First published online September 20, 2002; 10.1104/pp.005892
Plant Physiol, October 2002, Vol. 130, pp. 757-769
Two Distinct Jacalin-Related Lectins with a Different Specificity
and Subcellular Location Are Major Vegetative Storage Proteins in the
Bark of the Black Mulberry Tree1
Els J.M.
Van Damme,2 *
Bettina
Hause,
Jialiang
Hu,3
Annick
Barre,
Pierre
Rougé,
Paul
Proost, and
Willy J.
Peumans
Laboratory for Phytopathology and Plant Protection, Katholieke
Universiteit Leuven, 3001 Leuven, Belgium (E.J.M.V.D., J.H., W.J.P.);
Institute of Plant Biochemistry, D-06018 Halle, Germany (B.H.);
Institut de Pharmacologie et Biologie Structurale, Unité Mixte
Recherche-Centre National de la Recherche Scientifique 5089, 31077 Toulouse cedex, France (A.B., P.R.); and Rega Institute, Laboratory of
Molecular Immunology, Katholieke Universiteit Leuven, 3000 Leuven,
Belgium (P.P.)
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ABSTRACT |
Using a combination of protein isolation/characterization and
molecular cloning, we have demonstrated that the bark of the black
mulberry tree (Morus nigra) accumulates large quantities of a galactose-specific (MornigaG) and a mannose (Man)-specific (MornigaM) jacalin-related lectin. MornigaG resembles jacalin with
respect to its molecular structure, specificity, and co- and
posttranslational processing indicating that it follows the secretory
pathway and eventually accumulates in the vacuolar compartment. In
contrast, MornigaM represents a novel type of highly active Man-specific jacalin-related lectin that is synthesized without signal
peptide or other vacuolar targeting sequences, and accordingly, accumulates in the cytoplasm. The isolation and cloning, and
immunocytochemical localization of MornigaG and MornigaM not only
demonstrates that jacalin-related lectins act as vegetative storage
proteins in bark, but also allows a detailed comparison of a vacuolar
galactose-specific and a cytoplasmic Man-specific jacalin-related
lectin from a single species. Moreover, the identification of MornigaM
provides the first evidence, to our knowledge, that bark cells
accumulate large quantities of a cytoplasmic storage protein. In
addition, due to its high activity, abundance, and ease of preparation,
MornigaM is of great potential value for practical applications as a
tool and bioactive protein in biological and biomedical research.
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INTRODUCTION |
Many flowering plants from diverse
taxonomic groups accumulate large quantities of so-called vegetative
storage proteins (VSPs) in various vegetative storage organs. These
VSPs play a primary role in nitrogen accumulation, storage, and
distribution in biennial and perennial plants, and, accordingly, are
believed to contribute to the survival of the plant in its natural
environment (Staswick, 1994 ). Moreover, some VSPs with a particular
enzymatic or other biological activity act as aspecific defense
proteins against herbivorous animals or phytophagous invertebrates, for
example, and hence may play a dual storage/defense role (Peumans and
Van Damme, 1995 ; Yeh et al., 1997 ).
The concept of functional "vegetative" homologs of the classic seed
storage proteins was originally developed for two proteins, called
VSP and VSP , that accumulate in large quantities in soybean (Glycine max) leaves, seed pods, and hypocotyls
forced to act as a nitrogen sink (Staswick, 1989a , 1989b ). However, it
is evident that the term VSP also applies to the previously identified
major tuber proteins from potato (Solanum tuberosum;
patatin, Mignery et al., 1984 ) and sweet potato (Ipomoea
batatas; sporamin, Maeshima et al., 1985 ), as well as to all other
abundant proteins found in various vegetative storage organs like
bulbs, tubers, and rhizomes. VSPs are also common in the bark of
deciduous trees. Studies with poplar (Populus deltoides;
Coleman et al., 1991 ), elderberry (Sambucus nigra;
Nsimba-Lubaki and Peumans, 1986 ), and several legume trees not only
demonstrated the occurrence of abundant bark-specific VSPs, but also
led to the identification of some of these bark VSPs.
All bark VSPs identified thus far are carbohydrate-binding proteins
(lectins) or are closely related homologs devoid of
carbohydrate-binding activity. Most of these lectins or lectin-related
proteins have been found in legume trees and belong to the family of
legume lectins. Well-known examples are the abundant lectins in the
bark of yellow wood (Cladrastis lutea; Van Damme et al.,
1995a ), Maackia amurensis (Van Damme et al., 1997b ), black
locust (Robinia pseudoacacia; Van Damme et al., 1995c ), and
Japanese pagoda tree (Sophora japonica; Hankins et al.,
1988 ; Van Damme et al., 1997a ). In contrast, the abundant bark lectins
found in elderberry and other Sambucus species (Nsimba-Lubaki et al., 1986 ) belong to the family of type-2
ribosome-inactivating proteins, which are structurally and
evolutionarily unrelated to the legume lectins (Van Damme et al.,
1998 ). Thus far, no representatives of any of the other five lectin
families (i.e. the amaranthins, the chitin-binding lectins comprising
hevein domains, the Cucurbitaceae phloem lectins, the jacalin-related
lectins [JRLs], and the monocot Man-binding lectins) have been
identified as bark-specific VSPs (Van Damme et al., 1998 ). The apparent
absence of these lectin families from bark is somewhat surprising
because numerous monocot Man-binding lectins, several jacalins, and
some chitin-binding lectins are abundant VSPs in bulbs, tubers, or
rhizomes (Van Damme et al., 1998 ). To corroborate the possible
occurrence of abundant bark lectins other than legume lectins or type-2
ribosome-inactivating proteins, several Moraceae species were checked
for the presence of bark-specific JRLs. Thereby, it was observed that
the bark of the black mulberry (Morus nigra) tree
accumulates high concentrations of a Gal- and a Man-specific JRL.
It should be mentioned here that at present, the family of JRLs is
subdivided into Gal- and Man-specific agglutinins (Van Damme et al.,
1998 ; Peumans et al., 2000a ). Jacalin and its Gal-specific homologs are
made up of four identical protomers each consisting of a heavy ( )
and a light ( ) polypeptide chain. Both chains are derived from a
large preproprotein through a complex co- and posttranslational
processing, but they remain together by noncovalent interactions.
