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Plant Physiol, June 2001, Vol. 126, pp. 742-749
Signaling Events in the Hypoxic Induction of Alcohol
Dehydrogenase Gene in Arabidopsis1
Hsiao-Ping
Peng,
Chui-Sien
Chan,
Ming-Che
Shih,* and
Shang Fa
Yang
Department of Biological Sciences, 204 Chemistry Building,
University of Iowa, Iowa City, Iowa 52242 (H.-P.P., C.-S.C.,
M.-C.S.); Department of Vegetable Crops, University of California,
Davis, California 95616 (S.F.Y.); and Institute of Botany, Academia
Sinica, Taipei, Taiwan (S.F.Y.)
 |
ABSTRACT |
Expression of the alcohol dehydrogenase gene (ADH)
of Arabidopsis is induced during hypoxia. Because many plants increase their ethylene production in response to hypoxic stress, we examined in
this report whether ethylene is involved in the hypoxic induction of
ADH in Arabidopsis. We found that the hypoxic induction
of ADH can be partially inhibited by aminooxy acetic
acid, an inhibitor of ethylene biosynthesis. This partial inhibition
can be reversed by the addition of 1-aminocyclopropane-1-carboxylic
acid, a direct precursor of ethylene. In addition, the hypoxic
induction of the ADH gene is also reduced in
etr1-1 and ein2-1, two ethylene
insensitive mutants in ethylene-signaling pathways, whereas the
addition of exogenous ethylene or an increase in cellular ethylene
alone does not induce ADH under normoxic conditions.
Kinetic analyses of ADH mRNA accumulation indicated that
an ethylene signal is required for the induction of ADH
during later stages of hypoxia. Therefore, we conclude that ethylene is
needed, but not sufficient for, the induction of ADH in
Arabidopsis during hypoxia.
 |
INTRODUCTION |
To survive prolonged periods of
oxygen deficiency, all aerobic organisms have had to evolve mechanisms
for sensing oxygen availability and to adjust their cellular metabolism
accordingly. Upon transfer from aerobic to hypoxic/anoxic conditions,
animal and plant cells switch from aerobic respiration to lactic
fermentation (Roberts et al., 1984a , 1984b ). Continued lactic
fermentation throughout hypoxia leads to the acidification of cytoplasm
and rapid cell death in animal tissues. In contrast, after a transient period of lactic fermentation, maize root tip cells will further switch
to alcoholic fermentation and allow glycolysis to continue for a longer
period (Roberts et al., 1984a , 1984b ). Comparative studies of
cytoplasmic acidosis indicate that cytoplasmic pH regulation is an
important factor in survival under hypoxia (Roberts et al., 1984a ,
1984b ; Xia and Saglio, 1992 ).
Anaerobic treatment of maize seedlings causes repression of
pre-existing protein synthesis and induces the synthesis of about 20 anaerobic proteins (ANP) after approximately 90 min (Sachs et al.,
1980 ). Most of the ANPs are enzymes involved in glycolysis and
fermentation (for review, see Sachs et al., 1996 ). It was shown
recently that most hypoxia-induced proteins in maize root tip cells are
also enzymes involved in glycolysis and primary carbohydrate metabolism
(Chang et al., 2000 ). Transcriptional, post-transcriptional, and
translational controls have been shown to regulate synthesis of
ANPs under low-oxygen stress (Fennoy and Bailey-Serres, 1995 ;
Bailey-Serres and Dawe, 1996 ; Drew, 1997 ). Several cis-acting elements
and trans-regulatory factors involved in anoxic and hypoxic inductions
of the alcohol dehydrogenase (ADH) genes in maize and
Arabidopsis have been identified (Ferl and Laughner, 1989 ; Yang et al.,
1993 ; Dolferus et al., 1994 ; Kyozuka et al., 1994 ; Hoeren et al.,
1998 ).
Lysogenic aerenchyma formation, which is characterized by continuous
gas spaces in roots and shoots, occurs in the root cortex of several
plant species during hypoxia (Campbell and Drew, 1983 ; Justin and
Armstrong, 1987 ; Drew et al., 2000 ) and may correlate with tolerance to
flooding (Justin and Armstrong, 1987 ). Lysogenic aerenchyma formation
results from the lysis of cells in the cortical tissues of
hypoxic-treated plants (He et al., 1994 ) and is associated with an
increased cellulase activity, as well as the induction of a gene
encoding a homolog of xyloglucan endo-transglycosylase, a putative cell
wall loosening enzyme (He et al., 1994 ; Saab and Sachs, 1996 ).
An ethylene signal is required for aerenchyma formation in hypoxic
maize roots (for review see, Drew et al., 2000 ; He et al., 1994 , 1996 ).
