain for BRI1 function (Li and Chory, 1997 ; Noguchi
et al., 1999 ).
In this paper we present the identity of additional recessive alleles
of BRI1, which highlights the importance of certain domains
for BRI1 function. Additionally, we used a green fluorescent protein
fusion to show the localization of BRI1 to the plasma membrane and to
determine its pattern of expression within the plant. Finally, the
function of BRI1 as a Ser/Thr kinase is directly demonstrated by an in
vitro kinase assay. Therefore, we conclude that BRI1, the putative
brassinolide receptor, is a ubiquitously expressed, plasma
membrane-localized, LRR Ser/Thr kinase.
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RESULTS |
Sequencing of Additional bri1 Alleles Implicates a New
Domain in BRI1-Mediated Steroid Signaling
We previously conducted a screen for BR-insensitive mutants, and
isolated 18 new bri1 alleles (Li and Chory, 1997 ). To
identify regions of functional significance, we sequenced
BRI1 from 14 of these mutants. The molecular lesions of
bri1 alleles are reported in Table
I and are schematically represented in
Figure 1, including already published
bri1 alleles (Li and Chory, 1997 ; Noguchi et al., 1999 ). We
identified three new mutations in the kinase domain; bri1-1
and bri1-108 are missense alleles altering amino acids Ala-909 to Thr and Arg-983 to Gln, respectively. Ala-909 in subdomain II is present in all protein kinases, and Arg-983 in subdomain VIA is
conserved among the putative plant LRR receptor kinases, including
BRI1, CLV1, ERECTA, and Xa21 (Li and Chory, 1997 ). The bri1-117 allele has a mutation at codon 1,139 of a
non-conserved Asp to Asn in a region of the protein that generally
contains negatively charged residues in protein kinases. These new
mutants re-emphasize the necessity of the BRI1 kinase domain. In the
BRI1 extracellular domain, we identified two new mutations: a nonsense mutation in bri1-114 generates a stop codon early within the
70-amino acid island domain, and a missense mutation in
bri1-102 results in the substitution of Thr-750 with an Ile.
The latter mutation occurs after the 25th LRR and before the second Cys
pair, indicating a new region in BRI1 whose integrity is necessary for
function.

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Figure 1.
The majority of bri1 mutations cluster
in the island and kinase domains. A schematic representation of BRI1
including all the known bri1 point mutations with their
predicted effects. Symbols represent the following:
, Signal peptide;
, putative Leu-zipper motif;
, Cys pair;
, LRRs;
, 70-amino acid island;
, transmembrane domain;
, kinase domain.
Asterisk, These alleles were published by Noguchi et al. (1999) .
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BRI1 Is a Ubiquitously Expressed Plasma Membrane-Localized
Protein
To determine the spatial pattern of expression and subcellular
localization of BRI1, a green fluorescent protein (GFP) fusion with the
C terminus of full-length BRI1 was made in the context of a BRI1
genomic clone containing, in addition to coding sequence, 1.7 kb of promoter DNA and upstream regulatory elements. This translational
fusion (BRI1::GFP) was able to rescue
bri1-104 (data not shown), indicating that the fusion
protein was functional. The expression of BRI1::GFP is
ubiquitous in young tissue, especially in the meristem. Figure
2 presents a confocal microscopy analysis of BRI1 expression and shows that the BRI1::GFP fluorescence
is localized to the cell surface in the hypocotyl, root, and cotyledons of young light-grown seedlings. The hypocotyl cells of wild-type (vector alone) seedlings (Fig. 2A) exhibit only the background chlorophyll autofluorescence, whereas in the hypocotyls of
BRI1::GFP transgenic plants, the surface of each cell is
outlined by the intense GFP fluorescence. The cotyledons show a similar
pattern with the BRI1::GFP fluorescence illuminating the
surface of epidermal cells (Fig. 2E). Roots have very low background
fluorescence due to the lack of chloroplasts, and in Figure 2C, the
fluorescence of the image was enhanced to show that a root-tip was in
the field. In stark contrast to this wild-type root is the transgenic
root (Fig. 2D), in which the surface of each cell is apparent. In these young cells in the root tip, the cytoplasm is not pushed up against the
plasma membrane because the vacuoles are small. Therefore, we conclude
that the BRI1-directed GFP fluorescence is at the cell wall/plasma
membrane and not in the cytoplasm of these cells. The BRI1
promoter drives expression of BRI1::GFP in all tissues in
both light- and dark-grown seedlings (data not shown). Expression continues in younger tissue, but BRI1::GFP fluorescence
decreases in non-growing older tissue (data not shown).