Jacalin follows the secretory pathway and eventually accumulates in
storage protein vacuoles (Peumans et al., 2000a ). Hitherto,
Gal-specific homologs of jacalin have exclusively been found in seeds
of Artocarpus species (Moreira and Ainouz, 1981 ) and Osage
orange (Maclura pomifera; Bausch and Poretz, 1977 ), indicating that the Gal-specific JRLs are confined to a small taxonomic
group. The Man-specific JRLs consist of two, four, or eight
"intact" protomers. They are synthesized and located in the
cytoplasm and undergo no co- or posttranslational proteolytic modification (Peumans et al., 2000a ). Man-specific JRLs have been isolated from species belonging to a wide range of taxonomic groups, including hedge bindweed (Calystegia sepium, family
Convolvulaceae; Van Damme et al., 1996 ; Peumans et al., 1997 ),
Jerusalem artichoke (Helianthus tuberosus, family
Asteraceae; Van Damme et al., 1999 ), jack fruit (Artocarpus
integrifolia, Moraceae; Rosa et al., 1999 ), rice (Oryza
sativa, family Gramineae; Zhang et al., 2000 ), banana (Musa
acuminata, family Musaceae; Peumans et al., 2000b ), Japanese chestnut (Castanea crenata, family Fagaceae; Nomura et al.,
2000 ), Parkia platycephala (family Fabaceae; Mann et al.,
2001 ), and oilseed rape (Brassica napus, Brassicacea) plants
(Geshi and Brandt, 1998 ). At present, the exact relationships between
the two subfamilies of JRLs are still unclear because thus far no
detailed study was made of a Gal- and a Man-specific JRL from a single
species. Therefore, the fortunate presence of large quantities of a
Gal- and a Man-specific lectin in mulberry bark offered a unique
opportunity to corroborate the structural, functional, and evolutionary
relationships between the two distinct subfamilies of the JRLs.
This paper describes the isolation, characterization, molecular
cloning, and subcellular localization of two very abundant bark lectins
from the black mulberry tree. One of these lectins is a Gal-specific
JRL (called black mulberry tree agglutinin G or MornigaG), whereas the
other is a Man-specific homolog (called black mulberry tree agglutinin
M or MornigaM). Our results not only unambiguously demonstrate the
occurrence of JRLs in bark, but they also provide for the first time,
to our knowledge, evidence for the presence of an abundant cytoplasmic
VSP in bark.
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RESULTS |
The Bark of the Black Mulberry Tree Contains Large Quantities of a
Mixture of Two Different Lectins
Crude extracts from the bark of the black mulberry tree exhibited
a titer >500,000 in agglutination tests with trypsin-treated rabbit
erythrocytes, indicating that the black mulberry bark has an unusually
high lectin content. SDS-PAGE further demonstrated that the most
abundant bark proteins correspond to a set of polypeptides with an
Mr of approximately 16 kD (Fig.
1, lane 4). Because this Mr is reminiscent to that of jacalin, it
was checked whether black mulberry bark contains one or more vegetative
homolog(s) of the seed-specific Artocarpus lectins. Hapten
inhibition assays demonstrated that the agglutination activity of the
black mulberry bark was, unlike that of jacalin, not abolished by Gal.
To find out whether black mulberry tree bark contains a lectin with a
different specificity or possibly a mixture of two or more lectins with
a different specificity, the hapten inhibition assays were extended
with a series of simple sugars and equimolar mixtures of different
combinations of two simple sugars. No simple sugar caused a visible
effect on the agglutination activity of the crude extract, but a
mixture of 50 mM methyl
-D-galactopyranoside and 50 mM methyl
-D-mannopyranoside yielded a complete
inhibition, indicating that the bark contains a mixture of Man-specific
and Gal-specific lectins.

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Figure 1.
SDS-PAGE of crude extracts and purified lectins
from black mulberry tree and jack fruit. Samples were loaded as
follows: lane 1, crude extract from black mulberry tree seeds; lane 2, purified MornigaG; lane 3, crude extract from black mulberry tree
summer bark; lane 4, crude extract from black mulberry tree winter
bark; lane 5, MornigaG; lane 6, MornigaM; lane 7, KM+; lane 8, jacalin;
and lane 9, crude extract from jack fruit seeds. Extracts loaded in
lanes 3 and 4 were made from equal amounts of frozen bark tissue (and
hence reflect the in situ protein concentration and composition). All
samples were reduced with -mercaptoethanol. Molecular mass
reference proteins (lane R) were lysozyme (14 kD), soybean trypsin
inhibitor (20 kD), carbonic anhydrase (30 kD), ovalbumin (43 kD),
bovine serum albumin (67 kD), and phosphorylase b (94 kD).
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MornigaG and MornigaM could be completely resolved from the lectin
mixture by consecutive affinity chromatography on immobilized Gal and
Man, respectively. The total yield was approximately 8 mg MornigaG and
16 mg MornigaM g 1 dry bark meal (containing
approximately 30 mg total soluble protein g 1).
In accordance with this, MornigaG and MornigaM account for roughly
26.7% and 53.3%, respectively, of the soluble bark protein.
Molecular Structure of MornigaG and MornigaM
To determine the molecular structure of MornigaG and MornigaM the
affinity-purified lectins were analyzed by SDS-PAGE, mass spectrometry,
and gel filtration. MornigaG migrated as a single polypeptide of
approximately 16 kD upon SDS-PAGE, irrespective of whether the protein
was reduced with -mercaptoethanol (Fig. 1, lane 5). Mass
spectrometry revealed the presence of a single small polypeptide of
2,175 D and a mixture of seven polypeptides with a molecular mass
ranging between 15,776 and 16,032 D (15,776; 15,786; 15,811; 15,828;
15,976; 15,992; and 16,032 D, respectively). Mass
spectrometry/fragmentation of the small peptide yielded a sequence of
12 residues (IVVGTWGAQVTS), which shares high sequence identity with
the -chain of jacalin (Yang and Czapla, 1993 ). Sequencing of the
16-kD polypeptide by Edman degradation yielded 20 residues
(GVAFDDGAYTGIREINFEYN), reminiscent of the N terminus of the -chain
of jacalin (Yang and Czapla, 1993 ). Native MornigaG eluted with an
apparent Mr of approximately 60 kD from a
Superose 12 gel filtration column (using jacalin as a
Mr marker). These findings suggested that
native MornigaG is, like jacalin, a tetramer composed of four protomers
consisting of a short - and a long -chain. Sugar determination by
the phenol/H2SO4 acid
method indicated that MornigaG contains approximately 6% covalently
bound carbohydrate. Because this value corresponds to six
monosaccharide units per 16 kD polypeptide, it can be concluded that
MornigaG contains one N-glycan per protomer.
MornigaM migrated as a doublet of 15- to 16-kD polypeptides upon
SDS-PAGE, irrespective whether the protein was reduced with -mercaptoethanol (Fig. 1, lane 6). Mass spectrometry yielded two
values (16,320 and 16,898 D), indicating that the lectin is a mixture
of two slightly different forms. Native MornigaM eluted with an
apparent Mr of approximately 60 kD from a
Superose 12 gel filtration column (using jacalin as a
Mr marker). No covalently bound
carbohydrate could be detected in MornigaM preparations by the
phenol/H2SO4 acid method,
indicating that the lectin is not glycosylated. Sequencing of the
electroblotted 16-kD polypeptides of MornigaM yielded a very weak
signal, indicating that the bulk of the protein is N-terminally
blocked. Despite the weak signal, the sequence TQSTGTSQTIAVGLWGGPGGNAWD
could be determined. Because this sequence shares a high identity with
residues 1 through 19 of KM+ (Rosa et al., 1999 ), it seems likely that
the 16-kD polypeptides of MornigaM are homologs of the KM+ subunit in
Artocarpus seeds. Our analytical data indicate that MornigaM
is like KM+ (Misquith et al., 1994 ), a homotetramer composed of four
protomers each consisting of a single nonglycosylated 16-kD polypeptide.
