First published online November 14, 2002; 10.1104/pp.007799
Plant Physiol, December 2002, Vol. 130, pp. 1815-1826
Forms of Zinc Accumulated in the Hyperaccumulator
Arabidopsis halleri1
Géraldine
Sarret,*
Pierre
Saumitou-Laprade,
Valérie
Bert,2
Olivier
Proux,
Jean-Louis
Hazemann,
Agnès
Traverse,
Matthew A.
Marcus, and
Alain
Manceau
Environmental Geochemistry Group, Laboratoire de Géophysique
Interne et Tectonophysique, University of Grenoble and Centre
National de la Recherche Scientifique (CNRS), Boite Postale 53, 38041 Grenoble cedex 9, France (G.S., A.M.); Laboratoire de
Génétique et Evolution des Populations
Végétales, Université de Lille1 and CNRS, Bât
SN2, 59655 Villeneuve d'Ascq cedex, France (P.S.-L., V.B.);
Laboratoire de Cristallographie, CNRS, 25 avenue des Martyrs, Boite
Postale 166, 38042 Grenoble cedex 9, France (O.P., J.-L.H.);
Laboratoire pour l'Utilisation du Rayonnement Electromagnétique,
Bât 209D, Centre Universitaire, Boite Postale 34, 91898 Orsay
cedex, France (A.T.); and Advanced Light Source (ALS), Berkeley Lab, MS
6-2100, Berkeley, California 94720 (M.A.M.)
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ABSTRACT |
The chemical forms of zinc (Zn) in the Zn-tolerant and
hyperaccumulator Arabidopsis halleri and in the
non-tolerant and nonaccumulator Arabidopsis
lyrata subsp. petraea were determined at
the molecular level by combining chemical analyses, extended x-ray
absorption spectroscopy (EXAFS), synchrotron-based x-ray
microfluorescence, and µEXAFS. Plants were grown in hydroponics with
various Zn concentrations, and A. halleri specimens
growing naturally in a contaminated site were also collected. Zn
speciation in A. halleri was independent of the origin
of the plants (contaminated or non-contaminated) and Zn exposure. In
aerial parts, Zn was predominantly octahedrally coordinated and
complexed to malate. A secondary organic species was identified in the
bases of the trichomes, which contained elevated Zn concentrations, and
in which Zn was tetrahedrally coordinated and complexed to carboxyl
and/or hydroxyl functional groups. This species was detected thanks to
the good resolution and sensitivity of synchrotron-based x-ray
microfluorescence and µEXAFS. In the roots of A.
halleri grown in hydroponics, Zn phosphate was the only species
detected, and is believed to result from chemical precipitation on the
root surface. In the roots of A. halleri grown on the
contaminated soil, Zn was distributed in Zn malate, Zn citrate, and Zn
phosphate. Zn phosphate was present in both the roots and aerial part
of A. lyrata subsp. petraea. This study
illustrates the complementarity of bulk and spatially resolved
techniques, allowing the identification of: (a) the predominant chemical forms of the metal, and (b) the minor forms present in particular cells, both types of information being essential for a
better understanding of the bioaccumulation processes.
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INTRODUCTION |
Metal tolerant plants have the
ability to survive and reproduce on soils containing high
concentrations of metals in forms that are toxic or inimical to other
plants (Macnair and Baker, 1994 ).
Metal-hyperaccumulating plants have the additional property of storing
large amounts of metals in their aerial parts, more than typically
10,000 µg g 1 dry weight for zinc (Zn;
Baker and Walker, 1990 ). This characteristic makes hyperaccumulators highly suitable for phytoremediation, a soft
method in which plants are used for the cleanup of metal-polluted soils
(Brooks, 1998 ; Baker et al.,
2000 ). The genetics and the biochemical processes involved in
metal uptake, transport, and storage by hyperaccumulating plants are
still poorly understood, although this basic information is fundamental
for the improvement of the technique (Van Der Lelie et al.,
2001 ). Zn is one of the most important metal contaminant in
industrialized countries (Nriagu and Pacyna, 1988 ), and
numerous studies have been conducted on the species Thalspi
caerulescens (Vazquez et al., 1992 ,
1994 ; Pollard and Baker, 1996 ;
Lasat et al., 1998 , 2000 ;
Küpper et al., 1999 ; Salt et al.,
1999 ; Frey et al., 2000 ;
Assunçaõ et al., 2001 ) and, to a lesser
extent, on Arabidopsis halleri (Macnair et al.,
1999 ; Bert et al., 2000 ; Küpper et
al., 2000 ; Zhao et al., 2000 ). This latter
species is of particular interest because it is one of the closest
relatives to Arabidopsis (Koch et al., 2001 ), whose
genome is entirely sequenced (Meinke et al., 1998 ; Kaul et al., 2000 ). This information, together with the
huge amount of literature available on Arabidopsis, should facilitate
our understanding of metal tolerance and hyperaccumulation in A. halleri.