In contrast, no aerenchyma formation could be observed in maize roots
under anoxic conditions in which ethylene biosynthesis is inhibited
because the conversion of 1-aminocyclopropane-1-carboxylic acid (ACC)
to ethylene by ACC oxidase requires the presence of oxygen (Yang and
Hoffman, 1984 ; Kende, 1993 ). A series of studies using various signal
transduction antagonists showed that an increase in intracellular
Ca2+ is involved in the transduction of an
ethylene signal, leading to the formation of aerenchyma in roots of
maize under hypoxia (He et al., 1996 ). Ca2+ may
also be involved in the signaling pathway leading to the activation of
ADH and glycolytic genes. There is a transient increase in
cytosolic Ca2+ concentration in the early stage
of the flooding of maize roots (Subbaiah et al., 1994a , 1994b ).
Inhibition of this transient cytosolic Ca2+
increase blocked the induction of the ADH1 gene. A
similar anoxic/hypoxic-inducible Ca2+ increase
was observed in Arabidopsis (Sedbrook et al., 1996 ) and
Ca2+ signaling is required for the activation of
the Arabidopsis ADH gene (Chung and Ferl, 1999 ).
Although ethylene was shown to be involved in aerenchyma formation, its
functional role in the hypoxic induction of ADH remains to
be determined. In this report we examined the effect of aminooxy acetic
acid (AOA), an inhibitor of ethylene biosynthesis, on the hypoxic
induction of ADH in Arabidopsis. In addition, we also examined the hypoxic induction of ADH in mutants that are
defective in ethylene responses. Our results suggested that an ethylene signal is required, but not solely responsible, for the induction of
ADH during hypoxia.
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RESULTS |
Effects of AOA on the Hypoxic Induction of
ADH:: -glucuronidase (GUS) Transgene
Ethylene is synthesized from S-adenosyl-Met (SAM)
via ACC (Adams and Yang, 1979 ). AOA is a competitive inhibitor of ACC
synthase, which catalyzes the conversion of SAM to ACC (Yang and
Hoffman, 1984 ; Abeles et al., 1992 ). We used the AG2 Arabidopsis
transgenic line, which contains an ADH promoter and
GUS-coding region fusion (Conley et al., 1999 ), to examine
the effect of AOA on the hypoxic induction of ADH.
Arabidopsis plants were subjected to hypoxic treatment for 24 h in
the presence of different concentrations of AOA. The data show that
there was a dosage-dependent inhibition of hypoxic induction of the
ADH::GUS transgene by AOA (Fig.
1). Hypoxic treatment resulted in an 8- to 10-fold increase in GUS activity as compared with the normoxic
controls (Fig. 1, columns 1 and 2). The addition of 100 µM AOA resulted in nearly a 50% reduction in
the accumulation of GUS activity during hypoxia (Fig. 1). However,
further increases in concentrations of AOA resulted in no further
reduction in levels of GUS activity. The partial inhibitory effect of
AOA could be reversed by the addition of 10 µM
ACC (Fig. 1, column 8) and completely reversed by 50 to 100 µM ACC (Fig. 1). These results suggest that an
ethylene signal may be involved in the hypoxic induction of
ADH and that AOA exerted its effect by blocking the
biosynthesis of ethylene.

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Figure 1.
Dosage effect of AOA on the hypoxic induction of
the ADH::GUS transgene in AG2 plants. AG2 plants
were subjected to hypoxic treatment for 28 h in the presence of
different concentrations of AOA (columns 2-7 on the left) or of 100 µM AOA plus various concentrations of ACC
(right) and were harvested for GUS enzyme activity assays. Column 1 is
the GUS activity from AG2 plants grown under normoxic conditions. GUS
activity is expressed as pmol of 4-methylumbelliferone (4-MU)
min 1 mg 1 protein. The
data presented are the average of the determinations from three
separate hypoxic treatments done on separate occasions. Plants grown at
different times were used for replicated treatments. Bars represent
SD.
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Temporal Expression Patterns of the ADH Gene during
Hypoxia
We next examined the effect of AOA on the temporal expression of
the ADH::GUS transgene during hypoxia. Figure
2 shows that there was a gradual increase
in GUS activity during the hypoxic treatment of AG2 plants, reaching a
maximum at 28 h of hypoxic treatment. The addition of 100 µM AOA resulted in a 30% to 50% reduction in
the accumulation of GUS activity in later stages of hypoxia. When ACC
was included in the medium, the inhibitory effect of AOA was mostly
reversed (Fig. 2). However, there was no significance difference in GUS
activity between the controls and AOA-treated plants at early stages of
hypoxia.

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Figure 2.
Effects of AOA and ACC on temporal expression of
the ADH::GUS transgene in AG2. AG2 plants were
subjected to hypoxic treatment in different media. At different times,
samples were harvested and assayed for GUS activity. Bar graphs at each
time point (from left to right) represent activities from hypoxic
treatment in Murashige and Skoog medium, Murashige and Skoog medium
containing 100 µM AOA, or 100 µM AOA plus 100 µM ACC.
GUS activity is expressed as pmol 4-MU min 1
mg 1 protein. The data presented are the average
of six independent hypoxic treatments. Bars represent
SD.