Agglutination Activity and Carbohydrate-Binding Specificity of
MornigaG and MornigaM
MornigaG and MornigaM are powerful hemagglutinins. The specific
agglutination activity (defined as the minimal concentration required for a visible agglutination) of MornigaG was 2.5 and 3.3 ng
mL 1 with rabbit and human red blood cells,
respectively. For MornigaM, the specific agglutination activity was 5.4 and 43 ng mL 1 with rabbit and human
erythrocytes, respectively. MornigaG and MornigaM are one to two orders
of magnitude more potent hemagglutinins than all other JRLs except
jacalin and the Maclura pomifera agglutinin (MPA), which are
about as active as the Morus lectins (Fig.
2). MornigaG is (like jacalin and MPA)
almost equally active with rabbit and human erythrocytes, whereas
MornigaM has a clear preference for rabbit red blood cells (Fig. 2). A
similar (or even more pronounced) preference for rabbit over human
erythrocytes was observed for all Man-binding JRLs. However, it should
be emphasized that MornigaM is at least 25 times more active than any
other Man-binding JRL. This is important because the unusually high
specific agglutination activity may be indicative for a stronger
biological activity of MornigaM compared with the previously identified
homologs from other plant species.

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Figure 2.
Comparison of specific agglutination activity of
different Man-specific (left) and Gal-specific (right) JRLs. Results
are expressed as the agglutination titer of lectin solutions of 1 mg
mL 1. Agglutination activity was tested with
trypsin-treated rabbit (RRBC) and human group A (HRBC) erythrocytes.
All lectins were isolated by affinity chromatography on immobilized Man
or Gal, and were essentially pure.
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To determine the overall carbohydrate specificity of MornigaG and
MornigaM, the inhibitory effect of a series of simple sugars was tested
in hapten inhibition assays of the agglutination of rabbit
erythrocytes. The agglutination of rabbit erythrocytes by MornigaG was
readily inhibited by Gal, with the inhibitory concentration required to
cause 50% inhibition (IC50) being 25 mM, but not by Glc, Man, methyl
-D-mannopyranoside, or any other simple sugar (even when
used at a concentration as high as 200 mM). Similar assays
revealed that MornigaM was very efficiently inhibited by methyl
-D-mannopyranoside (IC50 = 1.5 mM) and to a lesser extent by Man
(IC50 = 12.5 mM) and Glc
(IC50 = 25 mM), but not by Gal or any
other simple sugar.
Molecular Cloning of Black Mulberry Tree Lectins
Screening of a cDNA library constructed with poly(A)-rich RNA from
bark using a synthetic oligonucleotide derived from the N-terminal
amino acid sequence EINFEYN of MornigaG yielded a high number of
positive clones. Sequence analysis of the cDNA clone LECMornigaG1
encoding MornigaG revealed that it contains an open reading frame of
669 bp encoding a 223-amino acid precursor with a putative initiation
codon at position 8 of the deduced amino acid sequence. Translation
starting with this Met residue yields a 216-amino acid polypeptide
(with a calculated molecular mass of 23,457 D) that shares a high
sequence similarity with the precursor of jacalin (Fig.
3). In a later stage, additional cDNA
clones encoding MornigaG were obtained after screening of the cDNA
library using LECMornigaG as a probe. Sequence analyses revealed minor differences among the deduced amino acid sequences of the different cDNA clones.

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Figure 3.
Deduced amino acid sequence of cDNA clones
encoding the black mulberry tree lectins. A, Alignment of precursor
sequences encoding MornigaG and jacalin. B, Alignment of the deduced
amino acid sequences encoding MornigaM and Heltuba, and the protein
sequence of KM+ (Rosa et al., 1999 ). C, Alignment of the deduced amino
acid sequences encoding MornigaG and MornigaM. Amino acids that are
conserved among the different sequences are boxed.
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The deduced amino acid sequence of LECMornigaG1 comprises a perfect
match with the amino acid sequence of the -chain
(I70-S81) and the N
terminus of the -chain
(G83-N102; Fig. 3).
Because the precursor of MornigaG shares a very high sequence identity
with that of jacalin (Yang and Czapla, 1993 ), one can reasonably assume
that both preproproteins are processed in a similar way. In accordance
with this, the primary translation product of LECMornigaG1 contains the
information for a signal peptide (residues 1-21), a propeptide
(residues 22-60), the 22-amino acid -chain (residues 60-81; 2,176 D), a short linker peptide SN (residues 82-83), and the 133-amino acid
-chain (residues 84-216; 14,685 D), respectively (Fig.
4). Though the precursors of MornigaG and
jacalin are very similar, there is apparently a difference for what
concerns the length and the site of the excision of the linker between
the - and -chains because a dipeptide (S82N83) is excised from
pro-MornigaG, whereas processing of projacalin involves the removal of
a tetrapeptide (T80SSN83).
As a result, the -chain of MornigaG is two amino acid residues longer than that of jacalin. However, it should be mentioned that according to the results of mass spectrometry analyses, a small part of
the -chain of jacalin also consists of a 22-residue polypeptide (Young et al., 1995 ).

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Figure 4.
Schematic representation of the differences in
biosynthesis, processing, and topogenesis of MornigaG and MornigaM. In
the top panel (MornigaG), SP, NPT, and L refer to signal peptide,
N-terminal propeptide, and linker between - and -chain,
respectively. In the bottom panel (MornigaM), M and P refer to the
N-terminal Met residue and the N-terminal propeptide, respectively.
PTP, Primary translation product; PTP-Met-1, Primary translation
product after removal of the N-terminal Met.
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The sequence of the mature -chain contains two putative
glycosylation sites, 21NET and
35NGT, respectively. Carbohydrate estimations
indicated that MornigaG contains approximately 6% covalently bound
sugars (corresponding to six to seven monosaccharide units per
-chain). Subtracting the calculated molecular mass of the naked
-chain (14,685 D) from that of the mature -chains (15,776;
15,786; 15,811; 15,828; 15,976; 15,992; and 16,032 D, respectively)
yields a difference of 1,091; 1,101; 1,126; 1,143; 1,291; 1,307; and
1,347 D, respectively. These differences in molecular mass correspond
to six to seven monosaccharide units, indicating that the -chain
contains a single N-glycan. On the analogy of jacalin and MPA (Young et
al., 1995 ), the occurrence of multiple forms the -chain of MornigaG
can be ascribed most probably to genetic and posttranslational microheterogeneity.
