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Plant Physiol, April 2003, Vol. 131, pp. 1661-1670
Arabidopsis haiku Mutants Reveal New Controls of Seed
Size by Endosperm1
Damien
Garcia,
Virginie
Saingery,
Pierre
Chambrier,
Ulrike
Mayer,
Gerd
Jürgens, and
Frédéric
Berger*
European Molecular Biology Organization (EMBO) YIP team,
Unité Mixte de Recherche 5667, Ecole Normal Supérieure de
Lyon, Centre National de la Recherche Scientifique, Institut National
de la Recherche Agronomique, Université Lyon I, 46 Allée
d'Italie, F-69364 Lyon cedex 07, France (D.G., V.S., P.C., F.B.); and
Entwicklungsgenetik, Zentrum für Molebula biologie der Pflanzen,
Center of Plant Molecular Biology, Universität Tübingen,
Auf der Morgenstelle 3, D-72076 Tübingen, Germany (U.M., G.J.)
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ABSTRACT |
In flowering plants, maternal seed integument encloses the
embryo and the endosperm, which are both derived from double
fertilization. Although the development of these three components must
be coordinated, we have limited knowledge of mechanisms involved in
such coordination. The endosperm may play a central role in these
mechanisms as epigenetic modifications of endosperm development, via
imbalance of dosage between maternal and paternal genomes, affecting
both the embryo and the integument. To identify targets of such
epigenetic controls, we designed a genetic screen in Arabidopsis for
mutants that phenocopy the effects of dosage imbalance in the
endosperm. The two mutants haiku 1 and
haiku 2 produce seed of reduced size that resemble seed
with maternal excess in the maternal/paternal dosage. Homozygous haiku seed develop into plants indistinguishable from
wild type. Each mutation is sporophytic recessive, and double-mutant
analysis suggests that both mutations affect the same genetic pathway. The endosperm of haiku mutants shows a premature arrest
of increase in size that causes precocious cellularization of the
syncytial endosperm. Reduction of seed size in haiku
results from coordinated reduction of endosperm size, embryo
proliferation, and cell elongation of the maternally derived
integument. We present further evidence for a control of integument
development mediated by endosperm-derived signals.
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INTRODUCTION |
In flowering plants, the two female
gametes, the egg cell and the central cell, are fertilized by one of
the two male gametes delivered by the pollen tube. The zygotic product
of the fusion of one male gamete with the egg cell develops into the
embryo of the daughter plant. The fertilized central cell develops as the endosperm that nurtures embryo development. In most species, endosperm development is initiated by a proliferative syncytial phase
accompanied by cell growth that generates a large multinucleate cell
(Olsen, 2001 ; Berger, 2003 ). This
syncytium is partitioned into individual cells by a specific type of
cytokinesis called cellularization. In cereal species, the cellular
endosperm stores the reserves of the seed during a phase marked by
endoreduplication. Although the endosperm does not store the reserves
of the seed in Arabidopsis, it most probably controls the flux of
nutrients delivered by the vascular tissue of the mother to the embryo
and protects the embryo from physical and osmotic stresses.
Because the embryo is surrounded by the endosperm, which, in turn, is
enclosed within the ovule integument, these three structures must
coordinate their development to produce a mature seed of the
appropriate size. The endosperm plays a central role in the control of
seed size as indicated by a series of experiments in Arabidopsis and
maize (Zea mays), where the dosage balance between maternal and paternal genomes was perturbed (Lin, 1984 ;
Kermicle and Allemand, 1990 ; Scott et al.,
1998 ). In most flowering plants, the endosperm contains two
maternal copies and one paternal copy of the genome (2m/1p). In
Arabidopsis, increased paternal dosage in endosperm causes an increase
of seed size (Scott et al., 1998 ), whereas increased
maternal dosage has the opposite effect. Dosage imbalance has been
reported to affect primarily the timing of cellularization of the
endosperm and its degree of proliferation. In turn, the amount of
endosperm produced would affect proliferation of the embryo and the
size of the mature seed. These studies suggest that the endosperm is a
key player in the control of seed size through epigenetic controls.