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Northern-blot analysis was used to examine the effect of AOA and ACC on
the temporal expression pattern of the endogenous ADH gene
during hypoxia. The results from one set of representative northern
blots are illustrated in Figure 3. The
nuclear gene ACT2 that encodes actin from Arabidopsis, the
expression of which was not affected by growth conditions (An et al.,
1996 ; M.-C. Shih, unpublished data), was used as an RNA loading
standard. Quantification of northern blots indicated that
ADH mRNA levels increased gradually during hypoxia, reaching
a maximal level after 24 to 28 h of hypoxic treatment (Fig. 3A).
This pattern of mRNA accumulation for the endogenous ADH
gene during hypoxia is very similar to that of the
ADH::GUS transgene shown in Figure 2. As with GUS
activity, the addition of AOA and ACC had no apparent effect on
ADH mRNA levels during early stages of hypoxia (Fig. 3, B
and C). At later stages of hypoxia, the addition of AOA resulted in
30% to 50% reduction in levels of ADH mRNA (Fig. 3B).
However, when ACC was added, the inhibitory effect of AOA was mostly
reversed (Fig. 3C). Taken together, these results suggest that an
ethylene signal contributes to the induction of the ADH gene
at later stages during hypoxia.

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Figure 3.
Effects of AOA and ACC on the accumulation of
ADH mRNA during hypoxia. AG2 plants were subjected to
hypoxic treatment in Murashige and Skoog medium (A), Murashige and
Skoog medium containing 100 µM AOA (B), or 100 µM AOA plus 100 µM ACC
(C). Total RNA (10 µg) samples from these plants were fractionated by
agarose gel electrophoresis and were hybridized to the ADH
or ACT2 probes. The numbers on top of each lane represent
the time (in hours) under hypoxia. Each northern-blot analysis was
repeated three times using RNAs prepared from three independent hypoxic
treatments.
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Production of Ethylene during Hypoxia
If ethylene is involved in the hypoxic induction of
ADH, one would expect an increase in ethylene production in
hypoxic-treated Arabidopsis. To investigate this possibility, AG2
plants were subjected to different lengths of hypoxic treatment and
were harvested for measurement of ethylene production. The production
of ethylene increased rapidly in the first 4 h of hypoxic
treatment (Fig. 4). Rates of ethylene
production remained roughly constant between 8 and 16 h. Between
20 and 24 h of hypoxia, there was a second increase in the rate of
ethylene production. However, ethylene production started to decrease
after 28 h of hypoxia. This pattern of hypoxia-induced ethylene
production is similar to that of flooded tomato plants (Olson et al.,
1995 ; Shiu, et al., 1998 ).

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Figure 4.
Production of ethylene in AG2 during hypoxia. AG2
plants subjected to hypoxic treatment ( ) or normoxic treatment ( )
for different time periods were harvested and assayed for ethylene
production as described in "Materials and Methods." The mean of two
independent hypoxic treatments is plotted. Bars represent
SD.
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Ethylene Alone Is Not Sufficient to Induce ADH
under Normoxia
Two experiments were performed to determine whether ethylene alone
is sufficient to activate ADH gene without a hypoxic signal. First, we investigated whether applying exogenous ethylene can induce
ADH gene expression under normoxic conditions. Two- to 3-week-old plants were transferred to liquid Murashige and Skoog media
containing 10 µM ethephon, which is an
ethylene-generating compound (Abeles et al., 1992 ), and bubbled
continuously with air. The data showed that ethephon alone could not
induce the ADH::GUS transgene (Fig.
5A) or the endogenous ADH gene
(Fig. 5B) in AG2 plants under normoxia. Second, we found that
eto1-1, a mutant that overproduces ethylene in etiolated
seedlings (Woeste et al., 1999 ), also produces a higher level of
ethylene under growth conditions used in our laboratory. This ethylene
level is comparable with that of AG2 under hypoxia (data not shown). When eto1-1 plants were subjected to normoxic treatment,
there was no induction of ADH activity (Fig. 5B). In a similar manner, there was no detectable ADH mRNA level in eto1-1
plants grown under normoxic conditions. In addition, we found that
ADH is induced by hypoxia in eto1-1 plants to the
same extent as in wild-type plants (data not shown). Taken together,
these results show that an addition of exogenous ethylene or an
increase in cellular ethylene alone is not enough to activate the
transcription of ADH. Therefore, we conclude that ethylene
is required, but not sufficient for, the induction of ADH
during hypoxia.

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Figure 5.
Effects of ethylene on the expression of
ADH in plants under hypoxia, normoxia, or normoxia plus
ethephon treatment. GUS and ADH activities of AG2 and eto1-1
plants subjected to various treatments were determined. Bar graphs at
each time point (from left to right) represent activities for AG2 under
hypoxia, AG2 under normoxia, AG2 under normoxia with 10 µM ethephon added, and (B only)
eto1-1 under normoxia. GUS activity is expressed as pmol
4-MU min 1 mg 1 protein.
A unit of ADH enzyme is defined as an increase in the production of 1 nmol NADH min 1 mg 1
protein. The data presented are the average of three independent
experiments done on separate occasions. Error bars indicate
SD.