A. halleri is a pseudo-metallophyte, which means that it is
found both in polluted and non-polluted areas. It is known as a Zn
hyperaccumulator, but recent studies showed that it can also hyperaccumulate cadmium (Dahmani-Muller et al., 2000 ;
Küpper et al., 2000 ; Bert et al.,
2002 ). By analyzing F2 progenies
produced by interspecific crosses between A. halleri and the
non-tolerant and non-hyperaccumulating Arabidopsis
lyrata subsp. petraea (A.l.), Macnair et al. (1999) demonstrated that Zn tolerance and
Zn hyperaccumulation are two genetically independent characters.
Moreover, by comparing Zn tolerance and Zn hyperaccumulation abilities
of several populations of A. halleri originating from
contaminated and uncontaminated areas, Bert et al.
(2000) showed that both characters are constitutive properties
of the species, but that populations from uncontaminated sites are
slightly less Zn tolerant but exhibit higher Zn accumulation rates than
populations from contaminated sites.
Recent studies by scanning electron microscopy and energy-dispersive
x-ray microanalysis documented the cellular distribution of Zn in the
tissues of A. halleri grown in hydroponics
(Küpper et al., 2000 ; Zhao et al.,
2000 ). In the leaves, Zn was mostly sequestered in the base of
the trichomes and in mesophyll cells. Trichomes are epidermal hairs
present at the surface of plant leaves, and their function can be as
diverse as the exudation of various molecules, the protection against
the wind and sunlight, or the storage of metals (Rodriguez et
al., 1983 ). The chemical form of Zn accumulated in the
trichomes and in mesophyll cells of A. halleri was not
determined. Another study on A. halleri grown in
Zn-containing hydroponics showed a correlation between the
concentration of Zn and the concentration of phosphorus (P) and citric
and malic acids in the roots (Zhao et al., 2000 ). The Zn-P correlation was attributed to Zn phosphate precipitates at the
root surface. No Zn correlation with P or organic acids was found in
the leaves.
In hydroponic studies, the nutrient solution used is generally devoid
of silicon because this element is not considered essential to plants
(Epstein, 1999 ). However, some Zn-containing
silicate aggregates were observed in the cytoplasm and in
pinocytotic vesicles of A. halleri leaves grown on polluted
soils, suggesting that Zn was transiently present as Zn silicate in the
cytoplasm, before being translocated and stored in the vacuoles in an
undetermined form (Neumann and zur-Nieden,
2001 ).
The aim of this study is to address several open questions concerning
the mechanisms of Zn tolerance and hyperaccumulation in A. halleri. First, what are the accumulation forms of Zn in the roots
and in the aerial parts of A. halleri, and are they specific
to this species or common to a non-tolerant and non-hyperaccumulating Arabidopsis species such as A.l.? Second, within A. halleri species, do Zn accumulation forms depend on the origin of
the plant (contaminated or non-contaminated)? Third, does the nature of
the growing medium (soil versus hydroponics) and Zn concentration in
the nutrient solution influence Zn speciation in the plant? To address
these questions, two populations of A. halleri,
one originating from a contaminated site (A.h.-C) and one
from a non-contaminated site (A.h.-NC), as well as a
non-tolerant and non-hyperaccumulating species, A.l.
(Macnair et al., 1999 ), were grown in hydroponics at
various Zn levels. In addition, natural specimens of A. halleri growing in a contaminated soil were collected. The
chemical form of Zn in the roots and in the aerial parts of the plants
was studied by Zn K-edge extended x-ray absorption fine structure
spectroscopy (EXAFS) on powder samples, and results were interpreted in
light of elemental and organic acids concentrations. The localization and speciation of Zn in the leaves of A. halleri was also
investigated at the micron scale by synchrotron-based x-ray
microfluorescence (µSXRF) and µEXAFS spectroscopy.
