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Plant Physiol, September 2000, Vol. 124, pp. 475-483
Subcellular Localization of a High Affinity Binding Site for
D-myo-Inositol 1,4,5-Trisphosphate from
Chenopodium rubrum1
Jan
Martinec,*
Tomá
Feltl,
Chris H.
Scanlon,
Peter J.
Lumsden, and
Ivana
Machá ková
Institute of Experimental Botany, Academy of Sciences of the Czech
Republic, Rozvojová 135, 165 02 Prague 6, Czech Republic (J.M.,
T.F., I.M.); and Department of Biological Sciences, University of
Central Lancashire, Preston, PR1 2HE, United Kingdom (C.H.S.,
P.J.L.)
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ABSTRACT |
It is now generally accepted that a phosphoinositide cycle is
involved in the transduction of a variety of signals in plant cells. In
animal cells, the binding of D-myo-inositol
1,4,5-trisphosphate (InsP3) to a receptor located on the
endoplasmic reticulum (ER) triggers an efflux of calcium release from
the ER. Sites that bind InsP3 with high affinity and
specificity have also been described in plant cells, but their precise
intracellular locations have not been conclusively identified. In
contrast to animal cells, it has been suggested that in plants the
vacuole is the major intracellular store of calcium involved in signal
induced calcium release. The aim of this work was to determine the
intracellular localization of InsP3-binding sites obtained
from 3-week-old Chenopodium rubrum leaves. Microsomal
membranes were fractionated by sucrose density gradient centrifugation
in the presence and absence of Mg2+ and alternatively by
free-flow electrophoresis. An ER-enriched fraction was also prepared.
The following enzymes were employed as specific membrane markers:
antimycin A-insensitive NADH-cytochrome c reductase for ER, cytochrome
c oxidase for mitochondrial membrane, pyrophosphatase for tonoplast,
and 1,3- -D-glucansynthase for plasma membrane. In all
membrane separations, InsP3-binding sites were concentrated
in the fractions that were enriched with ER membranes. These data
clearly demonstrate that the previously characterized
InsP3-binding site from C. rubrum is
localized on the ER. This finding supports previous suggestions of an
alternative non-vacuolar InsP3-sensitive calcium store in
plant cells.
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INTRODUCTION |
In common with all other
living organisms, plants must receive and respond to environmental
signals. The phosphoinositide cycle is one of the many signaling
systems known to operate in plant cells. In conjunction with signal
receptors, the phosphoinositide cycle can transduce, amplify, and
integrate environmental signals and thereby trigger a cellular
response. Elevation of intracellular concentrations of
D-myo-inositol 1,4,5-trisphosphate
(InsP3) has been reported in response to fungal
elicitors (Walton et al., 1993 ), light (Cote and Crain, 1994 ), and
abscisic acid (MacRobbie, 1992 ). InsP3 has also
been reported to play a role in the propagation of calcium waves in
pollen tubes (Franklin-Tong et al., 1996 ). Physiological responses such
as stomatal closure (Blatt et al., 1990 , Gilroy et al., 1990 ),
protoplast swelling (Shacklock et al., 1992 ), and growth inhibition of
pollen tubes (Franklin-Tong et al., 1996 ) are all induced by injection
of InsP3 into plant cells. This accumulated
evidence has given rise to the now generally accepted view that the
phosphoinositide cycle is functionally active in plant cells.
Nevertheless, our understanding of the operation of this signaling
pathway in plant cells is not yet complete. For example, the
intracellular localization of InsP3 receptors
(binding sites; InsP3-R) and, hence, the site(s)
of InsP3-sensitive calcium stores has still to be
conclusively demonstrated.