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Hypoxic Induction of ADH Is Affected in
etr1-1 and ein2-1
Several different classes of mutants that fail to display the
triple response in the presence of saturating levels of exogenously applied ethylene have been isolated (Guzman and Ecker, 1990 ; Roman et
al., 1995 ). We chose to examine temporal expression patterns of
ADH during hypoxia in two of these mutants,
etr1-1 and ein2-1. The ETR1 gene was
identified and found to encode a receptor protein with homology to
two-component regulators (Chang et al., 1993 ). Although ETR
is present as a small gene family in Arabidopsis, mutations in one of
the ETR genes result in a dominant phenotype and cause
defects in many ethylene responses. EIN2 was shown to be a bifunctional
transducer and may mediate crosstalk between ethylene and stress
responses (Alonso et al., 1999 ).
Northern-blot analysis shows that ADH mRNA levels increased
during hypoxia in etr1-1 (Fig.
6A) and ein2-1 (Fig. 6B).
These blots were quantified using the ADH mRNA level from
AG2 plants treated with 24 h of hypoxia (Fig. 6, A and B, lane 1)
as 100%. Levels of ADH mRNA were similar among
etr1-1, ein2-1, and AG2 in the first 4 to 8 h of hypoxic treatment (Fig. 6C). However, ADH mRNA levels
in etr1-1 and ein2-1were about 30% to 50% lower than those of AG2 between 12 and 36 h of hypoxic treatment (Fig. 6C). These results indicated that mutations affecting ethylene responses could also affect the induction of ADH gene at
later stages of hypoxia.

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Figure 6.
Hypoxic induction of ADH in
etr1-1 and ein2-1. RNA samples from
etr1-1 (A) and ein2-1 (B) subjected to hypoxic
treatment were analyzed by northern-blot analysis. Digitized images of
the ADH bands were quantified and normalized to the
ACT2 band in each lane using the National Institutes of
Health Image Analysis Program 1.62f. The normalized ADH mRNA
level from 24-h hypoxic-treated AG2 plants (lane 1) was used as the
100% level. The quantification data presented in C are the average of
three independent hypoxic treatments. Bars indicate
SD.
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DISCUSSION |
Two cellular changes are known to occur in plants under oxygen
deficiency: switching from aerobic respiration to anaerobic fermentation and the formation of aerenchyma tissues (Drew, 1997 ). Switching from aerobic respiration to anaerobic fermentation involves the induction of glycolytic and fermentative genes. Although much progress had been made in recent years in the identification of cis-
and trans-acting regulatory elements of the hypoxic inducible genes,
how the hypoxic signal is transduced in plant cells to trigger these
cellular changes remains largely unknown.
Our studies indicated that ethylene, which is known to be involved in
various stress responses in different plant species, is involved in the
hypoxic induction of the ADH gene in Arabidopsis. We showed
that AOA, which is an inhibitor of ACC synthase and hence an inhibitor
of ethylene biosynthesis, could reduce the hypoxic induction of
ADH::GUS transgene in a dosage-dependent manner
(Fig. 1). However, AOA is also known to inhibit other processes such as
Gly oxidation (Dry and Wiskich, 1986 ). The inhibitory effect of AOA on
the hypoxic induction of ADH, therefore, could be due to its
effect on ethylene production or on other cellular metabolism. If the
response is mediated by an ethylene signal, an addition of ACC to the
medium should reverse the inhibitory effect of AOA. Our data showed
that when 50 to 100 µM of ACC is added, the
inhibition of AOA on the induction of the ADH::GUS transgene during hypoxia was mostly reversed (Fig. 1). The amounts of
ACC required to reverse the inhibitory effect of AOA on ADH induction is greater than the amounts required to elicit the triple response in etiolated Arabidopsis seedlings. It has been shown that ACC
at concentrations between 10 and 100 µM has a
saturating effect on the triggering of triple responses in etiolated
Arabidopsis seedlings (Luschnig et al., 1998 ). For most plant species,
the conversion of SAM to ACC, which is catalyzed by ACC synthase, is
the rate-limiting step during ethylene biosynthesis (Yang and Hoffman,
1984 ). However, the conversion of ACC to ethylene, which is catalyzed
by ACC oxidase, requires oxygen. It is likely that the conversion of
ACC to ethylene would become rate limiting under very low oxygen
concentration. If this were the case, higher cellular levels of ACC
will be needed as a substrate to synthesize sufficient amounts of
ethylene in hypoxic-treated plants. It was found that the conversion of
ACC to ethylene becomes the rate-limiting step for ethylene synthesis
during submergence of Rumex palustris and that higher
cellular ACC levels were observed in submerged R. palustris
plants (Banga et al., 1996 ; Vriezen et al., 1999 ).