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Figure 2.
BRI1-GFP is expressed ubiquitously during early
seedling development and is localized to the plasma membrane. A
BRI1::GFP fusion protein was expressed from the
BRI1 promoter in stably transformed wild-type Arabidopsis.
A, Background chlorophyll fluorescence in a wild-type hypocotyl; B,
BRI1::GFP fluorescence along the cell surface of hypocotyl
cells; C, background fluorescence of a wild-type Arabidopsis root; D,
BRI1::GFP at the cell surface in young root; E,
BRI1::GFP at the cell surface in cotyledon epidermal cells
(wild type has only stomata and guard cell chloroplast
autofluorescence, which is not shown); F, BRI1::GFP localizes
with the cytoplasm if cells are collapsed in 0.8 M mannitol, indicating that BRI1::GFP
is in the plasma membrane. Bar = 20 µm.
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To determine if BRI1 is localized to the cell wall or the plasma
membrane, a plasmolysis experiment was performed. Negative osmotic
pressure results in the evacuation of fluid from inside the cell, and
the plasma membrane is internalized with the cellular organelles,
leaving the cell wall unaltered. When roots from a transgenic seedling
were placed in 0.8 M mannitol, the
BRI1::GFP fluorescence was internalized with the plasma
membrane and the rest of the cell (Fig. 2F). Although many plant
LRR-RLKs have putative signal sequences and transmembrane domains, this
is the first evidence of visual localization of a LRR-RLK to the plasma membrane.
BRI1 Is a Ser/Thr Kinase
The BRI1 cytoplasmic domain is predicted to contain Ser/Thr kinase
activity, and we performed an in vitro kinase assay to determine if
BRI1 is an active kinase. Wild-type and mutant BRI1 cDNA
constructs containing a C-terminal HA tag were expressed in human
embryonic kidney 293T cells by transient transfection. The mutants
tested were bri1-101, a kinase domain mutant altering Gly-1078 to Glu in subdomain IX, and bri1-113, which has a
mutation in the extracellular island domain (Fig. 1). Transfected BRI1 is readily detectable as an approximately 150-kD protein by immunoblot of whole cell lysates using the 12CA5 monoclonal antibody and enhanced
chemiluminescence (data not shown). The kinase activity of BRI1
proteins was determined by an in vitro kinase assay. In this assay,
BRI1 is immunoprecipitated from transiently transfected 293T cells and
is incubated with [ -32P]ATP in a buffer
containing Mg2+ and Mn2+.
32P-Labeled proteins are separated by SDS-PAGE
and detected by autoradiography. Figure 3A shows that although
the wild-type and bri1-113 proteins are competent for
autophosphorylation, the kinase activity of bri1-101 is significantly
reduced. Quantitation revealed that the kinase activity of bri1-101 was
45 times lower than that of the wild type in this assay, whereas
bri1-101 expression was only one-half of the wild-type levels (Fig.
3A). The kinase- associated protein
phosphatase (KAPP) binds in a phosphorylation-dependent manner
to the kinase domains of the LRR-RLKs, HAESA (RLK5) and CLV1 (Stone et
al., 1994 , 1998 ; Williams et al., 1997 ). BRI1 was shown to
phosphorylate KAPP as a substrate in vitro (J. Li, R. Williams, E. Meyerowitz, and J. Chory, unpublished data). The kinase domain
sequence predicts that BRI1 belongs to the Ser/Thr kinase family (Li
and Chory, 1997 ). Phosphoamino acid analysis performed with the in
vitro autophosphorylated receptor showed that phospho-Ser and
phospho-Thr were present, thus confirming this prediction (Fig.
3B).

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Figure 3.