InsP3-R from animals form a family of
multisubunit, transmembrane proteins that function as
InsP3-gated calcium channels. The receptors are
located predominantly on the endoplasmic reticulum (ER), which serves
as a calcium store (Lytton and Nigam, 1992 ). In plant cells, previous
studies have characterized specific high affinity
InsP3-binding sites, possible
InsP3 receptors, and demonstrated features common
to the animal InsP3-R (Brosnan and Sanders, 1993 ; Biswas et al., 1995 ; Scanlon et al., 1996 ). The majority of patch clamp
experiments (Alexandre et al., 1990 ; Johannes et al., 1991 ; Alexandre
and Lassalles, 1992 ) and calcium release studies (Canut et
al., 1993 ; Lommel and Felle, 1996 ) performed using plant cells point to
the vacuole as the main intracellular calcium store. However, Muir and
Sanders (1997) have recently demonstrated
InsP3-sensitive calcium release across
non-vacuolar membranes.
Clear localization of possible InsP3 target(s)
would contribute to a better understanding of the complicated mosaic of
plant cellular signaling. In this paper we describe the subcellular localization of a previously characterized (Scanlon et al., 1996 ) InsP3 high affinity binding site from
Chenopodium rubrum.
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RESULTS |
Distribution of InsP3-Binding and Marker Enzyme
Activities in Suc Density Gradients in the Absence of
Mg2+
Microsomal membranes prepared from C. rubrum leaves
were separated on an 18% to 38% (w/w) Suc gradient. Membrane vesicles were recovered from each fraction. The resulting distributions of total
protein (Fig. 1A), marker enzymes (Fig.
1, B and C), and
[3H]InsP3-binding sites
(Fig. 1D) were determined as described in "Materials and Methods."
Glucan synthase II and cytochrome c oxidase, the markers for plasma
membrane and mitochondria, respectively, were concentrated in the
higher density fractions, 8 to 11. Pyrophosphatase, the tonoplast
marker, was found at slightly lower density with a distinct peak in
fraction 7. Antimycin A-insensitive cytochrome c reductase, the ER
marker, was found in the lower density fractions, 1 to 3, and was well
resolved from the other markers. The distribution of
[3H]InsP3-binding sites
was very similar to that of cytochrome c reductase with a clear peak in
fraction 1 that tailed off over fractions 2 to 5. Chloroplast membranes
were situated in fractions 8 to 9 (identified by green coloration). The
data depicted in Figure 1 are typical results from an experiment
repeated on three further occasions with independent preparations of
M.

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Figure 1.
Microsomal fractions from C. rubrum
were separated on an 18% to 38% (w/w) linear Suc density gradient in
the absence of Mg2+ (3 mM
EDTA). Marker enzyme activities and
[3H]InsP3 binding were
estimated in each fraction as described in "Materials and Methods."
MF, Microsomal fraction. Fraction 1 represents the top of
the gradient. Data are from a typical experiment. Similar results were
obtained from three other independent experiments. A, ,
Protein profile of separated membranes. B, ,
1,3- -D-glucan synthase II (plasma membrane
marker); , pyrophosphatase (tonoplast marker). C, , Cytochrome c
oxidase (mitochondria marker); , antimycin A-insensitive cytochrome
c reductase (ER marker). D, ,
[3H]InsP3 binding.
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Distribution of InsP3-Binding and Marker Enzyme
Activities in Suc Density Gradients in the Presence of
Mg2+
A similar Suc density gradient separation was carried out but with
the incorporation of MgCl2 at a final
concentration of 4 mM. Under these conditions a membrane
pellet was routinely observed (fraction P in Fig.
2), whereas the amount of proteins in
fraction 1 (smooth ER) was so low (Fig. 2A) that we were not able to
measure either the activities of marker enzymes nor
[3H]InsP3 binding (Fig.
2D). The distributions of total protein (Fig. 2A) and the markers for
plasma membrane (Fig. 2A), tonoplast (Fig. 2B), and mitochondria (Fig.
2C) were similar to that observed in the absence of
Mg2+. However, the presence of
Mg2+ resulted in a marked difference in the
distributions of antimycin A-insensitive cytochrome c reductase and
[3H]InsP3-binding sites.
Three peaks of cytochrome c reductase activity were observed, in
fractions 1, 7, and 10. The maximum activity was found in fraction 7. Significant ER marker activity was also measured in the pellet. The
profile of
[3H]InsP3-binding sites
was similar to that of the cytochrome c reductase except that no peak
in fraction 10 was observed. The experiment was performed five times
with independent MF preparations and yielded similar results.