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RESULTS |
Elemental and Organic Acid Concentrations
Total concentrations of Zn, P, and organic acids in the
aerial parts and in the roots of the plants are presented in Table I. For the two populations of A. halleri grown in hydroponics, Zn concentrations increased with Zn
exposure. The transfer coefficient ([Zn]aerial
parts/[Zn]roots) is always close to
or less than 1, which is unexpected for a hyperaccumulating species.
Such a low transfer coefficient was already observed in hydroponic
experiments (Küpper et al., 2000 ), and is
attributed to the precipitation of Zn phosphates on the root surface.
Figure 1 shows that P and Zn
concentration are clearly correlated in the roots of hydroponic plants
(Fig. 1, group B), but not in the other samples (Fig. 1, group A,
including the aerial parts of all plants and the roots of A. halleri grown on a contaminated soil). Moreover, A. halleri grown on a contaminated soil presents a higher transfer
coefficient than hydroponic plants (1.5), which is consistent with a
chemical precipitation of Zn phosphate on hydroponic roots only. This
interpretation is also supported by EXAFS results (see below).
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Table I.
Zn, P, malate, citrate, and oxalate concentrations
in the roots (R) and in the aerial parts (AP) of the plants
Values are means of three samples ± SD.
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Figure 1.
Relationship between Zn and P concentrations in
the plant samples. Two groups of points can be defined: The first one
(group A) represents the aerial parts of all plants and the roots of
A. halleri from the contaminated soil. For these samples, Zn
and P are not correlated (R2, regression
coefficient = 0.07). The second group (group B) represents the
roots of all plants, except those of A. halleri from the
contaminated soil. A Zn-P correlation clearly exists for these samples
(R2 = 0.86).
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For a given Zn concentration in solution (250 or 100 µM
Zn), the population from A.h.-NC accumulates more Zn in its
aerial parts than that from A.h.-C, which confirms previous
observations made at lower Zn concentration (50 µM; Bert et al., 2000 ). The higher aerial Zn
accumulation in A.h.-NC was not accompanied by visible
toxicity signs, such as chlorosis or low growth. A.l. grown
in 10 µM Zn exhibits a very low transfer
coefficient (0.1), as expected for a non-hyperaccumulating species.
The concentrations of the three organic acids most often inferred to
bind metals (citrate, malate, and oxalate; Verkleij and Schat,
1989 ; Streit and Stumm, 1993 ; Brooks,
1998 ) were also measured, and compared with total Zn
concentrations (Table I). In the roots, for all but two samples, the
organic acid/Zn molar ratios were lower than 1 (Table I; Fig.
2). Moreover, the sum of the three organic acids/Zn ratio is lower than 1 for all but three samples. Thus,
these ligands are not concentrated enough to bind all Zn atoms present
in the roots. In the aerial parts, the malate to Zn molar ratio is
higher than 1 in all the samples, whereas citrate to Zn and oxalate to
Zn ratios are lower than 1. Thus, malate could bind all Zn atoms
present in the aerial parts by forming 1:1 complexes (the predominant
complex if we consider a solution containing equivalent concentrations
of Zn and malate at pH 5.5, which is the pH of the vacuoles), whereas
citrate and oxalate could not. However, the malate concentration is not
linearly correlated to Zn (Fig. 2). These results differ from those
obtained by Zhao et al. (2000) on A. halleri
plants grown in hydroponics, in which malate and citrate were
correlated to Zn in the roots, but not in the aerial parts.

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Figure 2.
Organic acid content as a function of Zn content
in the roots (A) and in the aerial parts (B) of the plants (values
given in Table I). The line y = x is shown
in each plot.
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Zn Speciation in the Bulk Samples
The Zn K-edge EXAFS spectra for all plant samples are shown in
Figure 3. The whole set of data was first
treated by principal component analysis (PCA; Ressler et al.,
2000 , and refs. therein). This statistical analysis allows the
determination of the number of independent components contained in a
set of spectra. The number of primary components corresponds to the
number of Zn species present in the set of spectra, provided no species
has a constant fractional amount ("background" species; Manceau et
al., 2003 ). Then, an operation called "target transform" evaluates
whether a reference spectrum is a likely principal component of the
system. Once all components have been identified, their proportion in the various samples is determined by least square fitting of the unknown spectra to the combination of reference spectra previously identified by PCA. This approach is particularly powerful for the
analysis of natural samples containing multiple forms of the same metal
because the number and nature of these forms cannot be assumed a priori
(Isaure et al., 2002 ). An important condition for the
PCA is that the number of spectra should be greater than the number of
unknown species, a condition amply satisfied here.