There are two major classes of ethylene response mutants in
Arabidopsis. One involves mutants that display constitutive triple ethylene responses, which result from either ethylene overproduction (eto1, eto2, and eto3) or constitutive
activation of the pathway (ctr1), and the other involves
mutants that are insensitive to ethylene, which can be due to defects
in their ability to perceive (etrt1, etr2,
ein4, ers, and other receptor mutants) or respond (ein2, ein3, and ein5) to ethylene
(Guzman and Ecker, 1990 ; Roman et al., 1995 ). The analysis of these
mutants has allowed much progress in elucidating the mechanisms of
ethylene perception and signal transduction (for review, see Kieber,
1997 ; Bleecker et al., 1998 ; Johnson and Ecker, 1998 ; Theologis, 1998 ).
Since we found that ethylene may contribute to the signaling pathways leading to the induction of ADH during hypoxia, we expect
that hypoxic induction of ADH will be affected by mutations
in the ethylene-insensitive class. Our studies showed that
ADH mRNA levels in etr1-1 and ein2-1
were about 30% to 50% lower than those of AG2 during hypoxia (Fig.
6). In a similar manner, we found that levels of ADH activity in both
mutants were lower than those of AG2 during hypoxia (data not shown).
These results provide supporting evidence for the involvement of
ethylene in the hypoxic induction of ADH in Arabidopsis.
Our observation that AOA could not completely block the hypoxic
induction of ADH (Fig. 1) suggests that an
ethylene-independent pathway is also involved. Consistent with this
hypothesis, we found that AOA is effective in reducing the expression
of ADH::GUS transgene (Fig. 2) and the
endogenous ADH (Fig. 3) only in later stages of hypoxia. In
contrast, there is no apparent difference in levels of GUS activity and
ADH mRNA in early stages of hypoxia between hypoxic-treated
AG2 plants in the absence or presence of AOA. In a similar manner, we
found that ADH mRNA levels in etr1-1 and
ein2-1were reduced in later stages, but not in earlier stages, during hypoxia (Fig. 6). These results can best be interpreted as that two signaling pathways, one ethylene-independent and one ethylene-dependent, are involved in the hypoxic induction of
ADH in Arabidopsis and that AOA and mutations in
etr1-1 and ein2-1 affect only the
ethylene-dependent pathway.
Ethylene is involved in many physiological and developmental processes
in plants (Yang and Hoffman, 1984 ; Kende, 1993 ). In some instances,
ethylene function requires a concomitant contribution of other
signaling molecules (Penninckx et al., 1998 ). In fact, it was
shown that an addition of exogenous ethylene could not induce the
formation of aerenchyma in anoxic roots in maize, although ethylene is
required for the hypoxia-induced aerenchyma formation (He et al., 1994 ,
1996 ; Drew, 1997 ). It was reported that an addition of AOA completely
inhibits the induction by flooding of a xyloglucan endo-transglycosylase gene in maize roots (Saab and Sachs, 1996 ). Under
the same condition, the induction of the ADH1 gene decreased slightly. These results suggest that an ethylene-signaling pathway is
sufficient for the induction of the xyloglucan endo-transglycosylase gene and that an ethylene-independent pathway is mainly responsible for
the induction of ADH1 in flooded maize roots. In
Arabidopsis, we found that an application of exogenous ethylene or an
increased cellular ethylene in eto1-1 is not capable of
inducing the expression of ADH during normoxia. These
results suggest that ethylene is necessary, but not solely responsible,
for the induction of ADH during hypoxia.
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MATERIALS AND METHODS |
Growth Conditions and Stress Treatment
Seeds of Arabidopsis AG2 were surface sterilized and treated
with 15 µM gibberellin at 4°C overnight. Seeds
were sown onto plates with Murashige and Skoog medium containing 1%
(w/v) Suc and 0.8% (w/v) agar and were grown at 20°C with
16-h light/8-h dark cycles. After 1 week, seedlings were transferred to
fresh Murashige and Skoog plates containing 2% (w/v) agar and were
grown for additional 7 to 10 d with plates in vertical positions.
For hypoxic treatments, plants were submerged in liquid Murashige and
Skoog medium through which gas containing 4.5% to 5% (w/v) oxygen and
balanced with nitrogen was bubbled continuously.
GUS and ADH Enzymatic Assays
GUS enzyme activity assays were performed essentially as
described by Jefferson et al. (1987) . Fluorescence of the
4-methylumbelliferyl product was quantified using a minifluorometer
(model TKO-100, Hoefer Scientific Instruments, San Francisco). ADH
activity assay was performed according to the procedures described in
Xie and Wu (1989) . The assay uses ethanol as the substrate and measures the production of NADH. Measurement of NADH formation was performed in
a spectrophotometer (DU 64, Beckman Instruments, Fullerton, CA). A unit
of ADH is defined as the production of 1 nmol of NADH min 1 mg 1 protein.