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Figure 2.
Microsomal fractions from C. rubrum
were separated on an 18% to 38% (w/w) linear Suc density gradient in
the presence of 4 mM MgCl2.
Marker enzyme activities and
[3H]InsP3 binding were
estimated in each fraction as described in "Materials and Methods."
Fraction 1 represents the top of the gradient. Data are from a typical
experiment. Similar results were obtained from three other independent
experiments. A, , Protein profile of separated membranes. B,
, 1,3- -D-glucan synthase II (plasma
membrane marker); , pyrophosphatase (tonoplast marker). C, ,
Cytochrome c oxidase (mitochondria marker); , antimycin
A-insensitive cytochrome c reductase (ER marker). D, ,
[3H]InsP3 binding.
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Distribution of Marker Enzyme Activities and InsP3
Binding following Free-Flow Electrophoresis
Free-flow electrophoresis is a powerful method for the separation
of intracellular membranes (Zeiller et al., 1975 ; Morré et al.,
1987 ). In particular it is possible to obtain very good resolution of
tonoplast and plasma membrane fractions, with the center of the
separation field usually containing a mixture of other intracellular
membranes. The separation of microsomal membranes from C. rubrum conformed to this expectation (Fig.
3). The maximum activities of
pyrophosphatase (Fig. 3B) and glucan synthase II (Fig. 3B) were
observed in fractions 1 and 9, respectively. Cytochrome c oxidase and
antimycin A-insensitive cytochrome c reductase activities (Fig. 3C)
were distributed across fractions 2 to 7 with a distinct peak in
fraction 3. [3H]InsP3-binding sites
had a distribution profile closely resembling that of cytochrome c
reductase (Fig. 3D). Data shown in Figure 3 are from one of three
independent experiments, each of which gave similar results.

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Figure 3.
A, Microsomal fractions from C. rubrum
were separated using free-flow electrophoresis in an electric field.
A280 was recorded. Individual fractions
were pooled into nine final fractions (marked regions 1-9). B, C, and
D, Marker enzyme activities and
[3H]InsP3 binding were
estimated in each fraction as described in "Materials and Methods."
Data are from a typical experiment. Similar results were obtained from
two other independent experiments. B, ,
1,3- -D-glucan synthase II (plasma membrane
marker); , pyrophosphatase (tonoplast marker). C, , Cytochrome c
oxidase (mitochondria marker); , antimycin A-insensitive cytochrome
c reductase (ER marker). D, ,
[3H]InsP3 binding.
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Preparation of ER-Enriched Fraction
The association and dissociation of ribosomes from ER in the
respective presence and absence of Mg2+ leads to
a shift in the buoyant density of ER membranes (Ray, 1977 ; Jones,
1980a , 1980b ). This property was utilized to design a stepwise Suc
density gradient separation protocol that yielded a membrane
preparation enriched in ER membranes. The enrichment in ER membranes,
as compared with the MF membrane fraction, was assessed by measuring a
range of marker enzyme activities. Compared with marker enzymes from
plasma membrane, tonoplast, and mitochondria, this preparation was
enriched in ER membranes by a factor of five (Fig.
4).
[3H]InsP3 binding was
also enriched in this preparation and the enrichment factor varied
between 15 and 30 times in separate experiments.

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Figure 4.
A membrane fraction enriched in ER was prepared as
described in "Materials and Methods." Marker enzyme activities and
[3H]InsP3 binding were
estimated in the enriched fraction. Activities and binding are
expressed as percentages of that measured in the MF, which was set to
100%. , Pyrophosphatase; , 1,3- -glucan synthase II; ,
antimycin A-insensitive cytochrome c reductase; , cytochrome c
oxidase; , [3H]InsP3
binding. Data are from a representative experiment (see text for
details).
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DISCUSSION |
The data obtained in the present study demonstrate that the
previously characterized high affinity
[3H]InsP3-binding site
found in C. rubrum leaf membrane preparations (Scanlon et
al., 1996 ) cofractionates with a marker enzyme of ER. Furthermore, this
cofractionation was independent of the physical technique that was used
to affect the separation of membranes. We therefore suggest that this
InsP3-binding site is located on the ER.