Mutants that phenocopy the effects of m/p dosage imbalance might allow
identification of genes, the expression of which is affected by m/p
dosage imbalance in endosperm. Paternal excess in the endosperm is at
least partially phenocopied by mutations in the Polycomb Group genes of
the FIS class (Grossniklaus et al., 1998 ;
Luo et al., 1999 ; Ohad et al., 1999 ).
Until now, despite phenotypical similarities, no molecular link has
been made between imbalances in the m/p dosage and the FIS
genes. In contrast to paternal excess, no mutation at single loci that
phenocopy maternal excess in the m/p dosage has been isolated. However,
DNA methylation is likely involved because pollination of wild type
(WT) with transgenic pollen carrying a maintenance DNA
methyltransferase 1 antisense construct (MET1 a/s line;
Finnegan et al., 1996 ) causes precocious endosperm
cellularization and seed size reduction similar to maternal excess
(Adams et al., 2000 ; Luo et al., 2000 ).
We have screened for such a phenotype and report the isolation of mutants at two loci, haiku 1 and haiku 2. These
mutants are sporophytic recessive and cause premature arrest of
endosperm growth, which triggers precocious cellularization, restricts
cell proliferation in the embryo, and limits cell elongation of the
maternally derived seed integument. Our results provide new evidence
for feedback communication from the endosperm to the mother plant and
identify single loci potentially involved in parental dosage compensation.
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RESULTS |
Screens for Endosperm Mutants with Viable Seeds and Genetic
Characterization of the haiku Mutants
Plant M2 families were screened on a
cytological basis for abnormal endosperm development. Cleared seeds
were observed at stages ranging from late-heart to mid-torpedo embryo
stage, when the endosperm has passed the initial syncytial
proliferation stage and is cellularized (Fig.
1A). At these stages, seeds from
WT × MET1 a/s crosses show a remarkable reduction of
size of the endosperm and a slight delay in embryo development (Fig.
1C), and as reported previously, mature dried seeds are of reduced size
in comparison with WT (Adams et al., 2000 ; Luo et
al., 2000 ; Fig. 1, B and D). We isolated two mutant lines that
produce seeds with a phenotype similar to seeds from WT × MET1 a/s crosses (Fig. 1, E-H). The two lines were named
haiku 1 (iku1) and haiku 2 (iku2), reminiscent of the aphoristic literary form of
Japanese poetry. In both iku1/iku1 and
iku2/iku2, the size of the seed is reduced by 25% in length
and 14% in width (Table I). As a
consequence, iku seeds are more spherical than oblong, as
compared with the WT (Fig. 1, B, F, and H). Parallel to the reduction
in seed size, the mass of the seed is reduced by 32% in iku
mutants (Table I). In comparison with the WT seed, the growth of the
embryo and the size of the endosperm are reduced in iku
seeds (Fig. 1, A, E, and G). A variable small proportion of
iku seeds (less than 10%) of very reduced size collapse at
maturation and die. In most iku seeds, the embryo reaches
the bent-cotyledon stage, and seed maturation (seed browning and
drying) occurs as in WT (Fig. 1, F and H). These small seeds are viable
and germinate like WT. Seedlings homozygous for iku develop
into morphologically normal plants producing small seeds. The number of
seed produced per silique in selfed homozygous iku plants is
similar to WT. Except for seed size, we did not detect any
morphological difference between iku and WT plants.
Therefore, we conclude that iku1 and iku2 reduce seed volume but do not affect plant morphogenesis.

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Figure 1.
Morphology of seeds from a cross of WT × METI a/s compared with iku mutants. Nomarski
micrographs of cleared seeds at the embryo torpedo stage of WT (A),
crosses of WT × METI a/s (C), iku1 (E),
iku2 (G), and iku1/iku1;iku2/iku2 (I)
show reduced size of the seed in WT × METI a/s and
iku mutant. The endosperm is of reduced size, and the embryo
does not appear affected. Mature seeds from WT plants (B), crosses of
WT × METI a/s (D), and homozygous mutants
iku1 (F), iku2 (H), and
iku1;iku2 (J). Scale bars = 85 µm in A, C,
E, G, and I, and scale bars = 250 µm in B, D, F, H, and J.