Screening of the same cDNA library using a synthetic oligonucleotide
derived from the N-terminal amino acid sequence WGGPGGNAWD of MornigaM
resulted in the cloning of MornigaM. Sequence analysis of the cDNA
clone LECMornigaM1 encoding MornigaM revealed an open reading frame of
531 bp encoding a 177-amino acid polypeptide with one putative
initiation codon at position 17 of the deduced amino acid sequence.
Translation starting with this Met residue yields a 161-amino acid
polypeptide with a calculated molecular mass of 16,984 D (Fig. 3).
Because residues T8-D31 of
this deduced acid sequence match almost perfectly the N-terminal sequence, there is no doubt that LECMornigaM encodes MornigaM. Further
analysis indicated that the deduced amino acid sequence of LECMornigaM
contains no signal peptide (von Heijne, 1986 ), which suggests that
MornigaM is like all other Man-binding JRLs synthesized on free
polysomes. The calculated molecular mass of the primary translation
product (16,984 D) differs from the values obtained by mass
spectrometry of the mature protein (16,320 and 16,898 D, respectively).
One of these polypeptides is 45 D larger than the primary translation
product after cleavage of the Met residue (16,853 D). Most probably,
this polypeptide corresponds to the primary translation product minus
the N-terminal Met but with an acetylated N-terminal Ala. It should be
mentioned here that the N-terminal Ala of the mature KM+ polypeptide
also is acetylated (Rosa et al., 1999 ). The second lectin polypeptide with a molecular mass of 16,320 corresponds to a protein starting with
the sequence TQSTGTSQ (16,322 D). N-terminal sequencing confirmed that
a small part of MornigaM starts with this sequence, which implies that
at least part of the primary translation product is posttranslationally
processed by the removal of an N-terminal heptapeptide. Therefore, it
can be concluded that the bulk of the primary translation product of
MornigaM is modified by the removal of the N-terminal Met followed by
an acetylation of the resulting N-terminal Ala. Only a small part of
the protein is proteolytically modified through the cleavage of a short
N-terminal peptide of seven residues (Fig. 4). Sequence comparisons
revealed that the deduced amino acid sequence of LECMornigaM shares
69% sequence similarity with the protein sequence of the Man-binding lectin of KM+ from jack fruit seeds (Rosa et al., 1999 ). The high sequence identity and structural similarity support the idea that MornigaM has to be considered a "vegetative" homolog of the
seed-specific KM+ from jack fruit. However, it should be mentioned that
mature KM+ lacks the first 11 N-terminal amino acid residues of
the N-acetylated MornigaM and the first five residues of the processed
MornigaM. Because KM+ has not been cloned, it is not clear
whether the different N terminus of the jack fruit and black mulberry
homologs is due to a different length of the primary translation
product or to a difference in posttranslational processing.
Molecular Modeling of MornigaG and MornigaM
MornigaG and MornigaM share a high sequence identity (74.5% and
60.7%, respectively) and similarity (86.3% and 74.0%, respectively) with jacalin. Hydrophobic cluster analysis (HCA) confirmed the close
structural similarity between the black mulberry tree lectins and
jacalin. All 12 strands of -sheet occurring in jacalin are well
conserved and are at similar positions in MornigaG and MornigaM (result
not shown). For the molecular modeling of the black mulberry tree
lectins, two different model lectins were used. Jacalin was used as a
model for MornigaG because both lectins closely resemble each other for
what concerns their specificity and molecular structure (i.e. the
presence of an - and a -chain). For MornigaM, Heltuba was used as
a model because this is the only Man-specific JRL for which the
structure has been resolved.
The three-dimensional model of the MornigaG monomer built from the
coordinates of jacalin comprises a heavy -chain of 133 residues
noncovalently associated with a light -chain of only 19 residues. In
contrast, the three-dimensional model of MornigaM built from the x-ray
coordinates of Heltuba consists of a single polypeptide chain. Like
jacalin and Heltuba, the MornigaG and MornigaM monomers exhibit a
typical -prism architecture, which consists of three bundles of
four-stranded -sheets oriented parallel to the axis of the prism
(Fig. 5). The -chain of MornigaG
contains 11 strands of -sheet forming two four-stranded bundles and
an incomplete three-stranded bundle of -sheet. An additional strand of -sheet present in the short -chain completes this third bundle of -sheet to form a regular -prism structure. The
carbohydrate-binding site of MornigaG comprises residues Gly-1,
Tyr-122, Trp-123, and Asp-125 of the -chain, and is located at the
top of the -prism. All four residues involved in the binding site of
MornigaG are exactly the same as in jacalin. In the structure of
MornigaM, all 12 strands of -sheet are located on a single
polypeptide. However, the organization of these 12 strands into three
four-stranded bundles is virtually the same as in MornigaG. The
carbohydrate-binding site of MornigaM consists of the residues Gly-16,
Phe-139, Val-140, and Asp-142, and is located at the top of the
-prism. All four residues involved in the binding site of MornigaM
are exactly the same as in Heltuba. It is interesting to note here that
two of the four residues of the binding sites of MornigaG and MornigaM are different, whereas all four residues are identical between MornigaG/jacalin and MornigaM/Heltuba.

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Figure 5.
Ribbon diagrams showing the -prism architecture
of the MornigaG (A, side view; B, top view) and MornigaM (C, side view;
D, top view) monomer. The location of the monosaccharide-binding
site at the top of the monomer is indicated by an asterisk. In
the structure of MornigaG, the noncovalently associated -chain and
-chain are labeled by the symbols and , respectively. The
contribution of the -chain of the MornigaG to the formation of the
third four-stranded bundle of -sheet (lower left) is shown in the
top view of the -prism (B). Figures were rendered with MOLSCRIPT and
RASTER3D.
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MornigaG and MornigaM Are Developmentally Regulated
A comparison of the protein composition of bark tissue collected
during summer and winter by SDS-PAGE clearly demonstrated that the
intensity of the lectin polypeptide bands strongly increases during
fall (Fig. 1, lanes 3 and 4). Semiquantitative agglutination assays
indicated that the total lectin activity is approximately 5-fold higher
in "winter bark" than in "summer bark." Furthermore, northern-blot analysis of RNA isolated from bark collected in summer
(mid July) and fall (mid October) showed that the lectin mRNAs are much
more abundant in fall than in summer (results not shown).
Immunocytochemical Localization of MornigaG and MornigaM in the
Cells of Bark Tissue
MornigaG and MornigaM are abundantly present in the cells of black
mulberry bark. Staining of the sections with anti-MornigaM antibodies
yielded a strong signal underneath the cell wall and in the nucleus
(which was identified by the concomitant DAPI staining; Fig.