To determine the subcellular origin of the membrane vesicles that
possessed InsP3-binding activity, the crude
microsomal membrane preparation was separated using Suc density
gradient centrifugation and by free-flow electrophoresis. A series of
stepped Suc density gradients were also used to obtain an ER-enriched
membrane preparation.
In the presence of Mg2+, a significant percentage
of ER membranes are associated with ribosomes and consequently have a
higher buoyant density. If the Mg2+ is removed
(e.g. by complexing with EDTA) the ribosomes will dissociate from the
ER and the buoyant density of the membrane vesicles will be reduced
(Ray, 1977 ; Jones, 1980a , 1980b ). This phenomenon results in the
density of ER membrane vesicles being Mg2+-dependent and can be used to assist in the
identification of ER-derived membrane vesicles.
In Suc density gradient centrifugations carried out in the absence of
Mg2+ there was a strong correlation between
[3H]InsP3 binding and the
ER marker enzyme, antimycin A-insensitive cytochrome c reductase. When
similar separations were performed in the presence of
Mg2+, both cytochrome c reductase activity and
[3H]InsP3 binding were
shifted to higher Suc densities. Unfortunately, in the presence of
Mg2+ ions, only a very small amount of proteins
remained in fraction 1, which corresponds to smooth ER, so that we were
not able to perform the measurements of either marker enzyme activities
or [3H]InsP3 binding and
calculate which part of the activities was shifted. In spite of this,
comparison of Figures 1 and 2 clearly shows a significant shift of both
the ER marker and
[3H]InsP3-binding
activities to fraction 7 (rough ER). The distribution profile of other
marker enzymes was independent of Mg2+
concentration. The observed increase in the specific activity of
cytochrome c reductase at very high Suc concentrations (fraction 10)
that did not correlate with
[3H]InsP3 binding may be
due to an antimycin A-insensitive cytochrome c reductase activity
associated with vesicles derived from the outer mitochondrial membrane
(Moller and Lin, 1986 ).
The distribution of cellular membranes in the Suc density gradient in
the presence or absence of Mg2+ ions correlates
with results previously published (Robinson et al., 1994 ). Because of
the relatively high content of glycerol (1.1 M) in the
suspension buffer, the actual density of the Suc gradients is higher
than would be the case if only Suc (without glycerol) were present in
the suspension buffer. Smooth ER (fractions 1-4 in the absence of
Mg2+) had a density 1.09 to 1.12 g
cm 3, whereas rough ER (fractions 5-9 in the
presence of Mg2+) had a density 1.13 to 1.16 g cm 3. These densities are in good agreement
with data published by Robinson et al. (1994) . The density of our
tonoplast fraction, which ranged from 1.13 to 1.16 g
cm 3 (fractions 5-9) is higher than generally
reported. Nevertheless, a very broad range for a tonoplast
marker was reported by Morré et al. (1987) , with high activity of
the tonoplast marker a-mannosidase between 24% and 35%
(w/w) Suc. Furthermore, Robinson et al. (1994) reported
densities of 1.07 to 1.09 g cm 3 for
tonoplast from mesophyll and root storage tissue and of 1.17 to
1.19 g cm 3 for tonoplast from seed storage
tissue and maize root and coleoptile.
The separation of membrane vesicles achieved by free-flow
electrophoresis was as predicted by theory. The positively charged plasma membrane vesicles migrated toward the cathode and the
negatively charged tonoplast vesicles migrated toward the anode. Other
intracellular membrane vesicles remained largely unresolved in the
middle of the separation field (Morré et al., 1987 ). The maximum
activity of both cytochrome c reductase and
[3H]InsP3 binding was
found in fraction 3. These activities were both clearly resolved from
the plasma membrane and tonoplast markers. Antimycin
A-insensitive cytochrome c reductase activity and
[3H]InsP3 binding also
displayed a broader distribution than cytochrome c oxidase. This may be
due to some degree of separation between smooth and rough ER vesicles.
