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Plant Physiol, March 2003, Vol. 131, pp. 872-877
UPDATE ON LEGUME UTILIZATION
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INTRODUCTION |
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Legumes, broadly defined by
their unusual flower structure, podded fruit, and the ability of 88%
of the species examined to date to form nodules with rhizobia
(de Faria et al., 1989
), are second only to the
Graminiae in their importance to humans. The 670 to 750 genera and
18,000 to 19,000 species of legumes (Polhill et al.,
1981
) include important grain, pasture, and agroforestry species. Cohen (1977
; cited by Bryan
[2000]) reported domestication of lentils (Lens
esculenta) at a site in Iran dating to 9,500 to 8,000 BP;
Roosevelt et al. (1996)
noted the use of Hymenaea as a
food source in Amazonian prehistory. Bean (Phaseolus
vulgaris) and soybean (Glycine max), staple crops in
the Americas and Asia, respectively, were each domesticated more than
3,000 years ago (Hymowitz and Singh, 1987
; Kaplan
and Lynch, 1999
). Use of legumes in pastures and for soil
improvement dates back to the Romans, with Varro (37 BC; cited by
Fred et al. [1932]) noting "Legumes should be
planted in light soils, not so much for their own crops as for the good
they do to subsequent crops." This paper briefly overviews the
legumes and their importance in different agricultural and natural environments.
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GRAIN AND PASTURE PRODUCTION |
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Grain and forage legumes are grown on some 180 million Ha, or 12%
to 15% of the Earth's arable surface (Table
I). They account for 27% of the world's
primary crop production, with grain legumes alone contributing 33% of
the dietary protein nitrogen (N) needs of humans (Vance et al.,
2000
). Under subsistence conditions, the percentage of legume
protein N in the diet can reach twice this figure. In rank order, bean,
pea (Pisum sativum), chickpea (Cicer arietinum),
broad bean (Vicia faba), pigeon pea (Cajanus cajan), cowpea (Vigna unguiculata), and lentil
constitute the primary dietary legumes (National Academy of
Science, 1994). Legumes (predominantly soybean and peanut
[Arachis hypogeae]) provide more than 35% of the world's
processed vegetable oil (Table II), and
soybean and peanut are also rich sources of dietary protein for the
chicken and pork industries. The potential of legume crops is evident
in the huge increase in soybean production in Brazil, with
national mean yields increased from 1,166 kg
ha
1 in 1968 to 1969 to 2,567 kg
ha
1 in 2001 to 2002 (M. Hungria, personal
communication). This followed selection for later maturity, aluminum
tolerance, and calcium-use efficiency (Spehar, 1995
). In
the same crop, the controversy over molecular engineering, with some
countries refusing to grow transgenic soybean illustrates the need for
balance in future breeding activities.
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Unfortunately, improvement in legume crop yields have not kept pace
with those of cereals. Jeuffroy and Ney (1997)
note that wheat (Triticum aestivum) yields in France increased 120 kg
ha
1 year
1 between 1981 and 1996; those for pea increased only 75 kg
ha
1 year
1 over the same
period. The situation is worse in the developing countries where
Oram and Agcaoili (1992)
note that pea yields are only
45%, and faba bean and chickpea are only 75%, of those achieved in
developed countries. In part, this difference is due to the unfavorable
environmental conditions under which many legume species are grown.
Legumes are often grown after corn or rice and are seeded toward the
end of the growing season. They may have short growing seasons and may
be subject to intermittent or terminal drought. Progressive soil
chemical and physical degradation and acid soil conditions may also
limit their productivity.
Drought problems for legumes are likely to worsen with the projected
rapid expansion of water-stressed areas of the world from 28 to 30 countries today to 50 countries encompassing 3 billion people by 2030 (Postel, 2000
). There is a crucial need to increase drought tolerance in legumes; increasing salinity tolerance is a
parallel requirement in many areas. The more drought-tolerant legumes,
such as cowpea, are deeply rooted and may have reduced leaf size with
thickened cuticles to reduce water loss. Less tolerant legumes such as
beans can be selected for early maturity, efficiency in the
partitioning of nutrients toward reproductive structures, and
phenotypic plasticity (Beaver et al., 2003
). Pinto
Villa, now grown over 90% of the pinto bean area in Mexico, has these characteristics.