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Figure 3.
Zn K-edge EXAFS spectra for the plant samples
(A.h.-C; A.h.-NC; A.l.; R, roots; AP,
aerial parts) and for some Zn reference compounds. Solid lines are data
and dashed lines are linear combinations of Zn malate and Zn
phytate.
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The number of primary components was evaluated from three criteria: the
weight of each component, which is directly related to how much of the
signal it represents, the indicator of each component, which reaches a
minimum for the least significant component representing real signal
(Malinowski, 1991 ), and the residuals between
experimental and reconstructed spectra using one, two, three, or more
components. If the system contains two principal components, each
spectrum should be well fitted by two components, and adding a third
one should not significantly improve the quality of the fit.
In the present study, the weights of the first four components were, in
decreasing order, 107, 44, 8, and 6, with indicator values of 0.11, 0.04, 0.05, and 0.06, respectively. The spectra were correctly
reconstructed with two components, with the normalized sum-square
(NSS = [k3 (k)exp k3 (k)reconstr.]2/ [k3 (k)exp]2)
between 3.7 × 10 2 and 4.2 × 10 3, and the quality of the fits was not much
improved with three components (NSS between 2.5 × 10 2 and 3.5 × 10 3). Thus, it was concluded from this analysis
that two Zn species are significantly present in the set of samples.
Note that species representing less than 10% of total Zn are not
detected by this method.
The two statistically significant Zn species were subsequently
identified by target transformation using a large library of reference
spectra (aqueous Zn2+, Zn complexed to organic
acids and to amino acids, Zn sorbed on mineral surfaces, and Zn
minerals; Sarret et al., 1998a ; Manceau et al.,
2000 ). Several references gave satisfactory fits, including Zn
malate, Zn His, aqueous Zn2+, Zn citrate, and Zn
phytate. Other references, for instance Zn phosphate tetrahydrate or Zn
oxalate, gave unsatisfactory fits. Among the five compounds retained,
the most likely pair of primary components should allow the
reproduction of all the plant spectra by linear combinations of these
two spectra. Thus, all possible pairs were tested, and Zn malate + Zn
phytate was the only one satisfying this condition. Phytate, a
myo-inositol kis-hexaphosphate, contains six
phosphate groups, which lend the molecule a high affinity for cations
(Cosgrove, 1980 ). In Zn phytate, the metal is 4-fold
coordinated (R = 1.96 Å), with a second shell modeled by only one
P atom at 3.08 Å, which corresponds to a disordered Zn phosphate
environment. It is difficult to conclude on the presence of Zn
phytate or disordered Zn phosphate mineral in the plant samples, so in
the following text and in Table II, the
generic term "Zn phosphate" will be used for this species. In this
case study, the identification of the two species was facilitated by the fact that some samples were pure end members, i.e. contained 100%
Zn malate or 100% Zn phosphate (Table II).
The percentage of Zn malate and Zn phosphate in each sample was
estimated next by least square fitting the unknown spectra with linear
combinations of the two references (Table II; Figs. 3 and
4). The fits pointed to Zn malate as the
major species in the aerial parts of the two A. halleri
populations and in the roots of A. halleri from the
contaminated soil. These results are consistent with malate to Zn
ratios (higher than 1) except for the roots of A. halleri
grown on soil (Table II). In this latter sample, citrate is well
represented (138 µmol g 1). The simulation of
the EXAFS spectrum by a mixture of Zn malate (29% ± 10%), Zn citrate
(39% ± 10%), and Zn phytate (32% ± 10%) gave a satisfactory fit,
with an NSS of 5.3 × 10 2.
Because Zn citrate was among the compounds positively identified by the
target transformation, its presence in this sample is likely. The
occurrence of Zn citrate in the other samples was tested by including
Zn citrate as a third component of the simulations, but the proportions
determined were always below 5%, which is within the precision of the
method. The fact that the PCA pointed out two instead of three
principal components may be because of the fact that Zn citrate
is present in only one sample, in which it represents less than 50% of
total Zn.

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Figure 4.
Concentration of Zn species in the aerial parts
(A) and in the roots (B) of the plants calculated from EXAFS fitting
percentages and Zn concentrations, as explained in Table II.