An ER-enriched fraction prepared according to Jones (1980b) gave the
clearest relationship between an ER marker and markers of other
membranes. However, the highest antimycin A-insensitive cytochrome c
reductase activity was actually found in the fraction collected after
the first centrifugation (data not shown; see "Material and
Methods"). This can happen due to a high content of mitochondrial
membranes in that fraction. Mitochondrial membrane vesicles also
contained portion of antimycin A-insensitive cytochrome c reductase
activity derived from outer mitochondria membrane (Moller and Lin,
1986 ). Mitochondrial membrane vesicles contain antimycin A-insensitive
cytochrome c reductase activity derived from outer mitochondrial
membranes (Moller and Lin, 1986 ), and there is likely to have been a
high concentration of mitochondrial membranes in that first fraction.
This could explain why the relative activity of antimycin A-insensitive
cytochrome c reductase activity in the enriched fraction was only twice
that of the MF, whereas InsP3 binding was about
30 times greater. The presented results indicate a strong correlation
between the ER enzyme marker, cytochrome c reductase, and the putative
InsP3-R. This supports the conclusion that an
InsP3-R may be located on the ER in plant cells.
Such a conclusion fits with the well established picture of
phosphoinositide signaling in animal cells where the
InsP3-R is thought to be almost exclusively
located on the ER. The properties and localization of
InsP3 -R in plant cells are, by comparison,
poorly understood. There have been a few reports of putative
InsP3-R from plant cells (Brosnan and Sanders,
1993 ; Biswas et al., 1995 ; Dasgupta et al., 1997 ), but these studies
did not specifically address the subcellular localization of the
InsP3-binding site. However, membrane fractions enriched for tonoplast exhibited higher specific
InsP3 binding than microsomal fractions. Cramer
et al. (1998) recently demonstrated cross-reactivity between antibodies
raised against a mammalian InsP3-R and proteins
from isolated vacuoles. In contrast to vacuoles, purified plasma
membrane did not reveal any cross-reactivity.
Another approach to the location of InsP3-R is to
study the release of Ca2+ from different vesicles
in response to a challenge with InsP3. There is
an increasing body of evidence that suggests that the vacuole is a
source of mobile Ca2+ ions sensitive to
InsP3 in plant cells. This evidence includes several investigations where authors studied calcium release from intact vacuoles (Lommel and Felle, 1996 ) or from tonoplast vesicles (Schumaker and Sze, 1987 ). A further series of investigations (Alexandre et al., 1990 ; Johannes et al., 1991 ; Alexandre and Lassalles, 1992 ; Allen and Sanders, 1994 ) used patch clamp techniques to study calcium channels sensitive to InsP3. The
biochemical characteristics of these channels were similar to channels
previously described in animal tissues. However, the patch clamp
technique is limited to work with isolated vacuoles or protoplasts and
there are, therefore, no results available concerning ER. Canut et al. (1993) reported that membrane fractions derived from free-flow electrophoresis responded to InsP3 by releasing
Ca2+. These fractions were characterized as being
enriched in vacuolar membrane based upon the activities of marker
enzymes. Nevertheless there were not present any
Ca2+ ions in their experimental buffer and under
these conditions the InsP3-binding protein
requiring Ca2+ for binding would not bind
InsP3, and Ca2+ release
would not occur. Muir and Sanders (1997) adopted a similar approach in
combination with the use of an antibody against peptides corresponding
to the type 1 mammalian InsP3-R. They found two distinct membrane fractions that were sensitive to
InsP3 and cross-reacted with the antibody raised
against peptides corresponding to the type 1 mammalian
InsP3 receptor. One of these fractions was
clearly derived from vacuolar membranes, whereas the second may have
originated from plasma membrane or ER. These authors suggested that
there may be more than one intracellular store of
Ca2+ in plant cells. This conclusion is
consistent with the fact that young meristematic cells lack central
vacuoles, which in older cells may be the major calcium store.