BRI1 is a Ser/Thr kinase. Immunoprecipitated
HA-BRI1, wild type, bri1-101, and bri1-113 were used for an in vitro
kinase assay. A, The top presents an autoradiogram of the kinase assay.
The bottom presents an immunoblot using anti-HA antibody of the same
gel. Lane 1, Untransfected 293T cells; lane 2, wild-type BRI1; lane 3, bri1-101 kinase mutant; lane 4, bri1-113 island domain mutant. B,
Autophosphorylation of BRI1 occurs on Ser/Thr residues. Anti-HA-BRI1
autophosphorylation was subjected to phosphoamino acid analysis. The
positions of the internal phospho-Ser, phospho-Thr, and phospho-Tyr
standards (visualized by ninhydrin staining) are indicated. The origin
(+) and the directions of electrophoresis with the pH are as
indicated.
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DISCUSSION |
BRI1 Is a Functional Ser/Thr Kinase
Five plant LRR receptor Ser/Thr kinases have been shown to be
active protein kinases. The kinase domain of HAESA (RLK5), for example,
was expressed in Escherichia coli as a fusion protein and
then was purified and used in in vitro kinase assays (Horn and Walker,
1994 ). The results from these assays showed that the fusion protein
possessed kinetic parameters typical of protein kinases. We chose to
express BRI1 in an animal cell system because similarities exist
between animal and plant cells with regard to the expression and the
peptide signal-mediated membrane targeting of large receptor proteins.
We reasoned that proper membrane expression of the full-length protein
in a cellular context would allow the study of hormonal regulation of
receptor activation. BRI1 expressed in 293T cells by transient
transfection was used for in vivo labeling experiments (data not shown)
and was also immunoprecipitated and used for an in vitro kinase assay.
The in vitro kinase assay revealed that both the wild-type protein and
the product of an allele that contains a mutation in the extracellular
domain were active protein kinases, at least in vitro, under conditions
of antibody-mediated dimerization. On the other hand, the product of
the bri1-101 allele, which contains a mutation in the kinase
domain, exhibited greatly reduced kinase activity. This assay confirms
the predicted activity of the kinase domain of BRI1 and can now be used
as a biochemical tool to identify direct substrates of the activated receptor.
The demonstration that BRI1 encodes an active protein kinase provides
more substantial ground to explain the effects of the intracellular
domain mutations in BRI1. Although mutations in the intracellular
domain of a transmembrane receptor might affect several processes, such
as receptor homo- and heterodimerization, interaction with other
proteins, receptor stability, and enzymatic activity, most mutations
found in the intracellular domain of BRI1 are consistent with the
latter possibility: bri1-1 substitutes an Ala residue in the
protein kinase subdomain II (Hanks et al., 1988 ) that is conserved in
all protein kinases; bri1-8 and bri1-108 substitute an Arg in subdomain VIa that is conserved in LRR kinases; bri1-104 substitutes an Ala in subdomain VII that is
frequently found at that position in other protein kinases;
bri1-115 changes a Gly residue in subdomain VIII that is
thought to be involved in substrate recognition and Ser/Thr
specificity; bri1-107 creates a stop codon that truncates
the kinase domain in subdomain VIII; bri1-117 replaces an
Asp with Asn in a segment of subdomain XI in which negatively charged
residues are frequently observed among protein kinases; and
bri1-101, which revealed greatly reduced kinase activity in
vitro, substitutes a Glu that is frequently found at that position in
subdomain IX of protein kinases.
Phosphoamino acid analyses of in vitro phosphorylated BRI1 revealed the
presence of phosphorylated Ser and Thr only, as originally predicted
from the inspection of primary amino acid sequence of this kinase.
Based on data from other protein kinases, we anticipate that some of
the phosphorylated residues will lie in the activation loop of the
kinase domain, which is in fact Ser/Thr-rich in BRI1. In addition to
activation loop phosphorylation, which generally serves to increase
kinase activity, sites elsewhere may be phosphorylated to recruit
phosphopeptide-binding proteins into an activated receptor complex, as
happens for receptor protein-Tyr kinases. Three modular protein domains
are now known that selectively bind to peptide sequences containing
phosphorylated Ser or Thr: FHA, WW, and 14-3-3 (Yaffe and Cantley,
1999 ). All of these domains are found in plants and, in fact, an FHA
domain-containing protein phosphatase, KAPP, has been shown to
selectively bind to activated LRR receptors (Stone et al., 1994 ;
Williams et al., 1997 ; Braun et al., 1997 ; Li et al., 1999 ).