6, A and B). This particular staining
pattern confirms that MornigaM is at least partly located in the
cytoplasm (as could be predicted on the basis of the deduced sequence
of the primary translation product of the corresponding gene). In
addition, it also appears that a considerable part of MornigaM is
located in the nucleus. In accordance with this, MornigaM should be
considered a cytoplasmic/nuclear protein. The labeling of MornigaG is
clearly distributed over the whole area of the cell, whereas the
nucleus is completely unlabeled (Fig. 6, C and D). This indicates that this lectin is, as could be expected on the basis of the presence of
similar vacuolar targeting sequences in the MornigaG precursor as in
jacalin, located within vacuoles.

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Figure 6.
Immunocytochemical localization of MornigaM and
MornigaG in bark of black mulberry tree. For immunocytochemical
analysis, semi-thin sections were probed with antibodies raised against
MornigaM (A) and MornigaG (C), respectively, followed by a goat
anti-rabbit immunoglobulin (Ig) G antibody conjugated with Alexa 488 as
described in "Materials and Methods." A and C, Treatment with
MornigaM and MornigaG antibody, respectively. B and D, Concomitant
4,6-diamidino-2-phenylindole (DAPI) staining of the sections shown in A
and C, respectively. The position of nuclei is marked by arrows.
Bar = 10 µm in all micrographs.
|
|
Seed-Specific Homologs of MornigaG and MornigaM
Crude extracts from black mulberry tree seeds also agglutinated
trypsin-treated erythrocytes. However, the titer of the seed extract
(400) was three orders of magnitude lower than that of crude bark
extracts, suggesting that the lectin content of the seed is
approximately 1,000-fold lower than that of the bark. This huge
difference in lectin content was confirmed by SDS-PAGE that
demonstrated that no major polypeptide bands are present in the pattern
of the seed extract at the position corresponding to that of the bark
lectins (Fig. 1, lane 1).
Hapten inhibition assays demonstrated that the agglutination activity
of the seed extract was, unlike that of the bark extract, almost
completely inhibited by Gal, indicating that the black mulberry tree
seeds contain exclusively or predominantly a Gal-specific lectin.
Affinity chromatography of the seed extract on Gal-Sepharose 4B yielded
a small quantity of a seed-specific Gal-specific black mulberry tree
agglutinin (MornigaGs). Careful examination of the unretained fraction
revealed that a weak agglutination activity was left over in the seed
extract after removal of MornigaGs. This residual lectin activity was
insensitive to Gal, but was completely inhibited by Man. Subsequent
affinity chromatography on Man-Sepharose 4B yielded a very small amount
of a seed-specific Man-specific black mulberry tree agglutinin (MornigaMs).
To corroborate the relationship of MornigaGs and MornigaMs to MornigaG
and MornigaM, respectively, the purified seed lectins were partially
characterized. MornigaGs and MornigaG behaved identically upon SDS-PAGE
and gel filtration (results not shown). Both lectins showed the same
specific agglutination activity and exhibited the same specificity
toward simple sugars. In addition, the N-terminal sequence of the 17-kD
polypeptide of MornigaGs was identical to that of the -chain of
MornigaG. Based on these results, it can be concluded that MornigaGs is
a virtually identical seed-specific homolog of MornigaG. The available
quantity of MornigaMs was too small to compare the seed lectin with
MornigaM by SDS-PAGE and gel filtration. However, both lectins showed
identical agglutination properties and exhibited the same sugar
specificity, suggesting that MornigaMs is a similar (or possibly
identical) seed-specific homolog of the bark-specific MornigaM.
 |
DISCUSSION |
The bark of the black mulberry tree accumulates large quantities
of two related, though different, JRLs. One of these lectins (MornigaG)
has the same molecular structure and carbohydrate-binding specificity
as jacalin and hence can be classified in the subfamily of Gal-specific
JRLs. The other lectin (MornigaM) shares its molecular structure and
overall specificity with KM+ and related lectins and thus clearly
belongs to the subfamily of Man-specific JRLs. Both black mulberry tree
bark lectins accumulate in very high concentrations and are
developmentally regulated like bark-specific VSPs. In this respect,
MornigaG and MornigaM resemble the bark lectins of the legume trees,
black locust (Nsimba-Lubaki and Peumans, 1986 ), Japanese pagoda tree
(Baba et al., 1991 ), yellow wood (Van Damme et al., 1995a ),
Maackia amurensis (Van Damme et al., 1997b ), and elderberry
(Nsimba-Lubaki and Peumans, 1986 ). This implies that beside legume
lectins and type-2 ribosome-inactivating proteins, members of the
family of the JRLs can be considered bark-specific VSPs. Though the
concept of lectins as bark storage proteins is not novel, the black
mulberry tree bark is a unique system for two reasons.
First, the total lectin content (approximately 80% of the total
protein content) is extremely high. Second, the bark of black mulberry
tree apparently accumulates a typical vacuolar (MornigaG) and a
cytoplasmic/nuclear (MornigaM) lectin. This is an important observation
because to the best of our knowledge, no (putative) cytoplasmic/nuclear
bark storage protein has been identified. Moreover, the fact that
MornigaM accounts for 53.3% of the total bark protein demonstrates for
the first time, to our knowledge, that a plant tissue accumulates the
bulk of its storage proteins as a cytoplasmic/nuclear protein. It is
interesting that the prominent nuclear location of MornigaM is
reminiscent to that of the recently discovered jasmonate-induced
chitin-binding tobacco (Nicotiana tabacum) lectin,
which occurs in the cytoplasm and nucleus of the leaf cells (Chen et
al., 2002 ). However, there is an important difference because MornigaM
does not, unlike in the tobacco lectin, contain a classical nuclear
localization signal in its sequence. MornigaM also differs from the
previously studied mannose-specific JRL from hedge bindweed, which is
exclusively located in the cytoplasm of the rhizome cells and is absent
from the nuclei (Peumans et al., 2000a ). This observation indicates
that the apparent partial nuclear location of MornigaM cannot be
extrapolated to all mannose-specific JRLS.
The simultaneous occurrence of a Gal-specific JRL and a Man-specific
JRL in a single tissue has already been documented for jack fruit
seeds. However, in this particular case, the Gal-specific lectin is a
major seed storage protein (accounting for approximately 70% of the
total seed protein), whereas the Man-specific lectin is only a minor
protein (Rosa et al., 1999 ). Estimates based on earlier reports and our
own experimental data indicate that jacalin is 50 to 100 times more
abundant than KM+.
Seeds of the black mulberry tree also contain a gJRL and a mJRL.
This simultaneous occurrence of closely related lectins in seeds and
bark is not unique for mulberry, but has also been encountered in most
tree species that express bark lectins. For example, seeds of
elderberry contain type-2 ribosome-inactivating proteins that closely
resemble their bark-specific homologs (Peumans et al., 1991 ). In a
similar manner, seeds of the legume trees black locust (Van Damme et
al., 1995b ), Japanese pagoda tree (Van Damme et al., 1997a ), and
Maackia amurensis (Yamamoto et al., 1994 ) contain lectins, which are closely related though not identical with the respective bark lectins. The observation that bark-specific lectins from three structurally and evolutionarily unrelated lectin families have seed-specific homologs in most species in which they are expressed
is important in view of the evolution of plant lectins and their genes.