Although InsP3-sensitive calcium channels have to
date only been detected on the tonoplast, there is indirect evidence
that the ER might also serve as an intracellular calcium store, and certainly an alternative source of mobile calcium within the same cell
might broaden the available spectrum of calcium responses. Within plant
cells there are three membranes with steep electrochemical gradients
for Ca2+ plasma membrane, tonoplast, and ER
(Bush, 1995 ). For example, Ca2+ concentrations
within isolated ER vesicles from aleurone cells have been measured to
be at least 3 µM (Bush et al., 1989 ). Plant ER also
contains low affinity calcium-binding proteins that can serve as a
Ca2+ storage mechanism. There is also rapid
calcium exchange from and into ER vesicles (Bush, 1995 ), whereas
Franklin-Tong et al. (1996) showed that Ca2+
waves in pollen tubes that were triggered by photolysis of caged InsP3 were initiated primarily in the
nuclear-rough ER cellular locale. There is therefore some evidence that
calcium release may occur from the ER in response to
InsP3, and we are therefore planning to
investigate whether this occurs from the ER-enriched fractions shown
here to contain a putative InsP3-R.
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MATERIALS AND METHODS |
Chemicals
[3H]InsP3 (specific activity
0.77-1.15 TBq mmol 1;TRK999),
uridindiphospho-D-[U-14C]Glc
([14C]UDPG; specific activity 11.1 GBq
mmol 1; CFB102) were purchased from Amersham Pharmacia
Biotech (Uppsala), InsP3 (I 9766) was obtained from Sigma
(St. Louis), and Suc for density gradient ultracentrifugation was
obtained from Merck (Germany). All other chemicals were of analytical grade.
Plant Material
Chenopodium rubrum L. (ecotype 374) seeds were
sown on moist compost and germinated under a 36-h regime consisting of
12 h of light at 30°C, 12 h of darkness at 8°C, and
12 h of light at 30°C. After 3 d at 20°C under constant
fluorescent white light (100 µmol m 2 s 1)
seedlings were transferred to new pots and maintained under the same
conditions until harvest. Leaves were harvested after 3 weeks of growth.
Preparation of a Microsomal Fraction
Membrane preparations were carried out at 4°C either in the
presence or absence of Mg2+. For preparations in the
absence of Mg2+, leaves were ground in homogenization
buffer (0.25 M Suc, 3 mM EDTA, 0.2% (w/v)
bovie serum albumin, 5 mM dithiothreitol, 10 mM
ascorbic acid, and 70 mM Tris
[Tris(hydroxymethyl)-aminomethane] adjusted to pH 8.0 with MES
[2-(N-morpholino)-ethanesulfonic acid]) using a
homogenizer (X620, Zipperer, Germany) for 5 min at 20,000 rpm. The
ratio of homogenization buffer to tissue was 2 mL
g 1 fresh weight. The homogenate was filtered through
nylon tissue to remove cell debris and the filtrate centrifuged at
6,000g (Rav) for 10 min (JS-13.1 rotor, Beckman,
Fullerton, CA). The supernatant was decanted and centrifuged at
150,000g (Rav) for 45 min (70 Ti rotor, Beckman). The
resulting pellet (MF) was resuspended in suspension buffer (1.1 M glycerol, 5 mM dithiothreitol, and 10 mM Tris adjusted to pH 8.0 with MES) using a soft brush,
giving a protein concentration of about 20 mg mL 1.
Protease inhibitors were present in homogenization and suspension buffer at the following concentrations: 0.23 mM phenyl
methyl sulfonyl chloride, 0.83 mM benzamidine, 0.7 µM pepstatin A, 1.1 nM leupeptin, and 77 nM aprotinin.
For preparations in the presence of Mg2+, the concentration
of EDTA in the homogenization buffer was 1 mM.
Homogenization and suspension buffers contained MgCl2 at
final a concentration of 4 mM.
Suc Density Gradient Centrifugation
Further fractionation of the MF was achieved by Suc density
gradient centrifugation. Routinely, the MF was layered onto a linear
continuous Suc gradient (18%-38% [w/w] Suc in suspension buffer)
and centrifuged at 30,000g (Rav) overnight (Ti70 rotor, Beckman). The gradient was prepared using an automated gradient sampler
(Auto Densi-flow II C, Haakebuchler, Saddlebrook, NJ). After
centrifugation, membrane vesicles were removed using the gradient
maker, diluted in a ratio of 1:5 with suspension buffer and centrifuged
at 220,000g (Rav) for 45 min (Ti rotor, Beckman 70). Pellets were
resuspended in a minimal volume of suspension buffer and kept (maximum
4 d) at 0°C to 4°C for immediate use or stored at
70°C.