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The leaves of A.h.-C exposed to 10 µM Zn contained Zn malate plus a minor
proportion (33% ± 10% of total Zn, i.e. 4 µmol
g 1) of Zn phosphate. The fact that this Zn
species was undetected at higher Zn concentration indicates that its
proportion decreases when Zn increases (Fig. 4A). Zn phosphate was
clearly the major Zn species in the roots of all plants grown in
hydroponics, and in the aerial parts of A.l.
Zn structural parameters determined by numerical fits confirmed
the results obtained by PCA and linear combinations (Table III; Fig. 5). In the aerial parts of
all A. halleri plants, Zn was
found to be octahedrally coordinated [d(Zn O) = 1.99 to 2.03 Å] and surrounded by a next nearest C shell at 2.80 to 2.87 Å,
in agreement with a Zn malate complex (Table III). In the roots of the
hydroponic plants, and in the aerial parts of A.l., the Zn-O
distance [d(Zn O) = 1.95 to 1.99 Å] is characteristic
of a tetrahedral coordination, and the next nearest shell consists of P
atoms at 3.06 to 3.16 Å as in phosphate compounds. Samples containing
several Zn species (roots of A.h.-C grown on soil and aerial
parts of A.h.-C grown in the 10 µM
solution) have Zn structural parameters intermediate between those of
the two (Zn malate and Zn phytate) or three (Zn malate, Zn citrate, and
Zn phytate) references.
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Table III.
Zn structural parameters in reference compounds
and plant samples
Structural parameters were obtained by simulating the first two
coordination shells of Zn. R, Interatomic distance (Å);
2, Debye-Waller disorder factor (Å2).
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Figure 5.
Radial distribution functions (RDFs; modulus and
imaginary part) for the roots and the aerial parts of A.h.-C
grown in solution containing 250 µM Zn. Solid
lines are data and dashed lines are numerical simulations. EXAFS
parameters are given in Table III.
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Zn Speciation in the Trichomes of A. halleri
High Zn concentrations were recently observed in the bases of the
trichomes in the leaves of A. halleri (Küpper
et al., 2000 ; Zhao et al., 2000 ). The
distribution and speciation of Zn in the leaves of A.h.-C
grown on the contaminated soil were investigated at the
micron scale using µSXRF and Zn K-edge µEXAFS spectroscopy. Elemental maps of Ca and various metals present in the leaves are
presented in Figure 6. Ca was almost
evenly distributed in the leaf, whereas transition metals were
concentrated in the bases of the trichomes. For instance, Zn signal was
about 10-fold greater in these spots than in the leaf itself (75,000 counts/s/I0 [incident intensity]
compared with 4,000-8,000 counts/s/I0).
Considering the thickness of the leaf and the trichome spots, it
corresponds to a Zn concentration at least 100-fold higher. The same
elemental distribution was observed in other leaves of different ages.
Zn K-edge µEXAFS spectra in different Zn "hot spots" were
recorded and found to be identical. Figure
7 compares the µEXAFS spectrum of a
trichome with the EXAFS spectra of the roots and aerial parts of
A.h.-C, together with a selection of Zn references. The
trichome spectrum is clearly different from all the others: Its
frequency matches that of the roots of A.h.-C grown in
hydroponics, but the two spectra clearly have a distinct shape. The
trichome spectrum was compared with a large number of Zn organic and
mineral references (see previous paragraph), but no good match
was obtained. The occurrence of mineral Zn in this highly
metal-concentrated zone was ruled out because EXAFS spectra of
inorganic compounds such as zincite or hydrozincite exhibit complex
shapes because of the presence of heavy atoms in the second or higher
coordination shells (Fig. 7). The comparison of the RDF for the
trichome and the bulk plant samples indicates that Zn is tetrahedrally
coordinated, as in the roots of the hydroponic plant (Fig.
8). The second shell peak of the trichome
is centered at R + R = 2.5 Å, compared
with 2.6 Å for the aerial parts (C shell) and 2.8 Å for the roots (P shell). This short distance is suggestive of a C shell (Sarret et al., 1998a ). This structural interpretation is strongly
supported by the relative position of the modulus and imaginary part of the Fourier transform, whose maxima are superimposed in the case of a
Zn-P pair, and opposite for a Zn-C pairs (see arrows in Fig. 8;
Sarret et al., 1998a ). Hence, the second coordination
shell of Zn in the trichome likely consists of C atoms.

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Figure 6.
µSXRF elemental maps of a leaf fragment
(incident beam energy, 9.7 KeV; beam size and pixel size, 5 × 5 µm; dwell time, 150 ms pixel 1). The number of
fluorescence yield counts were normalized by I0 and
the dwell time. Metals are concentrated in the bases of the
trichomes.