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Selfed iku1 and iku2 heterozygous mutants produce
24.5% (n = 800; SE = 0.2) and
25.8% (n = 750; SE = 0.3) small
seeds, respectively. The progeny of backcrosses for each mutant
segregate 50% of plants heterozygous for the mutation
(n = 240 plants). This shows that iku1 and
iku2 are sporophytic recessive mutations and, thus, affect the development of the embryo, the endosperm, or both. Crosses to test
for genetic complementation between homozygous iku1 and iku2 plants produce 100% WT seeds (n = 700 seeds). Hence, iku1 and iku2 are mutated in
different loci. This is confirmed by mapping analyses that place
iku1 1.6 cM south of the marker Cop1a on chromosome 2 and
iku2 4.4 cM north of the marker ArLIM15 on chromosome 3. In
subsequent screens of gamma ray-mutagenized populations, two alleles of
iku1 and one allele of iku2 were isolated. All
iku alleles show identical phenotypes. Double-mutant plants
homozygous for iku1 and iku2 mutations produce
seed that by morphology and size are not significantly different from
those of single mutants (Fig. 1, I and J; Table I). Thus, both
haiku mutations are likely to be loss-of-function mutations
affecting two genes active in the same genetic pathway.
Development of the Seed in haiku Mutants
Because the earliest defect reported for seed development in
WT × MET1 a/s crosses is a precocious cellularization
of the endosperm (Adams et al., 2000 ), we characterized
in detail the development of the endosperm in seeds of selfed
heterozygous iku plants (Fig.
2, n = 120 seeds).
Identical results were obtained when selfed homozygous iku
plants were compared with WT (n = 200). Multiple
aspects of the development of the endosperm are affected in
iku mutants. In the WT endosperm, at the beginning of the
embryo triangular stage, the syncytial endosperm that has undergone a series of nuclear division is partitioned into individual cells, a
process referred to as cellularization (Boisnard-Lorig et al., 2001 ). This process is initiated in the micropylar endosperm
that surrounds the embryo at the anterior pole (Fig. 2A). In the
peripheral endosperm, which comprises the central large vacuole,
cellularization occurs after the eighth mitotic cycle (stage IX;
Sørensen et al., 2002 ; Fig. 2B). In contrast to the WT,
the iku endosperm undergoes cellularization in a single step
during stage VIII in the anterior and in the peripheral endosperm (Fig.
2, D and G). Additional endosperm cell layers are produced by
conventional cell division in iku as in the WT. However, the
number of such divisions is reduced by one-half in iku
mutant endosperm (Fig. 2, C and F). In less than 10% of the
iku seeds the endosperm is cellularized at endosperm stage
VII (not shown). In these seeds, the embryo reaches the globular embryo
stage, does not develop further, and dies at seed maturation.

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Figure 2.
Cytology of iku seeds. Confocal
sections of seeds of WT (A-C), iku1 (D-F), and
iku2 (G and H) at successive embryo stages: triangular (A,
D, and G), mid-heart (B, E, and H), and bent cotyledon (C and F). At
triangular embryo stage, the endosperm is completely cellularized in
iku1 and iku2 seed (D and G, arrowheads), in
contrast to the WT (A, arrowhead). Reduction of the size of the
posterior cyst in iku seeds is observed after the triangular
stage. Embryo morphology of WT and iku mutant is similar (B,
E, and H), although embryo growth is reduced after early torpedo stage
(C and F). Embryo cotyledon cells in WT (I) and in iku1 (J)
at late torpedo stage show similar size. Scale bars = 50 µm in A
through H, and scale bars = 7.5 µm in I and J.
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In contrast to endosperm development, embryo development shows no
obvious deviation from WT until the late-heart embryo stage in most
iku seeds, implying that the regular cell divisions
associated with the establishment of the apical-basal axis, the tissue
layers, and the bilateral symmetry are normal (Fig. 2, B, E, and H).
After early torpedo embryo stage, unlike WT embryos (Fig. 2C),
iku embryos do not undergo increased cell proliferation in
cotyledon primordia and in the hypocotyl (Fig. 2F). Cell size is
similar between iku and WT embryos (Fig. 2, I and J), which
indicates that reduction of the embryo size in iku results
from reduction in the total number of cells.