Nutrient depletion of soil is a particular problem for small
landholders in developing countries, where much grain-legume production
occurs, and many farmers cannot afford to use fertilizers. Sanchez (2002)
suggests average annual nutrient
depletion rates across 37 African countries of 22 kg N
ha
1, 2.5 kg P ha
1, and
15 kg K ha
1. Soil acidity affects more than 1.5 billion ha worldwide, with acid soil constraints to legume production
likely to increase as the result of acid rain, long-term N
fertilization, and natural weathering (Graham and Vance,
2000
). H ion concentration per se, Al and Mn toxicity, and P,
Mo, or Ca deficiency all contribute to the problem (Graham,
1992
). Nodulation and N fixation and survival of rhizobia in
soil are particularly affected under low P, acid soil conditions and
will be considered in more detail later in this paper.
Diseases and pests are also major constraints to legume production,
especially in the tropics and subtropics. In common bean, for example,
important pathogens include several viruses, fungi-causing root rots,
anthracnose, angular leaf spot, bean rust, white mold and web blight,
and the bacteria responsible for common bacterial blight and halo
blight (Coyne et al., 2003
). In Minnesota alone, losses
due to root rot are estimated at $4 million annually. A number of these
pathogens are seed transmitted; others can be carried by insects.
Limiting crop losses requires an integrated approach that may include
certified seed programs, fallow periods to reduce vector populations,
plowing to bury infected plant tissue, biological control of root
disease, chemical application, and resistance breeding (Beaver
et al., 2003
; Coyne et al., 2003
). Molecular
markers have permitted rapid progress in disease resistance breeding in
beans (Kelly et al., 2003
), but many of the measures suggested above are beyond the resources of the subsistence farmer, which is another reason why legume yields in third-world countries are low.
Use of legumes in the human diet can also be problematic. Legume seeds
generally contain 20% to 30% protein and are Lys rich, complementing
the nutritional profiles of cereals and tubers in the diet
(Duranti and Gius, 1997
). However, legumes are limited in sulfur amino acids, contain antinutritional factors including lectins and flatulence factors, and are commonly hard to cook. Preference for particular grain types or seed color also affects marketability.
Forage legumes have been the foundation for dairy and meat production
for centuries (Russelle, 2001
). When properly managed, they are rich sources of protein, fiber, and energy. Even in intensive animal and milk production, where grain crops are major feed sources, forage legumes are required to maintain animal health (Wattiaux and Howard, 2001
). Meat and dairy production in developing
countries is almost solely dependent upon forage legumes and grasses.
Alfalfa (Medicago sativa) is the prevalent forage legume in
temperate climates (Russelle, 2001
), with more than 72 million Mg of alfalfa worth $7 billion produced annually in the U.S.
alone. Alfalfa is the third or fourth most valuable crop in the U.S.
(U.S. Department of Agriculture, National Agricultural Statistics
Service, http://www.nass.usda.gov:81/ipedb/hay.htm). Other important
temperate pasture species include clovers (Trifolium spp.),
trefoil (Lotus corniculatus), sweetclovers
(Melilotus spp.), and vetches (Vicia
spp.).
Inclusion of legumes is critical for sustainable meat and dairy
production on the infertile savannah soils of the tropics and
subtropics (Consultative Group on International Agricultural Research, http://www.cgiar.org/research/res_cattle.html).
Incorporation of improved legumes into these ecosystems has lagged due
to lack of information, seed costs, and poor infrastructure. Species
from the genera Aeschynomene, Arachis,
Centrosema, Desmodium, Macroptilium, and Stylosanthes offer promise for improved tropical pasture
systems (Thomas and Sumberg, 1995
; Giller,
2001
). Of these, Stylosanthes spp. with some 30 species distributed throughout the tropics (de Leeuw et al.,
1994
), has been most widely adopted, with
Stylosanthes guyanensis and Stylosanthes
hamata now grown as improved pasture in Australia, China, Latin
America, and West Africa.