RNA Isolation and Northern-Blot Analysis
Total RNA was isolated by an acidic phenol protocol adapted from
the procedures described by Chomczynski and Sacchi (1987) . RNA samples
(10 µg) were denatured in 6.5% (w/v) formaldehyde/50% (w/v)
formamide at 65°C and electrophoresed through 1.2% (w/v) agarose
gels with 6.5% (w/v) formaldehyde/1× MOPS
[3-(N-morpholino)-propanesulfonic acid] buffer as
described in Sambrook et al. (1989) . RNA was transferred to a
Magnacharge 0.45-µm nylon membrane (Micron Separations, Westborough, MA) overnight in 10× SSC and 0.1% (w/v) SDS. Filters were hybridized with random primer-labeled cDNA probes (Feinberg and Vogelstein, 1983 ). Final post-hybridization washings were performed at
65°C in 0.1× SSC/0.1% (w/v) SDS. The hybridization probes were as
follows: ADH, a 525-bp cDNA fragment generated from
reverse transcriptase-PCR based on the sequence from Chang and
Meyerowitz (1986) ; and ACT2, a 800-bp cDNA fragment for
Arabidopsis Actin2 gene generated by reverse transcriptase-PCR
based on the sequence from An et al. (1996) . Membranes were exposed to
film (XAR-5, Eastman-Kodak, Rochester, NY) with intensifying screens at
70°C. Quantification was performed by scanning autoradiograms and
analyzing the images using the National Institutes of Health Image
Analysis Program 1.62f.
Measurement of Ethylene Production
AG2 plants were grown and subjected to hypoxic treatment exactly
as described in prior sections. At different time intervals, 10 plants
were collected in a 13 × 100-mm test tube and capped for 1 h
at room temperature. The amounts of ethylene produced were measured as
described by Jackson and Campbell (1976) .
Chemicals and Seeds
AOA, gibberellin A3, antibiotics, and other
chemicals were purchased from Sigma Chemical (St. Louis).
5-Bromo-4-chloro-3-indolyl- -D-GlcUA cyclohexylammonium
salt was purchased from Gold Biotechnology (St. Louis). Restriction and
modification enzymes were from New England BioLabs (Boston) and Promega
(Madison, WI). Seed stocks for etr1-1 and
ein2-1 were obtained from the Arabidopsis Biological Resources Center at the Ohio State University.
 |
ACKNOWLEDGMENTS |
We thank Drs. Richard Sjölund and Wei-Yeh Wang for
comments on the manuscript. We also thank Su-Jen Chou for her
assistance in the measurement of ethylene production.
 |
FOOTNOTES |
Received October 23, 2000; returned for revision December 15, 2000; accepted January 9, 2001.
1
This work was supported by the U.S. Department
of Agriculture National Research Initiative Competitive Grants Program
(grant nos. 9900647 and 2000-00665 to M.-C.S.).
*
Corresponding author; e-mail mcshih{at}blue.weeg.uiowa.edu; fax
319-335-3620.
 |
LITERATURE CITED |
-
Abeles FB, Morgan PW, Saltveit ME
(1992)
Chapter 7.
In
Ethylene in Plant Biology, Ed 2. Academic Press, New York, pp 264-285
-
Adams DO, Yang SF
(1979)
Ethylene biosynthesis: identification of 1-aminocyclopropane 1-carboxylic acid as an intermediate in the conversion of methionine to ethylene.
Proc Natl Acad Sci USA
76: 170-174[Abstract/Free Full Text]
-
Alonso JM, Hirayama T, Roman G, Nourizadeh S, Ecker JR
(1999)
EIN2, a bifunctional transducer of ethylene and stress responses in Arabidopsis.
Science
284: 2148-2152[Abstract/Free Full Text]
-
An Y-Q, McDowell JM, Huang S, McKinney EC, Chambliss S, Meagher RB
(1996)
Strong, constitutive expression of the Arabidopsis ACT2/ACT8 actin subclass in vegetative tissues.
Plant J
10: 107-121[CrossRef][Web of Science][Medline]
-
Bailey-Serres J, Dawe RK
(1996)
Both 5' and 3' sequences of maize adh1 mRNA are required for enhanced translation under low-oxygen conditions.
Plant Physiol
112: 685-695[Abstract]
-
Banga M, Slaa EJ, Blom CWPM, Voesenek LACJ
(1996)
Ethylene biosynthesis and accumulation under drained and submerged conditions.
Plant Physiol
112: 229-237[Abstract]
-
Bleecker AB, Esch JJ, Hall AE, Rodriguez FI, Binder BM
(1998)
The ethylene-receptor family from Arabidopsis: structure and function.
Philos Trans Roy Soc Lond B
353: 1405-1412[Abstract/Free Full Text]
-
Campbell R, Drew MC
(1983)
Electron microscopy of gas space (aerenchyma) formation in adventitious roots of Zea mays L. subjected to oxygen shortage.
Planta
157: 350-357[CrossRef][Web of Science]
-
Chang C, Kwok SF, Bleecker AB, Meyerowitz E
(1993)
Arabidopsis ethylene-response gene ETR1: similarity of product to two-component regulators.
Science
262: 539-544[Abstract/Free Full Text]
-
Chang C, Meyerowitz E
(1986)
Molecular cloning and DNA sequence of the Arabidopsis thaliana alcohol dehydrogenase gene.