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Figure 7.
Comparison of the µEXAFS spectrum for the
trichome with the powder EXAFS spectra for A.h.-C and for a
selection of reference compounds.
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These data suggest that in the bases of the trichomes, Zn is
4-fold coordinated and complexed to carboxyl and/or hydroxyl groups
belonging to organic acid(s). This chemical form differs from the
average form (i.e. Zn malate) identified by powder EXAFS, which means
that it is quantitatively minor. Despite the high concentration of Zn
in the base of the trichomes, these cells account for a minor
proportion of the leaf biomass, so they do not represent the major sink
of Zn. The combination of µEXAFS and powder EXAFS shows that the
metal is distributed as Zn malate in the leaf itself (predominant
form), and as a tetrahedral Zn-organic acid(s) complex in the trichomes
(minor form).
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DISCUSSION |
A. halleri is supposed to accumulate Zn in the vacuolar
compartment of the leaves (Neumann and zur-Nieden,
2001 ), similar to T. caerulescens
(Vazquez et al., 1992 ; Küpper et al.,
1999 ; Frey et al., 2000 ). Organic acids, including
malate, citrate, and oxalate, are primarily located in the vacuoles
(Ryan and Walker-Simmons, 1983 ); thus, are often
inferred to chelate metals. In T. caerulescens, malate was
shown to be the most abundant organic acid in the shoots (164-248
µmol g 1 fresh weight), followed by citrate,
succinate, and oxalate (Tolra et al., 1996 ). However,
x-ray absorption near edge structure spectroscopy showed that
malate was not involved in Zn binding in this species, the chemical
forms of Zn being, in decreasing proportion, citrate, aqueous
Zn2+, His, and Zn bound to the cell wall
(Salt et al., 1999 ). In the present study, EXAFS and
chemical analyses showed that Zn is predominantly complexed to malate
in the leaves of the two A. halleri populations. A secondary
Zn organic species was identified in the trichomes, in which Zn is
tetrahedrally coordinated and complexed to carboxyl and/or hydroxyl
functional groups. The function of the trichomes in metal storage or
exudation is still unclear.
Although A.l. has a malate to Zn molar ratio much higher
than 1 in its aerial parts, this non-tolerant and non-hyperaccumulating species sequesters Zn as a phosphate species, similar to various crop
species (Van Steveninck et al., 1994 ;
Sarret et al., 2001 ). The fact that malate is not a
marker of tolerance and hyperaccumulation is also supported by the
results of Shen et al. (1997) , who showed that the
hyperaccumulator T. caerulescens and the non-tolerant and
non-hyperaccumulator Thlaspi ochroleucum had constitutively high concentrations of malate in shoots. Instead, the location of
malate (vacuolar or cytoplasmic) and the quantity of Zn transmembrane transporters (Lasat et al., 2000 ; Pence et al.,
2000 ; Assunçaõ et al., 2001 ) are
probably key factors conditioning Zn hyperaccumulation.
In the roots of hydroponic plants, Zn was speciated as inorganic or
organic Zn phosphate. Because phosphate precipitates have been observed
previously at the root surface of hydroponic plants (Küpper et al., 2000 ; Zhao et al.,
2000 ), the inorganic form is more likely. Although the nutrient
solutions were undersaturated with respect to Zn-phosphate solids,
chemical precipitation may have been induced by the root activity. This
phenomenon would account for the low measured values of the
root-to-leaf transfer coefficients (Table I). Zn phosphate was also
present in small proportion in the roots of the plant grown on soil.
Its location, either at the surface of the roots or inside the cells,
is unknown, but the high P content of the soil (3-4 g
kg 1 dry weight
P2O5) tends to favor the
first hypothesis.
These results were obtained on freeze-dried and ground plant materials
for bulk EXAFS experiments, and on freeze-dried whole leaves for
µEXAFS experiments. For bulk EXAFS, grinding is required to obtain
homogeneous samples at the scale of the x-ray beam (a few hundred
micrometers in our experiment). To avoid chemical reactions between
different cell compartments during this step, the plant material can be
frozen or freeze dried. This latter conditioning was preferred to avoid
a possible partial defrosting and mixing of the cell compartments
during grinding or sample transfer. However, it is difficult to
completely dismiss the possibility of artifacts induced by this
preparation. For instance, could Zn malate and Zn phosphate be the
products of reactions occurring during the dehydration between
Zn2+, malate, and phosphate ions? The high
affinity of Zn2+ for malate and phosphate
(complexation constant log K = 2.9 for Zn malate,
Smith and Martell, 1982 ; solubility constant log
Ks = 32 for Zn phosphate tetrahydrate,
MINTEQA2 database) is a point in favor of the preexistence of the two
species in the fresh material. Moreover, these reactions would imply
proton exchange, whose possible occurrence at low temperature ( 52°C
in the freeze dryer used in this work) is unknown to our knowledge.