In conclusion, the iku mutations cause a precocious onset of
endosperm cellularization, reduce proliferation of the cellularized endosperm, and cause a reduction of the embryo proliferation after the
early torpedo stage.
Impact of Precocious Cellularization of Endosperm in
haiku Mutants on Seed Size
We hypothesized that, in iku seeds, precocious
endosperm cellularization contributed to the reduction of endosperm and
embryo proliferation. To test this hypothesis, the iku
mutants were crossed with mutants where endosperm cellularization does
not occur. If precocious cellularization was a major cause in the
reduction of seed size in iku, the double mutant without
cellularized endosperm should show restoration of a larger seed size.
Alternatively, the double-mutant seed would be of the size of
iku seed but with non-cellularized endosperm. In
iku/iku backgrounds, we introduced sporophytic recessive
mutations that cause defects of cellularization: kn
(knolle), spz (spätzle), and
hallimasch, respectively (Sørensen et al.,
2002 ). The mutant affects both cytokinesis in the embryo and
cellularization of the endosperm as a result of the loss of function of
the syntaxin KNOLLE, targeted to the cell plate (Fig. 3C; Lukowitz et al., 1996 ;
Lauber et al., 1997 ). Double-mutant plants
iku1/iku1;kn/+ produce one-quarter of
seeds bearing the typical knolle phenotype with enlarged
multinucleate cells in the embryo and a partially syncytial endosperm
(Fig. 3G). Irrespective of the presence or absence of the kn
phenotype, all the seeds produced by
iku1/iku1;kn/+ plants are of a
comparable size to seeds of the single mutant
iku1/iku1. The mutant spz is
characterized by the absence of cellularization in the endosperm, but
in contrast to knolle, it does not affect cytokinesis in the
embryo (Fig. 3B; Sørensen et al., 2002 ).
spz/spz seeds are viable and produce homozygous plants
indistinguishable from the WT. Similarly,
iku1/iku1;spz/spz double-mutant plants produce seeds of reduced size as does the single-mutant iku1/iku1, but with
non-cellularized endosperm (Fig. 3F). In kn and
spz, partial cellularization of the endosperm is observed in
a few seeds. To examine the effect of a complete loss of
cellularization, we used the mutant hallimasch that belongs to the pilz class, characterized by the complete absence of
microtubule in the embryo and in the endosperm (Mayer et al.,
1999 ). The pilz mutant seed is completely unable to
perform endosperm cellularization, and mitosis is severely prevented,
leading to the generation of large nuclei in the endosperm (Fig. 3D).
The pilz embryo development is reduced to a few
multinucleate cells. Double-mutant
iku1/iku1;hal/+ plants produce
one-quarter of seeds showing additive iku and hal phenotypes (Fig. 3H). Identical results are obtained in double mutants
with iku2 (Fig. 3, I-L). All combinations of
iku mutations with cellularization-defective mutants result
in additive phenotypes, without increasing seed size in comparison with
iku seeds. Hence, reduction of seed size in iku
mutants does not depend on endosperm cellularization.

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Figure 3.
Role of endosperm cellularization in the phenotype
of iku seeds. In WT seeds, the endosperm is entirely
cellularized at heart embryo stage (arrowhead in inset; A).
Cellularization does not occur in the mutants spz (B),
kn (C), and hal (D). Inserts show details of
endosperm (magnified 10 times). Absence of cellularization does alter
reduction of endosperm size in double-mutant combinations with
iku1 (E-H) or with iku2 (I-L). The severe
reduction of embryo development in hal does not have any
impact on the reduction of endosperm size by iku mutations
(H and L). Scale bars = 50 µm for all Nomarski
micrographs.
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Polarity of Endosperm in haiku Mutants
The posterior pole of the endosperm does not undergo
cellularization and contains three structures (Fig.