Taking into consideration the high sequence similarity/identity between
seed and bark-specific homologs, one can reasonably assume that their
genes evolved from a common ancestor through the acquisition of seed-
and bark-specific promoters, respectively.
The fact that plants apparently used a similar mechanism for legume
lectins, type-2 ribosome-inactivating proteins, and JRLs was most
probably not by chance or coincidence but was driven by an evolutionary
pressure to express carbohydrate-binding domains in seeds and bark.
Though circumstantial, evidence for the possible involvement of such an
evolutionary pressure for the lectins follows the observation that thus
far, no bark-specific counterparts have been identified of the classic
seed-specific storage proteins like prolamins, 7S and 11S globulins,
and 2S albumins. The key question that remains is what kind of
evolutionary pressure may have driven plants to develop a genetic
system that directs the expression of lectins in seeds and bark. In
other words, why do plants accumulate seed and bark lectins? According
to the currently accepted ideas, the most abundant lectins,
irrespective whether they are located in seeds or vegetative tissues,
fulfill a double role. Under normal conditions (i.e. in the absence of
a challenge by a predating organisms), plant lectins just fulfill a
role as storage proteins. However, as soon as the plant is attacked by a herbivorous animal or a phytophagous invertebrate, the lectins act as
unspecific defense proteins (Chrispeels and Raikhel, 1991 ; Peumans and
Van Damme, 1995 ). The possible toxicity of MornigaG and MornigaM toward
higher animals and invertebrates has not yet been studied. However,
because MornigaG and MornigaM are capable of interacting with animal
glycoproteins, one can reasonably expect that they can exert harmful or
deleterious effects in the gastrointestinal tract of higher animals or
insects. It is worth noting in this context that jacalin, which is
virtually identical to MornigaG, possesses insecticidal properties
(Czapla and Lang, 1990 ). As has been suggested for other tree species
that express two or more bark lectins (e.g. elderberry and Japanese
pagoda tree) with a different carbohydrate-binding specificity, the
simultaneous accumulation of a Gal- and a Man-specific JRL in the bark
of black mulberry tree extends the spectrum of foreign target glycans, which eventually enables the plant to defend itself against a broader
range of pests.
Although the simultaneous occurrence of a Gal-specific (jacalin) and a
Man-specific JRL (KM+) in jack fruit seeds has been known for years (De
Miranda Santos et al., 1991 ), the exact relationship between both
lectins is still unknown because KM+ has not yet been cloned.
Therefore, the molecular cloning of MornigaG and MornigaM allowed us,
for the first time, to our knowledge, to make a detailed comparison of
the (deduced) amino acid sequences of a Gal-specific and a Man-specific
JRL from a single species. Beside confirming that MornigaG is virtually
identical to the previously described Gal-specific lectins from jack
fruit and Osage orange, our results unambiguously demonstrated that
MornigaM is a structural and functional homolog of the Man-specific
JRLs from hedge bindweed (Peumans et al., 1997 ), Jerusalem artichoke (Van Damme et al., 1999 ), and rice (Zhang et al., 2000 ).
The identification of MornigaG and MornigaM is also important because
it demonstrates that the bark of the black mulberry tree is a rich
source of two different lectins with interesting carbohydrate-binding
properties and biological activities. Although MornigaG closely
resembles jacalin with respect to its sequence and molecular structure,
there are definitely subtle differences between both lectins for what
concerns their respective specificity. Therefore, it can be expected
that, on the analogy of jacalin, MornigaG will be a useful tool and a
bioactive protein suitable for numerous applications in biological and
biomedical research. MornigaM is even more promising than MornigaG.
Several previously isolated Man-specific JRLs proved to be very useful
lectins because of their unique specificity toward Man and
oligomannosides. It is unfortunate that the potential use of most of
these lectins is limited because they are present in low concentrations
and are, for practical reasons, difficult to prepare in reasonable amounts. This drawback does certainly not apply to MornigaM because this lectin can easily be prepared in gram quantities. Moreover, because MornigaM is a much more potent agglutinin than any other Man-specific JRL, one can reasonably expect that this novel lectin will
be superior to all previously described Man-specific JRLs for various
applications as a tool and/or bioactive protein.
 |
MATERIALS AND METHODS |
Materials
All bark material was obtained from a single black mulberry
(Morus nigra) tree. Bark used for the isolation of RNA
destined for the construction of the cDNA library was stripped from
young shoots around mid-October, frozen on dry ice, and stored at
70°C until use. For the purification of the proteins, branches of
different age were cut from the tree in January (winter bark). The bark was stripped with a knife, lyophilized, and powdered in a coffee mill.
Samples of summer bark used for protein and RNA extraction were
collected in July. Seeds were isolated from ripe fruits collected from
the same tree.
Preparation of Crude Extract
Bark meal (50 g) was extracted in 500 mL of 0.2 M
NaCl containing 0.2% (w/v) ascorbic acid (adjusted to pH 7) by
continuous stirring overnight in the cold (2°C). The homogenate was
passed through a sieve and was centrifuged at 3,000g for
10 min. CaCl2 (1 g L 1) was added to the
supernatant and the pH was adjusted to 9.0 with 1 N NaOH.
After removal of the bulky precipitate by centrifugation (3,000g for 10 min), the supernatant was adjusted to pH
7.5 with 1 N HCl, and solid ammonium sulfate was added to a
final concentration of 1 M. The extract was kept overnight
in the cold room at 2°C and was centrifuged (8,000g
for 10 min). The resulting supernatant was filtered through filter
paper (3MM; Whatman, Beverly, MA) and was used for the isolation of the
Gal- and Man-specific bark lectins by successive affinity
chromatography on immobilized Gal and Man.
Isolation of the Gal-Specific Black Mulberry Tree Agglutinin
(MornigaG)
The cleared extract from the bark meal was loaded on a column
(2.5 × 10 cm; 50-mL bed volume) of Gal-Sepharose 4B equilibrated with 1 M ammonium sulfate. After loading the extract, the
column was washed with 1 M ammonium sulfate until the
A280 fell below 0.01 and the bound
(Gal-specific) lectin eluted with 200 mL of 20 mM Tris-HCl
(pH 10). The pH of the lectin solution was adjusted to 7.5 with 1 N acetic acid, solid NaCl was added to a final
concentration of 0.2 M, and the affinity chromatography on
Gal-Sepharose 4B was repeated using phosphate-buffered saline (PBS; 1.5 mM KH2PO4, 10 mM
Na2HPO4, 3 mM KCl, and 140 mM NaCl, pH 7.4) as a running buffer. The bound lectin was
eluted with a solution of 0.1 M Gal in PBS, dialyzed
against the appropriate buffer, and stored at 20°C until use.