In conclusion, the major, and some minor, chemical forms of Zn in the
aerial parts and in the roots of A. halleri and
A.l. have been elucidated at the molecular scale by the
combination of chemical analyses and EXAFS spectroscopy. However, the
role of the genes involved in Zn tolerance and hyperaccumulation on the
speciation of Zn is still unknown. In addition, the biochemical processes responsible for Zn absorption, transfer, and storage remain
to be clearly delineated.
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MATERIALS AND METHODS |
Plant Origins
Seeds of Arabidopsis halleri were collected on
single mother plants in 1999 at two different sites. Seeds of A.
halleri from the polluted site (A.h.-C) were
collected in a field contaminated by the atmospheric fallouts of a
nearby Zn smelter in Auby (North of France). A.h.-NC
seeds were collected in Tatransla Javorina, a conservation area of the
High Tatras in Slovakia. Arabidopsis lyrata subsp.
petraea (A.l.) originated from
Unho t, a non-contaminated woodland in the valley of Lodenice in
Central Bohemia (Czech Republic).
Plant Culture
Seeds were germinated on sand in a greenhouse, and 8 weeks after
germination, seedlings were transferred to 10-L polycarbonate vessels
(six plants per vessel) containing a growth medium. The medium
consisted of 0.5 mM Ca(NO3)2, 0.2 mM MgSO4, 0.5 mM KNO3, 0.1 mM K2HPO4, 0.2 µM
CuSO4, 2 µM MnCl2, 10 µM H3BO3, 0.1 µM
MoO3, 10 µM FeEDDHA, and 0.2 µM
ZnSO4. The vessels were kept in a controlled growth chamber
(temperature, 20°C day/15°C night; light, 16-h day/8-h night). The
pH of the solution was maintained at 5.0 ± 0.1 using MES acid
buffer (2 mM), which is known to be chemically inert toward
metals. After 3 weeks, the nutrient solutions received ZnSO4 at the following concentrations: 10, 100, or 250 µM for A.h.-C; 100 or 250 µM
for A.h.-NC (the plants grown on 10 µM
were accidentally lost); and 10 µM for
A.l. (one vessel containing six plants per Zn
concentration). The theoretical speciation of Zn in the nutrient
solutions was calculated using the MINTEQA2 program. Zn speciation was
almost constant at the three Zn concentrations, with free
Zn2+ as major species (84%-85%), and aqueous
ZnSO4 as minor species (15%-16%). The saturation indexes
for Zn minerals were always negative, so no Zn precipitates should have
formed. During the experiment, nutrient solutions were renewed every
8 d. The position under lights in the growth chamber was randomly
modified each 4 d. Plants were harvested after 5 weeks of Zn
treatment. In parallel to the hydroponic culture, six A.
halleri plants growing naturally in the polluted site of Auby
were sampled. After harvesting, plant samples were rinsed with
deionized water and divided into roots and aerial parts. For each
species and each culture condition, the roots and the aerial parts of
the six plants were pooled to have enough material for the EXAFS and
chemical analyses and freeze dried. To allow a rapid freezing, each
sample was placed in a large container, transferred into the freeze
dryer at room temperature, and the container was filled with liquid
nitrogen before starting the dehydration. The samples were then ground
using a mechanical agate mill. An aliquot was kept for EXAFS, and the
rest was divided into six aliquots, three for the analysis of Zn and P,
and three for the analysis of organic acids. Some freeze-dried leaves
of A. halleri from the contaminated site were kept for
µSXRF and µEXAFS analysis.
Chemical Analyses
For Zn and P analysis, plant powders were digested with
HNO3/HClO4 (80:20 [v/v]) and Zn and P
concentrations were determined using inductively coupled atomic
emission spectrometry. For the determination of malic, citric, and
oxalic acid concentrations, the plant powders were placed in a 0.1 N HCl solution and ultrasonicated for 1 h to extract
and dissociate the Zn-organic acids complexes. The suspension was then
filtered at 0.45 µm, and cations were extracted from the solution
using a cationic exchange resin (On Guard H, Dionex, Sunnyvale,
CA). The solution was then neutralized to pH 7 using a 1 N NaOH solution. Organic acids concentrations were measured
by ionic chromatography (Dionex DX500). All values are given as mean
concentrations over three samples ± SD.