4A): (a) single nuclei surrounded by a
cytoplasmic unit that defines a nucleocytoplasmic domain (NCD;
Brown et al., 1999 ), (b) the nodules that result from
the fusion of NCDs, and (c) the posterior-most cyst, a multinucleate pool of cytoplasm that is formed by fusion of nodules (F. Berger, unpublished data). The cyst is located above the placentochalazal area
of the seed integument, where vascular elements terminate. In
iku seeds, the overall size of the posterior pole is reduced (Fig. 4D). The cyst of iku endosperm contains eight to 14 nuclei in comparison with 15 to 28 in the WT and is surrounded by zero to eight nodules and NCDs in comparison with 10 to 14 in the WT (n = 30 seeds for each genetic background). In a few
iku seeds, cellularization reaches the posterior pole (Fig.
2H). These observations suggest that iku mutations cause a
posterior displacement of the boundary between the peripheral endosperm
and the posterior pole. To test this hypothesis, we introduced the
polarity marker KS117 (Sørensen et al., 2001 ) into
iku1 and iku2. In the WT endosperm, the
expression of the marker KS117 is initially uniform (Fig. 4B) and
becomes restricted to the posterior pole (Fig. 4C). In iku1
and iku2 endosperm, the expression of the marker KS117
follows a dynamic pattern similar to the WT (Fig. 4, E and F). However, the size of the posterior zone of expression of KS117 was much reduced
in the iku endosperm, in agreement with the reduced size of
the iku cyst. The posterior endosperm is of potential
importance for transfer of maternal nutrients to the seed
(Schultz and Jensen, 1971 ; Otegui et al.,
2002 ). To test whether the reduction of the cyst in
iku seeds is responsible for the reduction of the size of
the endosperm we combined iku mutation to mutants of the
fis class that are characterized by over-proliferation of
posterior structures (Fig. 4H; Sørensen et al., 2001 ).
The mutations fis are gametophytic maternal, and
fis/+ plants generate 50% of seeds with enlarged,
non-cellularized endosperm (Chaudhury et al., 1997 ; Ohad et al., 1996 ; Grossniklaus et al.,
1998 ). The double mutant iku1/iku1;fis1/+ bears 50% of seeds
of reduced size similar to that of iku seeds with an
additive over-proliferation of the posterior endosperm (Fig. 4I).
Similar observations were made with iku2 (not shown). Hence,
over-proliferation of the posterior endosperm does not rescue the
reduction of seed size caused by the iku mutations. In
conclusion, the polarity of the endosperm does not appear to be
perturbed by the iku mutations, and the reduction of the
size of the posterior pole is probably a consequence and not a cause of
the overall reduction of the size of the iku seed.

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Figure 4.
Polarity in endosperm of iku mutants.
In WT seeds, the endosperm is characterized by the absence of
cellularization at the posterior pole, occupied by a syncytial cyst (c;
A), which is extremely reduced in iku mutants (D). The WT
expression of the green fluorescent protein (GFP) marker KS117
(green channel), initially uniform in the endosperm (B), becomes
restricted to the posterior pole (C). In iku1 background,
the posterior pole is reduced (D), but the restriction of expression of
KS117 still occurs (E, F). In fis1, the relative size of the
posterior pole increases (H, arrowheads) compared with WT (G). In
double-mutant seeds
iku1/iku1;fis1/fis1 (I),
the ectopic cysts typical of fis 1 phenotype are present
(arrowhead), but the size of seed remains as reduced as in
iku1/iku1 (I). G to I, Nomarski micrographs; B,
C, E, and F, projections of z series of confocal sections of GFP
fluorescence and red autofluorescence. Confocal sections of posterior
poles of WT and iku seed at heart embryo stage (A and D).
Scale bars = 20 µm for A and D; scale bars = 35 µm for B,
C, E, and F; scale bars = 50 µm for G to I.
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Reduction of Endosperm Size by iku Mutations
WT seed volume increases markedly between the dermatogen and the
mid-globular embryo stages after endosperm expansion (Fig. 5, A and B). During the same period, seed
shape changes, becoming more oblong. At the dermatogen embryo stage,
iku seeds cannot be distinguished from WT seeds (Fig. 5, A
and C). The first difference in seed size clearly detected in
iku seeds in comparison with WT seeds appears during
globular embryo stage (Fig. 5, B and D), during which endosperm growth
arrests (Fig. 5, A-D). The change of seed shape in WT does not take
place in iku seeds that remain roundish as at the dermatogen
embryo stage (Fig. 5, C and D). Identical defects are
observed in seeds from crosses between WT ovules and MET1
a/s pollen (Fig. 5, E and F), which further supports similarities
between iku phenotype and epigenetic changes that influence
endosperm development.