After two consecutive rounds of affinity chromatography, the
MornigaG preparation was essentially devoid of the Man-binding MornigaM. The total yield of MornigaG was 630 A280 units (approximately 400 mg) 50 g 1 of bark meal.
Isolation of the Man-Specific Black Mulberry Tree Agglutinin
(MornigaM)
The flow-through and the wash fractions of the first affinity
chromatography on Gal-Sepharose 4B were pooled and loaded on a column
(2.5 × 10 cm; 50-mL bed volume) of Man-Sepharose 4B equilibrated with 1 M ammonium sulfate. After loading, the column was
washed with 1 M ammonium sulfate until the
A280 fell below 0.01 and the bound lectin
eluted with 200 mL of a solution of 20 mM Tris-HCl (pH 10).
The pH of the lectin solution was adjusted to 7.5 with 1 N
acetic acid and solid NaCl was added to a final concentration of 0.2 M. To remove possible traces of MornigaG, the lectin was first loaded on a column (1.6 × 5 cm; 10-mL bed volume) of
Gal-Sepharose 4B equilibrated with PBS. The flow-through and the first
25 mL of wash solution (PBS) were pooled and subjected to a second
affinity chromatography on the Man-Sepharose 4B using PBS as a running buffer. The bound lectin was eluted with a solution of 0.1 M Man in PBS, dialyzed against the appropriate buffer, and
stored at 20°C until use. After two consecutive rounds of affinity
chromatography (in combination with an intermediate affinity
chromatography on immobilized Gal), the MornigaM preparation was
essentially devoid of the Gal-binding MornigaG. The total yield of
MornigaM was 1,240 A280 units (approximately
800 mg) 50 g 1 of bark meal.
Isolation of Black Mulberry Tree Seed Lectins
Dry black mulberry seeds (5 g) were powdered with mortar and
pestle and extracted in 50 mL of 0.1 M Tris-HCl (pH 7.5)
containing 0.2 M NaCl. The homogenate was centrifuged at
9,000g for 15 min and the resulting supernatant was
filtered through filter paper (3MM; Whatman). The cleared extract was
applied on a column (1 × 5 cm; approximately 4-mL bed volume) of
Gal-Sepharose 4B equilibrated with PBS. After loading the extract, the
column was washed with the same buffer until the
A280 fell below 0.01. The bound lectin (MornigaGs) was eluted with 5 mL of 20 mM acetic acid,
lyophilized, and was redissolved in 1 mL of PBS.
The pass-through and first 10 mL of wash solution of the affinity
chromatography on Gal-Sepharose 4B were combined and loaded onto a
column (1 × 5 cm; approximately 4-mL bed volume) of Man-Sepharose 4B equilibrated with PBS. After loading the extract, the column was
washed with PBS until the A280 fell below
0.01 and the bound lectin (called MornigaMs) eluted with a solution of
20 mM acetic acid, lyophilized, and was redissolved in 1 mL
of PBS.
The total yield of MornigaGs and MornigaMs was 1.5 A280 units (approximately 1 mg) and 0.05 A280 units (approximately 30 µg), respectively, 5 g 1 of seed meal.
Hemagglutination Tests and Hapten Inhibition Assays
Agglutination assays were carried out in small glass tubes or in
96 U-welled microtiter plates in a final volume of 50 µL containing
40 µL of a 1% (v/v) suspension of red blood cells and 10 µL
of extracts or lectin solutions. To determine the specific agglutination activity, the lectin was serially diluted with 2-fold increments. Agglutination was assessed visually after 1 h at room temperature. Rabbit and human (blood group A) erythrocytes were treated
with trypsin as described previously (Van Damme et al., 1996 ).
The carbohydrate-binding specificity of the lectin was determined by
hapten inhibition of the agglutination of trypsinized rabbit
erythrocytes. To 10 µL of crude extract or a solution of purified
lectin (in PBS), 10-µL aliquots of solutions of sugars (0.5 M in PBS) or glycoproteins (5 mg mL 1 in PBS)
were added. After preincubation for 1 h at 25°C, 30 µL of a
1% (v/v) suspension of trypsinized rabbit erythrocytes was added and
the agglutination was evaluated after 1 h. To determine the
inhibitory potency of the most active monosaccharides and glycoproteins, the assays were repeated with serially diluted stock
solutions of sugars and glycoproteins. The concentration required for
50% inhibition of the agglutination of trypsin-treated rabbit
erythrocytes was determined visually.
Analytical Methods
Extracts and purified black mulberry tree lectins were analyzed
by SDS-PAGE using 12.5% to 25% (w/v) acrylamide gradient gels as
described by Laemmli (1970) . For N-terminal amino acid sequencing, purified proteins were separated by SDS-PAGE and were electroblotted on
a polyvinylidene difluoride membrane. Polypeptides were excised from
the blots and were sequenced on a protein sequencer (model 477A/120A or
Procise 491 cLC; Applied Biosystems, Foster City CA). Prior to mass
spectrometry, proteins were desalted on a C4-ZipTip (Millipore,
Bedford, MA). Proteins were dissolved in 50% (v/v) water and 50%
(v/v) acetonitrile containing 0.1% (v/v) acetic acid and they were
injected at 5 µL min 1 on an electrospray ion trap mass
spectrometer (Esquire-LC-MS; Bruker Daltonic, Bremen, Germany). About
300 spectra were averaged, resulting in an accuracy of ±0.01% for
proteins with a relative molecular mass of 10,000.
Total neutral sugar was determined by the
phenol/H2SO4 method (Dubois et al., 1956 ), with
D-Glc as a standard. Analytical gel filtration was
performed on a Pharmacia Superose 12 column (Amersham Biosciences AB,
Uppsala) using PBS containing 0.1 M Gal and 0.1 M Man (to avoid possible binding of the lectins to the
column) as a running buffer at a flow rate of 20 mL h 1.
Due to the aberrant elution behavior of lectins, the molecular mass of
native MornigaG and MornigaM was estimated using well-characterized members of the same lectin family, namely jacalin (60 kD) and Calsepa
(32 kD) as markers.
Preparation of Monospecific Antibodies and Western Blot
Polyclonal antibodies were raised against MornigaG and MornigaM
in male New Zealand white rabbits. The animals were injected with 1 mg
of purified protein dissolved in PBS and were emulsified in 1 mL of
Freund's complete adjuvant. Five booster injections with 1 mg of
purified protein in 1 mL of PBS were given at 10-d intervals. Ten days
after the final injection, blood was collected from an ear marginal
vein. After clotting, the crude serum was prepared by centrifugation
(3,000g for 5 min). Both antisera were purified by
affinity chromatography on the respective immobilized antigens as
previously described (Desmyter et al., 2001 ). Preliminary Western-blot
experiments showed that affinity-purified anti-MornigaG antibodies
strongly crossreacted with MornigaM and that affinity-purified anti-MornigaM antibodies strongly crossreacted with MornigaG. Due to
this strong crossreactivity, the affinity-purified antibody preparations were unsuitable for immunolocalization studies of the
black mulberry bark lectins. To remove the crossreacting antibodies, the affinity-purified anti-MornigaG antibody fraction was depleted of
MornigaM-binding antibodies by affinity chromatography on immobilized Morniga M. In a similar manner, the affinity-purified anti-MornigaM antibody fraction was depleted of MornigaG-binding antibodies by
affinity chromatography on immobilized MornigaG. Western-blot analysis
revealed that the final anti-MornigaG antibody fraction reacted
exclusively with MornigaG, whereas the final anti-MornigaM antibody
fraction reacted exclusively with MornigaM. Coupling of the antigens to
the column and purification of the antiserum were performed as
described previously for jacalin and Calsepa (Peumans et al.,
2000a ).