X-Ray Absorption Spectroscopy
Zn malate standard was obtained by slow evaporation of a
solution containing 10 2 M
Zn(NO3)2 and 8 × 10 2
M Na malate at pH 5.5. Zn citrate was purchased from Alfa
(Berkshire, UK). Zn phytate was kindly provided by J. Cotter-Howells (University of Aberdeen, Scotland). Other Zn
standards were presented previously (Sarret et al.,
1998a , 1998b ; Manceau et al.,
2000 ; Isaure et al., 2002 ). Pressed pellets were
prepared from the aerial parts and roots powder. Zn K-edge EXAFS
spectra of Zn-rich samples were measured at room temperature on beam
line D42 at the Laboratoire du Rayonnement Electromagnétique
(Orsay, France) in transmission mode using ionization chambers, and on
beam line BM32 at the European Synchrotron Radiation Facility
(Grenoble, France) in fluorescence mode using a 30-element solid-state
Ge detector (St. Quentin Yvelines, France) for diluted samples
([Zn] < 5,000 mg kg 1). Data extraction was performed
according to standard methods. The PCA and the least square spectral
decomposition were performed with our own software, and EXAFS
structural parameters (coordination nos., interatomic distances, and
Debye Waller factors) were determined using WinXAS 2.0 (Ressler,
1997 ). For this determination,
k3-weighted (k) functions
were Fourier transformed over the 3.5- to 12-Å 1 range
using a Bessel window with a smoothing parameter of 4. Then, fits of
the first two shells were carried out using Zn-O, Zn-P, and Zn-C
theoretical scattering functions calculated with FEFF7 (Rehr et
al., 1991 ) from the structure of Zn malate dihydrate (Reed and Karipides, 1976 ) and hopeite (Whitaker,
1975 ). Fits were performed both in k and
R space to check for consistency.
Microprobe Analyses
µSXRF and Zn K-edge µEXAFS measurements on the leaves of
A.h.-C grown on the soil were performed on beam line
10.3.2 at the ALS (Berkeley, CA), operating at 1.9 GeV and 200 to 400 mA. Fragments of freeze-dried leaves were fixed on a kapton tape,
mounted on an x-y translation stage, and
studied in air at room temperature. The beam was focused using a pair
of elliptically bent mirrors in the Kirkpatrick-Baez configuration
(Kirkpatrick and Baez, 1948 ). The incident beam
intensity was measured using two copper paddles forming a miniature
ionization chamber, and the fluorescence yield was measured using a
seven-element Ge solid-state detector. For µSXRF, the spot size was
5 × 5 µm, and the fluorescence yield was normalized by
I0 and the dwell time. Four maps of different leaves
were recorded. For µEXAFS, the spot size was 15 × 5 µm. Three
µEXAFS scans were performed on a Zn-rich trichome from three different leaves. All spectra were identical.
 |
ACKNOWLEDGMENTS |
We would like to acknowledge the European Synchrotron Radiation
Facility (Grenoble, France), the Laboratoire du Rayonnement Electromagnétique (Orsay, France), and the ALS (Berkeley, CA) for
the provision of beam time. We are grateful to Vlastimil Mikolas for
help in finding population sites in Slovakia, to Marc Macnair for
providing seeds of A.l., to Nicolas Geoffroy for his
technical support, and to Jaco Vangronsveld for fruitful discussions.
 |
FOOTNOTES |
Received April 30, 2002; returned for revision May 26, 2002; accepted July 17, 2002.
1
This work was supported by the CNRS,
"Programme Environnement, Vie et Société" (grant no.
00N55) and by the Nord-Pas-de-Calais Region, "Programme de Recherches
Concertées."
2
Present address: Centre National de Recherche sur les
Sites et Sols Pollués (CNRSSP), 930 Bd. Lahure, Boite Postale
537, 59505 Douai cedex, France.
*
Corresponding author; e-mail gsarret{at}ujf-grenoble.fr; fax
33-4-76-82-81-01.
Article, publication date, and citation information can be found at
www.plantphysiol.org/cgi/doi/10.1104/pp.007799.
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