Free-Flow Electrophoresis
Free flow electrophoresis was performed according to Crespi
(1991) using an Elphor VAP 22 (Bender and Hobein, Munich). The chamber
buffer consisted of 15 mM triethanolamine, 4 mM
potassium acetate, 10 mM Glc, 30 mM Suc, and
240 mM Gly-acetic acid (pH 7.5); the electrode buffer
contained 45 mM ethanolamine, 12 mM potassium
acetate, and 720 mM Gly-acetic acid (pH 7.5). The
conditions for separation were as follows: constant current 120 mA
(voltage about 1,200V), chamber buffer flow 4.5 mL
fraction 1 h 1, injection flow 3 mL
h 1, constant temperature 4°C. The distribution of
separated membranes was monitored by UV
A280. Separated membranes were collected
into 100 original fractions. These were then pooled into nine fractions (Fig. 3A), centrifuged, and the resulting pellets resuspended in
suspension buffer.
Preparation of ER
Preparation of purified ER was based on the
Mg2+-dependent shift in density that occurs when ribosomes
dissociate from rough ER. ER was prepared according to Lis and Weiler
(1994) with slight modifications. The homogenization buffer contained 6 mM MgCl2. All solutions containing 6 mM MgCl2 are referred to as "high
Mg2+"; solutions without MgCl2 or containing
6 mM EDTA are referred to as "low Mg2+." MF
prepared using homogenization buffer containing 6 mM
MgCl2 and no EDTA was resuspended in high Mg2+
suspension buffer and was layered onto a high Mg2+ step
gradient consisting of 20%, 30%, and 40% (w/w) Suc in suspension buffer. The gradient was centrifuged for 3 h at
223,000g (Rav; 70 Ti rotor, Beckman). Material from the
30% to 40% interface and the 40% layer was collected, diluted 4 to 5 times in high Mg2+ suspension buffer and centrifuged at
223,000g for 45 min. The resulting pellet was
resuspended in low Mg2+ suspension buffer and layered onto
a low Mg2+ step Suc gradient (gradient as above). After
centrifugation, material from the 20% layer was loaded on 20% (w/w)
Suc. After further centrifugation, smooth ER remained in solution,
whereas all other contaminants were pelleted. Supernatant was diluted in low Mg2+ suspension buffer and centrifuged. The
resulting pellet was resuspended in low Mg2+ suspension
buffer and is referred as the "ER enriched fraction."
Assay of InsP3-Binding Sites
Binding of InsP3 to membrane vesicles was quantified
using a radioligand-binding assay based on the principles outlined by Hulme and Birdsall (1992) . A working stock of
[3H]InsP3 was prepared by drying 100 µL (37 kBq) of the supplied source under N2 to remove ethanol, and
resuspending in 4 mL of water (exact radioactive concentration was
verified by scintillation counting). Routine assays (final volume
of 100 µL) contained 0.9 to 1.8 nM
[3H]InsP3 in accordance with the specific
activity of different batches (20 µL of stock
[3H]InsP3 [11,000-12,000 dpm]), 20 mM bis-tris propane (adjusted to pH 9.0 with MES), 10 mM CaCl2, and 20 µL of a suitable dilution of
the membrane fraction (20 µg of protein). Assays were initiated by
addition of membranes. After 20 min of incubation, 20 µL of water was
added to the sample and 20 µL of InsP3 (final
concentration of 40 µM) was added to blank (determination
of non-specific binding). After a further 20-min incubation, bound and
free [3H]InsP3 were separated by rapid
filtration through 0.4-µm pore diameter nitrocellulose membranes
(Pragopor 6, Pragochema, Czech Republic), which were immediately washed
with 2 mL of ice-cold assay buffer. Non-specific binding was quantified
by parallel experiments that included 40 µM unlabeled
InsP3, and it generally represented 20% to 30% of the
total binding, but in different membrane preparations varied from less
than 10% to more than 50%. Filter discs were transferred to plastic
mini-vials, dissolved in 4 mL of scintillant (Filter count, Packard,
Meriden, CT) and radioactivity determined by scintillation
spectroscopy (LS 5801, Beckman).