We have not detected either basal or steroid-induced phosphorylation of
BRI1 in 293T cells labeled with
[32P]orthophosphate, despite the fact that many
variables have been explored and that phosphorylation of several other
protein kinases and kinase substrates was readily detected under
similar conditions (data not shown). Based on what has been learned
from RPKs in other systems and on the observation that at least part of
the autophosphorylation of HAESA (RLK5) is intermolecular (Horn and Walker, 1994 ), we speculate that BRI1 is found in the inactive monomeric state when expressed in 293T cells and that the formation of
kinase-active BRI1 dimers is induced during the immunoprecipitation reaction that precedes the in vitro kinase assay. This model explains why, under the conditions of the latter assay, a ligand is not required
to promote stimulation of receptor kinase activity. Brassinolide and
other steroids may have failed to promote BRI1 dimerization and
activation in intact cells for several reasons, such as a missing
accessory steroid carrier protein or presenting molecule in the
heterologous 293T cell system.
Role of the Extracellular Domain
There are several putative domains in the extracellular region of
BRI1. Analysis of mutant alleles indicates domains of functional importance, including the amino-terminal Cys pair, the 70-amino acid
island, the LRR domain, and the region between the LRR and the second
Cys pair (Fig. 1).
The island domain contains three missense mutations, bri1-6,
bri1-7, and bri1-113, which affect three separate
Gly residues. Although the bri1-113 mutant fails to respond
to the steroid, it was shown in this paper to be an active kinase in
vitro. This mutant could be an active kinase in vitro due to
antibody-mediated dimerization, but in vivo a mutation of Gly in the
island domain Gly might inhibit positive regulation of the kinase
domain. The requirement for this Gly could be due to the small size of
this residue, which allows for a conformational change of the protein when the ligand is bound to activate the kinase domain. Alternatively, mutation of these glycines could interfere with protein/ligand binding
to BRI1 or with extracellular dimerization. Although the importance of
the Gly residues is unclear, the Cf-2, Cf-4, Cf-5, and Cf-9 defense
genes contain "loop out" domains that are similar to the island
domain of BRI1 but that are much smaller, 32, 27, and 39 amino acids,
respectively. All of these proteins contain a Gly for the 6 amino
acid relative to the most carboxy-terminal amino acid in each domain.
This Gly is mutated in the bri1-6 allele, thereby supporting
the hypothesis that the Glys represent a structural requirement for LRR
transmembrane protein function.
The LRR domain is another region possibly involved in protein/ligand
interactions. The predicted site for this interaction is in the solvent
exposed parallel -sheet (Kobe and Deisenhofer, 1995 ). The LxxLxLxx
(x is any amino acid) domain within the LRR corresponds with the
solvent face of the protein with the Leu resides facing away from the
solvent face (Jones and Jones, 1997 ). The x or variable amino
acids could lead to specificity of the protein binding to the LRR. The
strong clv1 alleles, clv1-4 and clv1-8, are both missense mutations in this solvent face
domain. In contrast to this, bri1-9 is a weak allele
(Noguchi et al., 1999 ) altering a Ser in the conserved BRI1 solvent
face, LxxLxLSx (Li and Chory, 1997 ). This mutation could alter
protein/ligand interactions or dimerization. It is interesting that
this mutation is in the first of the four LRR after the island domain.
This could indicate that many of the important molecular interactions occur close to the transmembrane domain. This idea is supported by
bri1-102, a mutation also in this region. Conversely, the
clustering of mutations closer to the transmembrane domain could
indicate that the protein interactions with the first 21 LRRs are
strong enough that altering one amino acid does not significantly
destabilize binding.