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Figure 5.
Compared development of iku seeds and
seeds from crosses of WT ovule × METI a/s pollen. In
WT seeds, transition from dermatogen (A) to mid-globular (B) embryo
stage coincides with increase of seed size. At dermatogen embryo stage,
WT seeds (A), iku1 seeds (C), and seeds from METI
a/s pollination of WT (E) have the same size. The transition from
dermatogen to mid-globular embryo stage occurs with a normal timing in
iku1- (D) and METI a/s-pollinated seeds (F), but
the increase of seed size observed in WT seed is reduced. Scale
bar = 50 µm for all Nomarski micrographs.
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Developmental Effects of the iku Mutations on the Seed
Integument
When homozygous iku plants are pollinated by WT pollen,
seed development occurs as in the WT. Hence, the iku
mutations do not have a maternal sporophytic effect on seed
development. As a consequence, the integuments that are of
maternal origin cannot be primarily affected by iku
mutations. However, the integuments are likely to be affected
indirectly to accommodate the overall changes in endosperm development
resulting from the sporophytic recessive effect of iku
mutations. The increase of the size of the integument takes place in
two steps: an initial phase of cell proliferation after fertilization,
followed by directional cell elongation (Western et al.,
2000 ). Cell elongation is more pronounced along the axis
defined by the apical-basal axis of the embryo. This leads to the
characteristic oblong morphology of the WT seed. In contrast, the
iku seeds remain nearly spherical (Fig. 1, F and H), and the
average cell size in the integument does not increase (Fig.
6). We could not detect differences
between WT seeds and iku seeds in the organization of the
placentochalazal integument that might play a role in the maternal
supply of nutrients to the endosperm (Fig. 4, A and D). In conclusion,
the iku mutations specifically affect cell elongation in the
seed integument. This ensures coordination of the development of the
maternal integument with the reduced increase of endosperm size.
Moreover, this suggests the existence of a signal from the endosperm
that would normally trigger cell elongation in the integument.

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Figure 6.
Effect of iku on the seed integument.
In contrast to WT (A and C), the cells in the seed integument of
iku1 (B) and iku2 (D) have not undergone
elongation (embryo heart stage). This is most dramatic in the inner
layers of the integument (i) that neighbor the endosperm (e). Scale
bars represent 20 µm.
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DISCUSSION |
The haiku Mutations Affect Endosperm Growth and Might
Identify Targets of Epigenetic Controls
Plants homozygous for iku produce seeds of reduced size
and do not show any other vegetative or reproductive phenotype. Other mutants with reduced seed size have been reported and can be readily distinguished from iku because they are affected in other
aspects of the plant life such as exs (Canales et
al., 2002 ), which causes male sterility; ctr1
(Christensen et al., 2002 ; F. Berger, personal observations), which prevents cell elongation and ethylene signal transduction (Kieber et al., 1993 ); and ats
(Léon-Kloosterziel et al., 1994 ), which causes
reduction of layers in seed integument. Hence, iku mutations
represent a new class of mutants specifically affected for seed size.
Interestingly, the locus haiku2 colocalizes with one
quantitative trait locus identified for seed size using natural
variation between seed size of the ecotypes Landsberg erecta
(Ler) and Cape Verde Islands (Alonso-Blanco et al.,
1999 ). Once the HAIKU2 gene identified, a search for
polymorphism and evaluation of its level of expression in
Ler compared with Cape Verde Islands ecotypes will be valuable.
Endosperm development is affected by iku mutation before any
defect is detected in the embryo. In the double mutant
hal/+;iku/iku, a nearly complete absence of
embryogenesis does not modify the effect of iku on the
reduction of seed size. We conclude that the reduction of seed size by
iku mutations is not directly mediated by the embryo but
rather by the endosperm.