Presently underutilized crop and pasture legumes could still emerge.
Ladizinsky and Smartt (2000)
address opportunities for improved adaptation via further domestication. More exotic examples include marama bean (Tylosema esculentum; Dakora et
al., 1999
), sword beans (Canavalia gladiata;
Ekanayake et al., 2000
), and Desmanthus
illinoensis among grain crops, and annual medics and Biserrula pelecinus among pasture species (Howieson
et al., 1995
, 2000
). Again, germplasm collection
and evaluation must continue to be a research emphasis.
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AGROFORESTRY |
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Sprent and Parsons (2000)
discuss the importance of
woody tree legumes in forestry. Important genera include
Acacia, Anadenathera, Calliandra,
Dalbergia, Erythrina, Gliricidia,
Melanoxylon, Parkea, Prosopis,
Pterocarpus, and Samanea. Values for the
percentage of plant N derived from fixation in such species listed by
Giller (2001)
range from 2% to 100% but need to be
treated with caution. J. Grossman (personal communication) suggests
that Inga oerstediana, widely used in southern Mexico as a
shade tree with coffee, may not even be capable of establishing an
effective symbiosis.
Food security issues, pressure on the land, and increasing soil
degradation (Franzluebbers et al., 1998
; Cassman,
1999
; Sanchez, 2002
) have led to increasing
research interest in tree-fallow and alley-cropping systems for
subsistence farmers in Africa and Asia. These are reviewed by
Buresh et al. (1997)
and by Buresh and Cooper
(1999)
. In tree fallows, Sesbania spp.,
Leucaena spp., Tephrosia spp.,
Crotalaria spp., Glyricidia spp., or
Cajanus spp. are interplanted into corn, and allowed to grow
as dry-season or longer-term fallows. The wood is harvested, and the
N-rich leaves, pods, and green stem material are hoed into the soil
just before the rainy season (Sanchez, 1999
).
Gathumbi et al. (2002)
reported aboveground biomass
production in a 6-month period of 8 to 15 Mg
ha
1, with total N accumulation of 100 to 178 kg
ha
1. Significant crop yield increases in the
season after tree fallow have been reported. Legume tree fodder with
high levels of crude protein and minerals, and in some cases, good
digestibility is readily accepted by livestock. Fertilization with rock
phosphate is often needed to improve the N benefits from tree fallows.
Alley cropping, with crops grown between hedgerows, and tree prunings
used as mulch or green manure can also provide significant N to the
interspersed crop. In Costa Rica, Phaseolus spp. beans grown
between Erythrina poeppigiana rows and supplied prunings from these trees yielded 15% to 50% more than beans grown in
monoculture (Henriksen et al., 2002
).
Sesbania sp. has been used similarly for alley cropping in
rice. Nevertheless, Giller (2001)
points to problems
with this system, including competition for moisture between trees and
crop plants, and declining yield benefits over time on infertile or
acid soils.
The increased role for N-fixing legumes under subsistence conditions has recently been recognized with the award of the 2002 World Food Prize to Dr. Pedro Sanchez, former director-general of the International Center for Research in Agroforestry.
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NATURAL ECOSYSTEMS |
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N is the primary nutrient limiting plant production in most
natural ecosystems (Seastedt and Knapp, 1993
;
Vitousek et al., 1997
). Legumes, through their symbiotic
abilities, can play an important role in colonizing disturbed
ecosystems, including those that are fire prone (Arianoutsou and
Thanos, 1996
). Rates of N2 fixation in
such environments are often low, but can still satisfy much of the
legume's N needs. B. Tlusty and P.H. Graham (personal communication)
found the percentage of plant N derived from fixation values for five
legumes in a seeded and inoculated long-grass prairie to range from
36% to almost 100%. Spehn et al. (2002)
examined plant
species and functional groupings among grassland communities in seven
countries in Europe. Two years after sowing, the presence of legumes
affected N pool size in five of the seven sites. Such a build-up in
soil N is probably not open ended, because Pearson and Vitousek
(2001)
noted a 10- to 20-fold decline in nodule mass and N
fixation between 6- and 20-year-old regenerating stands of Acacia
koa. A model developed by Vitousek and Field (1999)
associated reduction in N2 fixation with shade, P
limitation, and grazing.