BRI1 Expression Is Not Spatially Regulated
BRI1 is expressed in all tissues in the seedling (root, hypocotyl,
cotyledons, and leaves; Fig. 2 and data not shown) and in adult organs,
including cauline leaves and inflorescent stems (data not shown). The
expression pattern of BRI1-GFP fusion protein is consistent with
previous mRNA expression data (Li and Chory, 1997 ), which revealed the
presence of BRI1 transcripts in all tissues. Although there
is no tissue-specific expression of BRI1, there is temporal regulation.
Fully expanded leaves and elongated root or inflorescence cells express
BRI1::GFP at low levels (data not shown). This expression of
the transgene correlates with physiological data that showed that
exogenously applied BRs promote growth only in younger tissues
(Mandova, 1988 ). The lack of response of older tissues to BRs may be
because BRI1, the putative BR receptor, is present at significantly
diminished levels in fully expanded tissues.
Model of BRI1 Signaling
We propose two models for the function of BRI1 in brassinolide
signaling. First, similar to animal RPKs, the binding of ligand to the
LRR or the island domain may result in the dimerization of BRI1 with
itself or another receptor kinase. This dimerization would result in
transphosphorylation and activation of the kinase domain. The activated
kinase would then send a phosphorylation signal to alter gene
expression and induce cell expansion, among other effects. Conversely,
BRI1 may not be the receptor itself but may be a protein in the
brassinolide receptor complex whose extracellular domain is involved in
interactions with other receptor complex proteins. The formation of an
active complex results in activation of the kinase phosphorylation signal.
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MATERIALS AND METHODS |
Plant Material and Growth Conditions
Arabidopsis Columbia was the wild-type ecotype. Seeds were
surface sterilized by washing for 20 min in 70% (v/v) ethanol
containing 0.05% (v/v) Triton X-100, followed by a wash with 95%
(v/v) ethanol. Seeds were dried on filter papers under sterile
conditions and sown on 0.5× Murashige-Skoog medium (Gibco-BRL,
Cleveland) supplemented with 1% (v/v) Suc and 0.8%
(v/v) phytoagar. The plates were wrapped in aluminum foil and
left at 4°C overnight to induce germination. Seedlings were grown in
growth chambers at 21°C under long-day conditions (16 h of light).
Sequence Analysis of bri1 Alleles
The alleles described were isolated from ethyl
methane-sulfonate-mutagenized Arabidopsis Columbia seeds
carrying the homozygous mutation glabrous1 (Lehle Seeds,
Round Rock, TX), except for bri1-119, which was obtained
from the Arabidopsis Biological Resource Center (Ohio State University,
Columbus; stock no. CS399, ecotype Enkheim-2). Genomic DNA was isolated
from various bri1 mutants using a plant DNA miniprep
method (Li and Chory, 1997 ). Based on the wild-type BRI1 sequence, three pairs of gene-specific primers
(forward 1, 5'-AGTTACCATTGCAGACGA-3'; reverse 1, 5'-AACCCAACCAACGACGTT-3'; forward 2, 5'-GAATTCAATCTCCGGTGCTA-3';
reverse 2, 5'-GAAGAGGATAACCACAGA-3'; forward 3, 5'-TGGTTCGATTCCTGATGA-3'; and reverse 3, 5'-GAAT-TAATAGGTCACGTGC-3') were designed to amplify three
overlapping PCR fragments covering approximately 2.0 kb of
5'-untranscribed/untranslated sequence, the complete protein-coding
sequence (3, 588 bp), and 420 bp of 3'-untranslated region. PCR
amplifications were conducted in 100-µL reaction volumes containing
50 mM Tris [Tris-(hydroxymethyl)-aminomethane]-HCl (pH 8.3), 2 mM MgCl2, 0.01% (w/v)
gelatin, approximately 100 ng of Arabidopsis DNA, 200 µM
dNTPs, 250 ng each of a specific pair of BRI1 primers,
and 5 units of Taq DNA polymerase (Fisher Scientific, Pittsburgh).