The iku mutations affect many features of endosperm
development. The earliest phenotypic alteration in the iku
seed is a premature arrest of growth of the endosperm, although
proliferation of nuclei does not appear to be affected. This arrest
becomes visible during the embryo globular stage. The iku
endosperm undergoes a precocious complete cellularization at embryo
triangular stage. We have shown recently that cellularization is
coupled to the eighth mitotic wave in the peripheral endosperm
(Sørensen et al., 2002 ). We hypothesize that, akin to
cellularization of the syncytial Drosophila melanogaster embryo (Edgar and Lehner, 1996 ), cellularization of the
Arabidopsis endosperm depends on the achievement of a critical
threshold of the nucleocytoplasmic ratio. In iku endosperm,
the mitotic activity is not affected, whereas the size is reduced. This
would cause premature achievement of a threshold nucleocytoplasmic
ratio and results in the precocious onset of cellularization. In
conclusion, the iku mutations restrict initially the size of
the endosperm, which, in turn, affects multiple aspects of endosperm
development, such as cellularization, coordinated growth of the
differentiated domains, and proliferation of the cellular endosperm.
We report that pollination of a WT plant with hypomethylated pollen
causes arrest of endosperm growth during the globular embryo stage, and
we observed precocious endosperm cellularization. Thus, WT × MET1
a/s crosses completely phenocopy the effects of iku
mutations. A phenotype similar to iku is also produced by maternal excess in the endosperm (Scott et al., 1998 ).
We hypothesize that the effects of maternal excess and hypomethylation
of the paternal genome involve changes of the expression of many genes, some of which might be the IKU genes.
Regulation of Endosperm Size by IKU Might Control
Embryo Size via Trophic Interactions
Reduction of seed size in iku mutants is accompanied by
reduction of embryo size. This originates from a reduced cell
proliferation after the embryo heart stage and likely results from
defective development of the endosperm. This type of interaction
between the respective sizes of the endosperm and of the embryo has
been inferred from studies of other mutants in Arabidopsis, maize, and
rice (Oryza sativa). The Arabidopsis mutants
titan 3 (Liu and Meinke, 1998 ),
fis1/medea, fis2 (Chaudhury et
al., 1997 ; Sørensen et al., 2001 ),
demeter (Choi et al., 2002 ), and
spätzle (Sørensen et al., 2002 ),
primarily affected in endosperm development, produce viable embryos
with reduced growth that develop into normal-looking plants. In
maize and rice, the endosperm stores reserves of the seed. Hence,
endosperm developmental defects result in most cases in loss of seed
viability (Neufer and Sheridan, 1980 ). In rice, a series
of mutants show interdependence between the size of the embryo and the
endosperm without variation of seed size (Hong et al.,
1996 ). Although Arabidopsis endosperm does not store reserves, the reduced embryo growth as a consequence of reduced endosperm size
suggests that nutrients are delivered from the endosperm to the embryo.
In the WT, the endosperm acts as a sink for nutrient unloading from the
phloem, which is essential for its storage function either directly or
indirectly in the embryo cotyledons (Weber et al.,
1997 ). IKU genes may encode housekeeping proteins and iku mutant endosperm may be a poor sink, causing reduced
nutrient delivery and reserve storage. This may cause an initial
reduction of the endosperm growth, and later in development would
result in decreased proliferation in the iku embryo.
According to such a hypothesis, the double mutant
iku1/iku1;iku2/iku2 would be expected to show a
cumulative effect on endosperm growth and seed size, which was not observed.
Seed Size Restriction in iku Results from Impaired
Communication from the Endosperm to the Maternal Seed
Integument
Reduction of seed size in iku mutants affects the
integument that undergoes a precocious arrest of cell elongation.
Because the mutations iku do not show maternal sporophytic
effects, they cannot primarily affect the maternal seed integument. The
precocious sporophytic recessive effect of iku mutation on
endosperm is most likely the source of a signal toward the maternal
tissues. Thus, the iku mutants demonstrate in Arabidopsis a
feedback from the filial generation to the maternal generation that is
involved in the coordination of seed development.