Proc Natl Acad Sci USA
83: 1408-1412[Abstract/Free Full Text]
-
Chang WP, Hunag L, Shen M, Webster C, Burlingame A, Roberts JKM
(2000)
Patterns of protein synthesis and tolerance of anoxia in root tips of maize seedlings acclimated to a low oxygen environment, and identification of proteins by mass spectrometry.
Plant Physiol
122: 295-318[Abstract/Free Full Text]
-
Chomczynski P, Sacchi N
(1987)
Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.
Anal Biochem
162: 156-160[Web of Science][Medline]
-
Chung H-J, Ferl RJ
(1999)
Arabidopsis alcohol dehydrogenase expression in both shoots and roots is conditioned by root growth environment.
Plant Physiol
121: 429-436[Abstract/Free Full Text]
-
Conley TR, Peng H-P, Shih M-C
(1999)
Mutations affecting induction of glycolytic and fermentative genes during germination and environmental stresses in Arabidopsis.
Plant Physiol
119: 599-607[Abstract/Free Full Text]
-
Dolferus R, Jacobs M, Peacock W, Dennis E
(1994)
Differential interactions of promoter elements in stress responses of the Arabidopsis Adh gene.
Plant Physiol
105: 1075-1087[Abstract]
-
Drew MC
(1997)
Oxygen deficiency and root metabolism: injury and acclimation under hypoxia and anoxia.
Annu Rev Plant Physiol Plant Mol Biol
48: 223-250[CrossRef][Web of Science][Medline]
-
Drew MC, He C-J, Morgan PW
(2000)
Programmed cell death and aerenchyma formation in roots.
Trends Plant Sci
5: 123-127[CrossRef][Web of Science][Medline]
-
Dry I, Wiskich JT
(1986)
Comparative aspects of aminooxyacetate inhibition of glycin oxidation and aminotransferase activity of pea leaf mitochondria.
Plant Sci
44: 33-28
-
Feinberg AP, Vogelstein B
(1983)
A technique for radiolabeling restriction endonuclease fragments to high specific activity.
Anal Biochem
132: 6-13[CrossRef][Web of Science][Medline]
-
Fennoy SL, Bailey-Serres J
(1995)
Post-transcriptional regulation of gene expression in oxygen-deprived roots of maize.
Plant J
7: 287-295[CrossRef][Web of Science]
-
Ferl R, Laughner B
(1989)
In vivo detection of the regulatory factor binding sites of Arabidopsis thaliana Adh.
Plant Mol Biol
12: 357-366
-
Guzman P, Ecker JR
(1990)
Exploiting the triple response of Arabidopsis to identify ethylene-related mutants.
Plant Cell
2: 513-523[Abstract/Free Full Text]
-
He C-J, Drew MC, Page WM
(1994)
Induction of enzymes associated with lysogenous aerenchyma formation in roots of Zea mays during hypoxia or nitrogen-starvation.
Plant Physiol
105: 861-865[Abstract]
-
He C-J, Page WM, Drew MC
(1996)
Transduction of an ethylene signal is required for cell death and lysis in the root cortex of maize during aerenchyma formation induced by hypoxia.
Plant Physiol
112: 463-472[Abstract]
-
Hoeren FU, Dolferus R, Wu Y, Peacock WJ, Dennis ES
(1998)
Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) low oxygen.
Genetics
149: 479-490[Abstract/Free Full Text]
-
Jackson MB, Campbell DJ
(1976)
Production of ethylene by excised segments of plant tissue prior to the effect of wounding.
Planta
129: 273-274[CrossRef]
-
Jefferson RA, Kavanagh TA, Bevan MW
(1987)
GUS fusion:
-glucuronidase as a sensitive and versatile gene fusion marker in higher plants.
EMBO J
6: 3901-3907[Web of Science][Medline] -
Johnson PR, Ecker JR
(1998)
The ethylene gas signal transduction pathway: a molecular perspective.
Annu Rev Genet
32: 227-254[CrossRef][Web of Science][Medline]
-
Justin SHF, Armstrong W
(1987)
The anatomical characteristics of roots and plant response to soil flooding.
New Phytol
106: 465-495
-
Kende H
(1993)
Ethylene biosynthesis.
Annu Rev Plant Physiol Plant Mol Biol
44: 283-307[CrossRef][Web of Science]
-
Kieber JJ
(1997)
The ethylene response pathway in Arabidopsis.
Annu Rev Plant Physiol Plant Mol Biol
48: 277-296[CrossRef][Web of Science][Medline]
-
Kyozuka J, Olive M, Peacock W, Dennis E, Shimamoto K
(1994)
Promoter elements required for developmental expression of the maize Adh1 gene in transgenic rice.
Plant Cell
6: 799-810[Abstract]
-
Luschnig C, Gaxiola RA, Grisafi P, Fink GR
(1998)
EIR1, a root-specific protein involved in auxin transport, is required for gravitropism in Arabidopsis thaliana.