The PCR reactions were performed in a thermocycler (Trio-Thermoblock,
Biometra, Germany) by denaturing the template DNA for 5 min at 95°C
followed by 40 cycles of 45 s at 94°C, 45 s at 55°C, 90 s at 72°C, and a 10-min extension at 72°C. The PCR products were size-fractionated by electrophoresis in 0.8% (w/v) agarose gel, purified using the QIAEX II gel extraction kit (Qiagen,
Chatsworth, CA), and directly sequenced on an ABI PRISM 310 genetic
analyzer using the dRhodamine terminator cycle sequencing kit
(PE-Applied Biosystems, Foster City, CA). Putative mutations were
identified by comparing the DNA sequences of mutant bri1
alleles with the wild-type BRI1 sequence using the
Lasergene Sequence Analysis System (DNASTAR, Inc., Madison, WI), and
they were confirmed by sequencing at least two independently amplified
PCR fragments or by conducting cleaved-amplified polymorphic
sequence/derived cleaved-amplified polymorphic sequence analysis
(Konieczny and Ausubel, 1993 ; Neff et al., 1998 ). The wild-type
BRI1 gene of the ecotype Enkheim-2 was sequenced and
used to identify the bri1-119 mutation.
Construction of BRI1::GFP
The entire BRI1 coding region, including 1,690 bp
of promoter relative to the translation start, was fused to GFP5.1 by
replacing the BRI1 stop codon with a three-amino acid linker: Trp, Asp, Pro. GFP5.1 was created by inserting the
NdeI-BstBI fragment from mGFP5 (GenBank accession no. U87974; Siemering et al.,
1996 ) into a S65T mutated version of GFP. This fusion construct was cloned into pCHF4, a pPZP212-derived vector with a pea ribulose 1,5-bisphosphate carboxylase terminator
SacI-EcoRI fragment. An ASE
Agrobacterium tumefaciens strain containing the
BRI1::GFP translational fusion construct was
used to transform wild-type Arabidopsis plants by vacuum infiltration.
Transformed seedlings were selected on 0.5× Murashige-Skoog
medium, 1% (w/v) Suc, 0.8% (w/v) phytagar, and
50 µg/mL kanamycin and were propagated on soil.
Fluorescence Microscopy
Confocal and conventional fluorescence microscopy were performed
on an IX70 inverted microscope (Olympus, Tokyo). Fluorescence was
filtered with fluorescein isothiocyanate filter sets (Olympus).
In Vitro Kinase Assay
Hemagglutinin (HA) tag was added to the 3' end of
BRI1, bri1-101, and
bri1-113 by cloning the PCR product (BRI1-N,
5'-CCCCGGGTACCTTGAGAAATGAAGACT-3'; BRI1-HAC,
5'-GGGCTAGCGTAATCTGGAACATCGTATG-GGTATAATTTTCCTTCAGGAACTTC-3') from
wild-type BRI1 DNA and bri1-101 and
bri1-113 mutant DNA into the pCMX-PL2 vector. The
products were sequenced to confirm that no mutations were introduced by
the PCR. Human embryonic kidney 293T cells were maintained in
Dulbecco's modified Eagle's medium supplemented with 10%
(v/v) fetal calf serum. Five micrograms of HA-tagged
BRI1 plasmid DNA and 5 µg of carrier DNA were
transfected into 2 × 106 cells with the calcium
phosphate method (Sambrook et al., 1989 ). Forty-eight hours after
transfection, cells were lysed in buffer containing 25 mM
Tris-Cl (pH 8.0), 1% (v/v) Nonidet-P40, 10 mM phenylmethylsulfonyl fluoride, 1 mM dithiothreitol, 10 units/mL aprotinin, 20 µg/mL leupeptin, 20 mM EDTA, 10 mM -glycerophosphate, 1 mM sodium
orthovanadate, and 10 mM sodium fluoride for 20 min on ice.
Cell lysates were cleared by centrifugation after a 20-min incubation
with fixed Staphylococcus aureus at 4°C. HA-tagged BRI1 proteins were immunoprecipitated with the 12CA5 anti-HA tag monoclonal antibody and protein A agarose beads (RepliGen,
Needham, MA). The immune complexes were washed twice with lysis buffer, once with phosphate-buffered saline, and twice with kinase reaction buffer (20 mM HEPES
[4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid], pH 7.4, 10 mM MgCl2, 10 mM MnCl2,
and 1 mM dithiothreitol). After a 20-min incubation
at room temperature in 20 µL of kinase reaction buffer containing 5 µM ATP and 5 µCi [ -32P]ATP (1 Ci = 37 GBq), the kinase reaction was terminated by the addition of 1 mL
of phosphate-buffered saline containing 20 mM EDTA.