Atmospheric CO2 enrichment and N deposition, each
a major ecological concern, are likely to have opposing effects in
natural ecosystems. Hardy and Havelka (1976)
showed
N2 fixation enhanced under
CO2 enrichment, and both legume biomass and
frequency were enhanced in free-air CO2
enrichment studies (Reich et al., 2001
; Teyssonneyre et al., 2002
). Total N in Lespedeza
capitata and Lupinus perrenis increased 58.3% and
32.0%, respectively at 560 µmol mol
1
CO2 (Reich et al., 2001
). In
contrast, C3 and C4 grasses
were responsive to N deposition, whereas legumes showing little
response. Influence of N on legume/grass balance in pastures is well
documented. In a model developed by Thornley et al.
(1995)
, the legume fraction in pasture declined from 18% to
1% as N supply was increased.
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INDUSTRIAL AND MEDICINAL USE OF LEGUMES |
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In addition to traditional food and forage uses, legumes can be
milled into flour, used to make bread, doughnuts, tortillas, chips,
spreads, and extruded snacks (R. Phillips personal communication) or
used in liquid form to produce milks, yogurt, and infant formula (Garcia et al., 1998
). Pop beans (Popenoe et al.,
1989
), licorice (Glycyrrhiza glabra;
Kindscher, 1992
), and soybean candy (Genta et
al., 2002
) provide novel uses for specific legumes.
Legumes have been used industrially to prepare biodegradable plastics
(Paetau et al., 1994
), oils, gums, dyes, and inks
(Morris, 1997
). Galactomannan gums derived from
Cyamopsis spp. and Sesbania spp. are used in
sizing textiles and paper, as a thickener, and in pill formulation.
Many legumes have been used in folk medicine (Duke,
1992
; Kindscher, 1992
). Isoflavones from
soybeans and other legumes have more recently been suggested both to
reduce the risks of cancer and to lower serum cholesterol
(Kennedy, 1995
; Molteni et al., 1995
).
Soybean and soyfood phytoestrogens have been suggested as possible
alternatives to hormone replacement therapy for postmenopausal women.
Several U.S. cities and states now require that fleet vehicles be powered in part by biodiesel fuel from soybean. Some states require that biodiesel be included at a fixed percentage in all diesel fuels (http://www.biodiesel.org).
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BIOLOGICAL N FIXATION |
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A hallmark trait of legumes is their ability to develop root nodules and to fix N2 in symbiosis with compatible rhizobia. This is often a critical factor in their suitability for the uses outlined above.
Formation of symbiotically effective root nodules involves signaling
between host and microsymbiont. Flavonoids and/or isoflavonoids released from the root of the legume host induce transcription of
nodulation genes in compatible rhizobia, leading to the formation of
lipochitooligosaccharide molecules that, in turn, signal the host plant
to begin nodule formation (Long, 1996
). Numerous changes occur in host and bacterial gene expression during infection, nodule
development, and function (Vance, 2002
), with
approximately 100 host legume and rhizobial genes involved.
Some 40 to 60 million metric tons (Mt) of N2 are
fixed by agriculturally important legumes annually, with another 3 to 5 million Mt fixed by legumes in natural ecosystems (Smil,
1999
). This is amazing efficiency given the miniscule
quantities of nitrogenase involved (Delwiche,
1970
).
Why is symbiotic N fixation in legumes so important? In addition to its
role as a source of protein N in the diet, N from legume fixation is
essentially "free" N for use by the host plant or by associated or
subsequent crops. Replacing it with fertilizer N would cost $7 to 10 billion annually, whereas even modest use of alfalfa in rotation with
corn could save farmers in the U.S. $200 to 300 million
(Peterson and Russelle, 1991
). Furthermore, fertilizer N
is frequently unavailable to subsistence farmers, leaving them
dependent on N2 fixation by legumes or other
N2-fixing organisms.