Gene Dev
12: 2175-2187[Abstract/Free Full Text]
-
Olson DC, Oetiker JH, Yang SF
(1995)
Analysis of LE-ACS3, a 1-aminocyclopropane-1-carboxylic acid synthase gene expressed during flooding in the roots of tomato plants.
J Biol Chem
270: 14056-14061[Abstract/Free Full Text]
-
Penninckx IA, Thomma BP, Buchala A, Metraux JP, Broekaert WF
(1998)
Concomitant activation of jasmonate and ethylene response pathways is required for induction of a plant defensin gene in Arabidopsis.
Plant Cell
10: 2103-2113[Abstract/Free Full Text]
-
Roberts JK, Callis J, Jardetsky O, Walbot V, Freeling M
(1984b)
Cytoplasmic acidosis as a determinant of flooding intolerance in plants.
Proc Natl Acad Sci USA
81: 6029-6033[Abstract/Free Full Text]
-
Roberts JK, Callis J, Wemmer D, Walbot V, Jardetsky O
(1984a)
Mechanisms of cytoplasmic pH regulation in hypoxic maize root tips and its role in survival under hypoxia.
Proc Natl Acad Sci USA
81: 6029-6033
-
Roman G, Lubarsky B, Kieber JJ, Rothenberg M, Ecker JR
(1995)
Genetic analysis of ethylene signal transduction in Arabidopsis thaliana: five novel mutant loci integrated into a stress response pathway.
Genetics
139: 1393-1409[Abstract]
-
Saab I, Sachs MM
(1996)
A flooding-induced xyloglucan endo-transglycosylase homolog in maize is responsive to ethylene and associated with aerenchyma.
Plant Physiol
112: 385-391[Abstract]
-
Sachs MM, Freeling M, Okimoto R
(1980)
The anaerobic proteins of maize.
Cell
20: 761-767[CrossRef][Web of Science][Medline]
-
Sachs MM, Subbaiah CC, Sabb IN
(1996)
Anaerobic gene expression and flooding tolerance in maize.
J Exp Bot
47: 1-15
-
Sambrook J, Fritsch EF, Maniatis T, eds
(1989)
Molecular Cloning: A Laboratory Manual, Ed 2. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sedbrook JC, Kronebusch PJ, Borisy GG, Trewavas AJ, Masson PH
(1996)
Transgenic aequorin reveals organ-specific cytosolic Ca2+ responses to anoxia in Arabidopsis thaliana seedlings.
Plant Physiol
111: 243-257[Abstract]
-
Shiu OY, Oetiker JH, Yip WK, Yang SF
(1998)
The promoter of LE-ACS7, an early flooding-induced 1-aminocyclopropane-1-carboxylate synthase gene of the tomato, is tagged by a Sol3 transposon.
Proc Natl Acad Sci USA
95: 10334-10339[Abstract/Free Full Text]
-
Subbaiah CC, Bush DS, Sachs MM
(1994a)
Elevation of cytosolic calcium precedes anoxic gene expression in maize suspension-cultured cells.
Plant Cell
6: 1747-1762[Abstract/Free Full Text]
-
Subbaiah CC, Zhang J, Sachs MM
(1994b)
Involvement of intracellular calcium in anaerobic gene expression and survival of maize seedlings.
Plant Physiol
105: 369-376[Abstract]
-
Theologis A
(1998)
Ethylene signaling: redundant receptors all have their say.
Curr Biol
8: R875-R878[Medline]
-
Vriezen WH, Hulzink R, Mariani C, Voesenek LACJ
(1999)
1-aminocyclopropane-1-carboxylate oxidase activity limits ethylene biosynthesis in Rumex palustris during submergence.
Plant Physiol
121: 189-196[Abstract/Free Full Text]
-
Woeste KE, Ye C, Kieber J
(1999)
Two Arabidopsis mutants that overproduce ethylene are affected in the post-transcriptional regulation of 1-aminocyclopropane-1-carboxylic acid synthase.
Plant Physiol
119: 521-529[Abstract/Free Full Text]
-
Xia JH, Saglio PH
(1992)
Lactic acid efflux as a mechanism of hypoxic acclimation of maize tips to anoxia.
Plant Physiol
100: 40-46[Abstract/Free Full Text]
-
Xie Y, Wu R
(1989)
Rice alcohol dehydrogenase genes: anaerobic induction, organ-specific expression and characterization of cDNA clones.
Plant Mol Biol
13: 53-56[CrossRef][Web of Science][Medline]
-
Yang SF, Hoffman NE
(1984)
Ethylene biosynthesis and its regulation in higher plants.
Annu Rev Plant Physiol
35: 155-189[CrossRef][Web of Science]
-
Yang Y, Kwon HB, Peng H-P, Shih M-C
(1993)
Stress responses and metabolic regulation of glyceraldehyde-3-phosphate dehydrogenase genes in Arabidopsis.
Plant Physiol
101: 209-216[Abstract]
© 2001 American Society of Plant Physiologists
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