Immune complexes were collected by centrifugation, resuspended in
sample buffer, separated on denaturing SDS/polyacrylamide gel, transferred to Immobilon-P membrane (Millipore, Bedford, MA), reacted with primary and secondary antibodies (12CA5 and horseradish per-oxidase-conjugated sheep anti-mouse, respectively), and
visualized by enhanced chemiluminescence (Amersham, Buckinghamshire,
UK). Kinase reaction products were detected in the same
membrane by autoradiography.
Phosphoamino Acid Analysis
The experiment was performed as described by Boyle et al.
(1991) .
 |
ACKNOWLEDGMENTS |
The authors would like to thank Jeff Plautz and Steve Kay for
assistance with the confocal microscope.
 |
FOOTNOTES |
Received March 16, 2000; accepted April 4, 2000.
1
This work was supported by grants from the U.S.
Department of Agriculture (to J.C.) and the National Institutes of
Health (to T.H.). J.C. is an associate investigator of the Howard
Hughes Medical Institute. T.H. is a Frank and Else Schilling American Cancer Society research professor. D.M.F. was partially supported by a
National Institutes of Health Training Grant. C.A.P.J. and J.L. were
American Cancer Society Postdoctoral Fellows.
2
These authors contributed equally to the paper.
3
Present address: Department of Biology, University of
Michigan, Ann Arbor, MI 48109.
*
Corresponding author; e-mail chory{at}salk.edu; fax 858-558-6379.
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16(24):
3113 - 3129.
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T. Montoya, T. Nomura, K. Farrar, T. Kaneta, T. Yokota, and G. J. Bishop
Cloning the Tomato Curl3 Gene Highlights the Putative Dual Role of the Leucine-Rich Repeat Receptor Kinase tBRI1/SR160 in Plant Steroid Hormone and Peptide Hormone Signaling
PLANT CELL,
December 1, 2002;
14(12):
3163 - 3176.
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D. M. Friedrichsen, J. Nemhauser, T. Muramitsu, J. N. Maloof, J. Alonso, J. R. Ecker, M. Furuya, and J. Chory
Three Redundant Brassinosteroid Early Response Genes Encode Putative bHLH Transcription Factors Required for Normal Growth
Genetics,
November 1, 2002;
162(3):
1445 - 1456.
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S. Choe, R. J. Schmitz, S. Fujioka, S. Takatsuto, M.-O. Lee, S. Yoshida, K. A. Feldmann, and F. E. Tax
Arabidopsis Brassinosteroid-Insensitive dwarf12 Mutants Are Semidominant and Defective in a Glycogen Synthase Kinase 3beta -Like Kinase
Plant Physiology,
November 1, 2002;
130(3):
1506 - 1515.
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M. Mori, T. Nomura, H. Ooka, M. Ishizaka, T. Yokota, K. Sugimoto, K. Okabe, H. Kajiwara, K. Satoh, K. Yamamoto, et al.
Isolation and Characterization of a Rice Dwarf Mutant with a Defect in Brassinosteroid Biosynthesis
Plant Physiology,
November 1, 2002;
130(3):
1152 - 1161.
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J. Zhao, P. Peng, R. J. Schmitz, A. D. Decker, F. E. Tax, and J. Li
Two Putative BIN2 Substrates Are Nuclear Components of Brassinosteroid Signaling
Plant Physiology,
November 1, 2002;
130(3):
1221 - 1229.
[Abstract]
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H. Goda, Y. Shimada, T. Asami, S. Fujioka, and S. Yoshida
Microarray Analysis of Brassinosteroid-Regulated Genes in Arabidopsis
Plant Physiology,
November 1, 2002;
130(3):
1319 - 1334.