Immunocytochemistry
Small pieces of young black mulberry bark were fixed with 4%
(w/v) paraformaldehyde and 0.1% (v/v) Triton X-100 in PBS, embedded in
polyethylene glycol, and cut as described (Hause et al., 1996 ). Cross
sections (2 µm thick) were immunolabeled by incubation with purified
primary antibodies raised against MornigaM and MornigaG, respectively,
(diluted 1:250 [MornigaM] or 1:2,000 [MornigaG] in PBS containing
2% [w/v] acetylated bovine serum albumin and 1 mg mL 1
goat IgG) followed by an goat anti-rabbit IgG antibody conjugated with
Alexa488 (Molecular Probes, Eugene, OR). After immunolabeling, sections
were stained with 0.1 µg mL 1 DAPI for 15 min and were
mounted in citifluor/glycerol. Control experiments were performed by
omitting the primary antibody and they revealed no signal. The
fluorescence of immunolabeled MornigaM and MornigaG as well as of
DAPI-stained nuclei was visualized with a epifluorescence microscope
('84Axioskop; Zeiss, Jena, Germany) using the proper filter
combinations. Micrographs were taken by a CCD camera (Sony, Tokyo) and
were processed through the Photoshop program (Adobe Systems, Mountain
View, CA).
RNA Isolation, Construction, and Screening of cDNA
Library
Total cellular RNA was prepared from bark collected in autumn
and poly(A)-rich RNA enriched by chromatography on oligo-deoxythymidine cellulose. A cDNA library was constructed with poly(A)-rich RNA using
the Cap Finder cDNA Synthesis kit from Clontech Laboratories (Palo
Alto, CA). cDNA fragments were inserted into the EcoRI
site of pUC18 (Pharmacia, Uppsala). The library was propagated in
Escherichia coli XL1 Blue (Stratagene, La Jolla, CA).
Recombinant lectin clones were screened using a 32P
end-labeled degenerate oligonucleotide probes derived from the
N-terminal amino acid sequence of MornigaG (20-mer,
5'-TTRTAYTCRAARTTDATYTC-3') and MornigaM (29-mer,
5'-TGGGGNGGNCCNGGNGGNAAYGCNTGGGA-3'), respectively. In a later stage,
cDNA clones encoding black mulberry tree lectins were used as probes to
screen for more cDNA clones. Hybridizations were done overnight as
reported previously (Van Damme et al., 1996 ). Colonies that produced
positive signals were selected and rescreened at low density using the
same conditions. Plasmids were isolated from purified single colonies
on a miniprep scale using the alkaline lysis method as described by
Mierendorf and Pfeffer (1987) and they were sequenced by the dideoxy
method (Sanger et al., 1977 ). DNA sequences were analyzed using
programs from PC GENE (Biomed, Geneva) and GENEPRO (Riverside
Scientific, Seattle).
Northern Blot
RNA electrophoresis was performed according to Maniatis et al.
(1982) . Poly(A)-rich RNA (approximately 3 µg) was denatured in
glyoxal and dimethyl sulfoxide and was separated in a 1.2% (w/v)
agarose gel. After electrophoresis, the RNA was transferred to
Immobilon N membranes (Millipore) and the blot was hybridized using a
random primer-labeled cDNA insert. Hybridization was performed as
reported by Van Damme et al. (1996) . An RNA ladder (0.16-1.77 kb) was
used as a marker.
Molecular Modeling
The program SEQVU (The Garvan Institute of Medical Research,
Sydney) was used to compare the amino acid sequences of MornigaG and
MornigaM to that of other JRLs.
HCA (Gaboriaud et al., 1987 ; Lemesle-Varloot et al., 1990 ) was
performed to delineate the structurally conserved regions between the
amino acid sequences of MornigaG and jacalin (Sankaranarayanan et al.,
1996 ) on the one hand, and the sequences of MornigaM and Heltuba (Van
Damme et al., 1999 ) on the other. HCA plots were generated using the
program HCA-Plot2 (Doriane, Paris).
Molecular modeling of MornigaG and MornigaM was performed on a Silicon
Graphics O2 10000 workstation using the programs INSIGHTII, HOMOLOGY,
and DISCOVER3 (MSI, San Diego). The atomic coordinates of jacalin (RCSB
PDB code 1JAC; Sankaranarayanan et al., 1996 ) and Heltuba (RCSB PDB
code 1C3M; Bourne et al., 1999 ) were taken from the RCSB
Protein Data Bank and were used to build the three-dimensional models
of MornigaG and MornigaM, respectively. Steric conflicts resulting from
the replacement or the deletion of some residues in the modeled
proteins were corrected during the model building procedure using the
rotamer library (Ponder and Richards, 1987 ) and the search algorithm
implemented in the HOMOLOGY program (Mas et al., 1992 ) to maintain
proper side chain orientation. Energy minimization and relaxation of
the loop regions were carried out by several cycles of steepest descent
and conjugate gradient using DISCOVER3. The program TURBOFRODO
(Bio-Graphics, Marseille, France) was run on the O2 10000 workstation
to draw the Ramachandran plots and perform the superimposition of the
models. MOLSCRIPT (Kraulis, 1991 ), and RASTER3D (Merritt and Bacon,
1997 ) were used to draw the figures.
 |
FOOTNOTES |
Received March 18, 2002; returned for revision April 17, 2002; accepted June 18, 2002.
1
This work was supported in part by the Catholic
University of Leuven (grant no. OT/98/17), by Centre National de la
Recherche Scientifique (to A.B. and P.R.), and by the Fund for
Scientific Research-Flanders (Belgium, grant no. G.0113.01). P.P. is a
PostDoctoral Fellow of this fund.
2
Present address: Department of Molecular
Biotechnology, Ghent University, Coupure Links 653, B-9000
Ghent, Belgium.
3
Present address: Rega Institute, Laboratory of Molecular
Immunology, Katholieke Universiteit Leuven, Minderbroedersstraat 10, 3000 Leuven, Belgium.
*
Corresponding author; fax 32-9-2646219.
Article, publication date, and citation information can be found at
www.plantphysiol.org/cgi/doi/10.1104/pp.005892.
 |
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