One of the driving forces behind agricultural sustainability is
effective management of N in the environment (Graham and Vance, 2000
). Application of fertilizer N increased approximately
10-fold to 90 million Mt between 1950 and 1995 (Frink et al.,
1999
) with significant energy consumption for N fertilizer
synthesis and application. Further increases in N needs for agriculture
are projected for the period to 2030 (Tilman, 1999
), and
these needs will contribute to environmental pollution. To the extent
that farming practices can make use of the more economically viable and
environmentally prudent N2 fixation
(Peoples et al., 1995
; Vance, 2001
),
agriculture and the environment will benefit. The ability of legumes to
sequester C has also been seen as a means to offset increases in
atmospheric CO2 levels while enhancing soil
quality and tilth. Resh et al. (2002)
found that soils
under N2-fixing trees sequestered 0.11 ± 0.07 kg m2 year
1 of soil
organic carbon, whereas there was no change under Eucalyptus spp. Carbon sequestration under Prosopis spp. has also been reported.
Giller (2001)
suggests that rates of
N2 fixation of 1 to 2 kg N
ha
1 growing season day
1
should be possible in all legumes. Rates reported by Unkovich and Pate (2000)
and van Kessel and Hartley
(2000)
are clearly less than this, with the latter authors
reporting a decline in average N2 fixation rate
for both soybean and beans over the period since 1985. Constraints to
N2 fixation include drought (Sinclair et
al., 1987
), soil acidity, N fertilization, and nutrient
limitations. Many cultivars also show only limited ability to fix
N2 in symbiosis.
Management of soil acidity for temperate and tropical regions has often
differed but increasingly depends on acid-tolerant legume cultivars and
rhizobia (Howieson et al., 2000
), with soil liming only
to a pH at which Al and Mn are no longer toxic. Acid soil management
was of critical importance in opening the Brasilian Cerrado to
agriculture, but it was serendipitous that the acid-tolerant Rhizobium tropici could replace other less tolerant bean
rhizobia (Hungria et al., 1997
). Identification of
additional acid-tolerant host and rhizobial germplasm and the
deployment of acid tolerance genes such as occur in R. tropici CIAT899 (Graham et al., 1982
) are
priority areas.
Maximum benefits from N2 fixation depend on soil
P availability (Kennedy and Cocking, 1997
), with 33% of
the world's arable land limited in P (Sanchez and Euhara,
1980
). Acid-weathered soils of the tropics and subtropics are
particularly prone to P deficiency. Even where P fertilization is
adequate, <15% of that P may be taken up by plants in the first year
(Holford, 1998
). Perhaps of greater concern, reserves of
rock phosphate could be depleted in only 60 to 90 years
(Abelson, 1999
).
Plants dependent on symbiotic N2 fixation have
ATP requirements for nodule development and function (Ribet and
Drevon, 1996
) and need additional P for signal transduction and
membrane biosynthesis. Phosphorus concentrations in the nodule are
often significantly higher than those in shoot or root tissue
(Israel, 1987
). Al-Niemi et al. (1997)
suggest that bacteroids can be P limited even when plants have received
otherwise adequate P levels. Given this requirement for symbiosis,
approaches leading to improved P acquisition and use in legumes
(rhizosphere acidification, acid phosphatase secretion, root
architectural changes at low P, enhanced P transport and use-efficiency, and functional differences in mycorrhizal symbioses) all need further study. White lupine (Lupinus albus) and
common bean are excellent model legumes for such studies. Each
undergoes change in root architecture and rhizosphere chemistry at low
P (Johnson et al., 1996
; Nielsen et al.,
1998
; Miller et al., 2001
), improving soil
exploration and phosphate scavenging. Transgenic alfalfa has proved
extremely useful in understanding the genetic and molecular basis of
low soil P, acid, and aluminum stress responses (Tesfaye et al.,
2001
). Results in this study highlight the need for more
effective transformation and regeneration protocols in the more
recalcitrant legumes, including bean and cowpea. Progress in the study
of nodulation and N2 fixation under drought or
salinity stress has been minimal, largely because the legume and the
process of nodulation are more susceptible to these constraints than is the microorganism.