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D.-Z. Zhao, G.-F. Wang, B. Speal, and H. Ma
The EXCESS MICROSPOROCYTES1 gene encodes a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in the Arabidopsis anther
Genes & Dev.,
August 1, 2002;
16(15):
2021 - 2031.
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J.-X. He, J. M. Gendron, Y. Yang, J. Li, and Z.-Y. Wang
The GSK3-like kinase BIN2 phosphorylates and destabilizes BZR1, a positive regulator of the brassinosteroid signaling pathway in Arabidopsis
PNAS,
July 23, 2002;
99(15):
10185 - 10190.
[Abstract]
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Y. Yin, H. Cheong, D. Friedrichsen, Y. Zhao, J. Hu, S. Mora-Garcia, and J. Chory
A crucial role for the putative Arabidopsis topoisomerase VI in plant growth and development
PNAS,
July 23, 2002;
99(15):
10191 - 10196.
[Abstract]
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M. Suzuki, A. Kato, N. Nagata, and Y. Komeda
A Xylanase, AtXyn1, is Predominantly Expressed in Vascular Bundles, and Four Putative Xylanase Genes were Identified in the Arabidopsis thaliana Genome
Plant Cell Physiol.,
July 15, 2002;
43(7):
759 - 767.
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J. M. Scheer and C. A. Ryan Jr.
From the Cover: The systemin receptor SR160 from Lycopersicon peruvianum is a member of the LRR receptor kinase family
PNAS,
July 9, 2002;
99(14):
9585 - 9590.
[Abstract]
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G. J. Bishop and C. Koncz
Brassinosteroids and Plant Steroid Hormone Signaling
PLANT CELL,
May 1, 2002;
14(90001):
S97 - 110.
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J. Li and K. H. Nam
Regulation of Brassinosteroid Signaling by a GSK3/SHAGGY-Like Kinase
Science,
February 15, 2002;
295(5558):
1299 - 1301.
[Abstract]
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S.-H. Shiu and A. B. Bleecker
Plant Receptor-Like Kinase Gene Family: Diversity, Function, and Signaling
Sci. Signal.,
December 18, 2001;
2001(113):
re22 - re22.
[Abstract]
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F. Taguchi-Shiobara, Z. Yuan, S. Hake, and D. Jackson
The fasciated ear2 gene encodes a leucine-rich repeat receptor-like protein that regulates shoot meristem proliferation in maize
Genes & Dev.,
October 15, 2001;
15(20):
2755 - 2766.
[Abstract]
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T. Bouquin, C. Meier, R. Foster, M. E. Nielsen, and J. Mundy
Control of Specific Gene Expression by Gibberellin and Brassinosteroid
Plant Physiology,
October 1, 2001;
127(2):
450 - 458.
[Abstract]
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J. Li, K. H. Nam, D. Vafeados, and J. Chory
BIN2, a New Brassinosteroid-Insensitive Locus in Arabidopsis
Plant Physiology,
September 1, 2001;
127(1):
14 - 22.
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J. Li, K. A. Lease, F. E. Tax, and J. C. Walker
BRS1, a serine carboxypeptidase, regulates BRI1 signaling in Arabidopsis thaliana
PNAS,
April 18, 2001;
(2001)
91065998.
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G. J. Bishop and T. Yokota
Plants Steroid Hormones, Brassinosteroids: Current Highlights of Molecular Aspects on their Synthesis/Metabolism, Transport, Perception and Response
Plant Cell Physiol.,
February 1, 2001;
42(2):
114 - 120.
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R. Yamamoto, S. Fujioka, T. Demura, S. Takatsuto, S. Yoshida, and H. Fukuda
Brassinosteroid Levels Increase Drastically Prior to Morphogenesis of Tracheary Elements
Plant Physiology,
February 1, 2001;
125(2):
556 - 563.
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C. M. Steber and P. McCourt
A Role for Brassinosteroids in Germination in Arabidopsis
Plant Physiology,
February 1, 2001;
125(2):
763 - 769.
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J. Li, K. A. Lease, F. E. Tax, and J. C. Walker
BRS1, a serine carboxypeptidase, regulates BRI1 signaling in Arabidopsis thaliana
PNAS,
May 8, 2001;
98(10):
5916 - 5921.
[Abstract]
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