Enzyme Marker Assays
Antimycin A-Insensitive NAD(P)H-Dependent Cytochrome c Reductase
(ER Marker)
NAD(P)H-dependent cytochrome c reductase activity was determined
spectrophotometrically at 550 nm in the presence of Tris-MES buffer (pH
7.5), 1.6 mM KCN, 0.15 µM antimycin A, 0.5 mM NADH, 56 µM cytochrome c, and 30 to 50 µg/mL protein (Briskin et al., 1987 ). The reaction was initiated by
the addition of cytochrome c and followed for 5 min (cytochrome c
E = 18.5 mM 1 cm 1) at
25°C.
Cytochrome c Oxidase (Mitochondria Marker)
Cytochrome c oxidase activity was measured according to Briskin
et al. (1987) . One milliliter of assay medium contained 30 mM Tris-MES buffer (pH 7.5), 2 mM digitonin,
and 54 µM cytochrome c. The reaction was initiated by the
addition of 100 µL of membrane fraction (containing 30-50 µg of
protein) and monitored by measuring A550 for
5 min at 25°C. The reduced form of cytochrome c was prepared by
adding a few crystals of sodium dithionite to the cytochrome c solution.
1,3- -Glucan Synthase II (Plasma Membrane Marker)
The activity of 1,3- - glucan synthase II was quantified using
the procedure described by Widell and Larsson (1990) with minor modifications. The assay medium (50 µL) contained 50 mM
Tris-MES buffer (pH 8.0), 0.1% (v/v) Triton X-100, 20 mM
cellobioze, 16% (v/v) glycerol, 0.33 µM digitonin, 100 µM CaCl2, and 0.8 mM UDP-Glc. The
radioactive concentration of [14C]UDP-Glc included in the
assay was 830 Bq. Membrane protein concentration was 0.5 to 0.9 mg/mL.
The assay was initiated by the addition of substrate. Following
incubation for 30 to 50 min at 25°C, the reaction was terminated by
immersion of the test tubes in boiling water for 5 min. The reaction
medium was transferred onto filter discs (3mm, Whatman, Clifton, NJ)
and dried. Filter discs were washed three times for 45 min in 0.5 M ammonium acetate in 30% (v/v) ethanol. Washed discs were
dried and their radioactivity was measured by liquid scintillation counting.
Pyrophosphatase (Tonoplast Marker)
The activity of pyrophosphate was determined as described by
Blumwald and Poole (1987) . The reaction medium contained 30 mM Tris-MES buffer (pH 7.8), 50 mM KCl, 0.5 mM MgSO4, 5 µM gramicidin D, and
0.3 mM sodium pyrophosphate. Membrane preparations were added to a final protein concentration of 25 to 50 µg/mL in 1 mL of
total assay volume. The reaction was initiated by the addition of
substrate. Following a 20-min incubation at 37°C, the reaction was
terminated by the addition of 300 µL of freshly prepared Ames reagent. Released inorganic phosphate was determined according to Ames
(1966) .
Protein Determination
Protein was estimated according to Bradford (1976) using bovine
serum albumin as a standard.
 |
ACKNOWLEDGMENTS |
We thank Olga tajnrtová for expert
technical assistance and Prof. Edgar Wagner of the University of
Freiburg for allowing us to use free-flow electrophoresis in his laboratory.
 |
FOOTNOTES |
Received March 14, 2000; accepted June 5, 2000.
1
This work was supported by the Grant Agency of
the Czech Republic (grant nos. GA204/96/0599 and GA206/96/K188 to J.M.
and I.M.).
*
Corresponding author; e-mail martinec{at}ueb.cas.cz; fax
420-2-20390419.
 |
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