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SYNOPSIS |
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Legumes play a critical role in natural ecosystems, agriculture,
and agroforestry, where their ability to fix N in symbiosis makes them
excellent colonizers of low-N environments, and economic and
environmentally friendly crop, pasture, and tree species. Legume yields
unfortunately continue to lag behind those of cereals. A research
orientation that better balances the needs of third-world or
sustainability-oriented agriculture with the breakthrough technologies of genomics and bioinformatics is needed. It requires stronger and more
adventurous breeding programs, better use of marker-assisted technologies, and emphasis on disease resistance, enhanced N fixation, and tolerance to edaphic soil constraints. It also requires extension of existing low-cost technologies, such as rhizobial inoculation, to
the small farmer. To paraphrase a comment by Catroux et al. (2001)
"we enter the era of biotechnology knowing more and
more about the growth of legumes at the gene level, but except for some
producers in developed countries, unable to effectively translate these
into major gains in productivity."
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FOOTNOTES |
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Received November 1, 2002; returned for revision November 29, 2002; accepted December 12, 2002.
* Corresponding author; e-mail pgraham{at}soils.umn.edu; fax 612-625-2208.
www.plantphysiol.org/cgi/doi/10.1104/pp.017004.
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J. Liu, S. S. Miller, M. Graham, B. Bucciarelli, C. M. Catalano, D. J. Sherrier, D. A. Samac, S. Ivashuta, M. Fedorova, P. Matsumoto, et al. Recruitment of Novel Calcium-Binding Proteins for Root Nodule Symbiosis in Medicago truncatula Plant Physiology, May 1, 2006; 141(1): 167 - 177. [Abstract] [Full Text] [PDF] |
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H. Zhu, H.-K. Choi, D. R. Cook, and R. C. Shoemaker Bridging Model and Crop Legumes through Comparative Genomics Plant Physiology, April 1, 2005; 137(4): 1189 - 1196. [Full Text] [PDF] |
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M. Ramirez, M. A. Graham, L. Blanco-Lopez, S. Silvente, A. Medrano-Soto, M. W. Blair, G. Hernandez, C. P. Vance, and M. Lara Sequencing and Analysis of Common Bean ESTs. Building a Foundation for Functional Genomics Plant Physiology, April 1, 2005; 137(4): 1211 - 1227. [Abstract] [Full Text] [PDF] |
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P. Gepts, W. D. Beavis, E. C. Brummer, R. C. Shoemaker, H. T. Stalker, N. F. Weeden, and N. D. Young Legumes as a Model Plant Family. Genomics for Food and Feed Report of the Cross-Legume Advances through Genomics Conference Plant Physiology, April 1, 2005; 137(4): 1228 - 1235. [Full Text] [PDF] |
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H.-K. Choi, J.-H. Mun, D.-J. Kim, H. Zhu, J.-M. Baek, J. Mudge, B. Roe, N. Ellis, J. Doyle, G. B. Kiss, et al. Estimating genome conservation between crop and model legume species PNAS, October 26, 2004; 101(43): 15289 - 15294. [Abstract] [Full Text] [PDF] |
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M. A. Graham, K. A.T. Silverstein, S. B. Cannon, and K. A. VandenBosch Computational Identification and Characterization of Novel Genes from Legumes Plant Physiology, July 1, 2004; 135(3): 1179 - 1197. [Abstract] [Full Text] [PDF] |
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P. Boominathan, R. Shukla, A. Kumar, D. Manna, D. Negi, P. K. Verma, and D. Chattopadhyay Long Term Transcript Accumulation during the Development of Dehydration Adaptation in Cicer arietinum Plant Physiology, July 1, 2004; 135(3): 1608 - 1620. [Abstract] [Full Text] [PDF] |
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