Developmental interactions between the integument and the endosperm
have been demonstrated in cereals. Transfer of nutrients from the
mother plant to the endosperm that stores reserves involves the
specialized placentochalazal tissue of seed integument and the transfer
layer in the endosperm (Thompson et al., 2001 ). Mutants affected for the development of the placentochalazal tissue show defects in seed growth (Felker et al., 1985 ; Cheng et
al., 1996 ; Maitz et al., 2000 ). Most of these
mutants have sporophytic maternal effects on endosperm and embryo
development. In contrast, the maize mutant miniature1 is
sporophytic recessive and produces small seeds with a reduction of
endosperm size (Miller and Chourey, 1992 ; Cheng
et al., 1996 ), similar to iku mutants in
Arabidopsis. The reduction of size of the miniature1
endosperm results from a reduced proliferation of the cellular
endosperm (Vilhar et al., 2002 ). Because earlier steps
of endosperm development have not been studied in
miniature1, it is difficult to conclude whether similarities
with the iku phenotype extend to a reduction of growth of
the syncytial endosperm. Miniature 1 encodes a cell wall
invertase 2 (Carlson et al., 2000 ) that cleaves Suc in
hexoses. The activity of the Miniature 1 cell wall invertase 2 is
localized to the transfer layer of the endosperm that neighbors the
placentochalazal tissue of the integument (Cheng et al.,
1996 ). The abnormal development of the placentochalazal tissue
in miniature1 seeds substantiates evidence for
communications between the endosperm and the integument that would be
involved in the coordination of maternal nutrients supply to the seed.
The nature of such communications remains unknown.
In Arabidopsis, cytological organization of the posterior endosperm and
of the integument suggests similarities with the transfer zone of
cereals (Schultz and Jensen, 1971 ). Despite cytological similarities to cereals, the role of this zone in nutrients transport to the endosperm has not been demonstrated in Arabidopsis. However, unlike the miniature1 mutant, the placentochalazal region in
the maternal integument is not affected in iku, suggesting
that different functions are affected in both classes of
mutants. As proposed above, the iku endosperm might be
deficient in its normal function as a sink and would not provide enough
turgor to drive cell elongation in seed integument. An alternative
hypothesis to a mechanical signal could involve a molecular signal from
the endosperm that triggers onset of cell elongation. The
identification of the genes IKU might give some light on the
nature of signals involved in this communication.
 |
MATERIALS AND METHODS |
Plant Lines
Arabidopsis WT ecotype Ler was used to generate
populations of mutant lines. The WT ecotype Columbia was used for
genetic mapping. The mutant allele ML159 of the pilz
mutant hallimasch (Ler ecotype) was
isolated during the same screen as the haiku mutants
(Mayer et al., 1999 ). The mutant allele AP 6-16 (Ler ecotype) of KNOLLE has been
described previously (Lukowitz et al., 1996 ). The mutant
spätzle (allele DRU 42, WS ecotype) was isolated
during a screen of collections provided by Loic Lepiniec (Institut
National de la Recherche Agronomique, Versailles, France;
Sørensen et al., 2002 ). The mutants fis1
and fis2 (Ler ecotype) were provided by A. Chaudhury (Canberra, ACT, Australia; Chaudhury et al.,
1997 ). The marker line KS117 (C24 ecotype) originates from Jim
Haseloff's enhancer trap line collection (Haseloff,
1999 ; http://www.plantsci.cam.ac.uk/Haseloff).
Growth Conditions
After vernalization for 3 d at 4°C in the dark, seeds
were germinated on soil, and plants were cultured for 3 to 4 weeks in a
growth chamber under short days (8 h of light at 20°C and 16 h
of dark at 16°C, 60%-70% relative humidity). Flowering was induced by transfer to long days (20°C, 14 h of light/10 h of dark,
60%-70% relative humidity) where plants were cultured until seed
harvest. Plants were grown under long days in the greenhouse for seed
production and genetic mapping.
Mutagenesis and Isolation of the haiku Mutants
WT Ler seed were mutagenized with 0.3% (w/v)
ethyl methanesulfonate (EMS) for 8 h or 20,000 rads
x-rays, as previously described (Mayer et al., 1999 ).
M2 families of seed were harvested from secondary branches
after removal of the main shoot. For each M2 family, two
plants were selected, and developing seeds were collected at the
torpedo embryo stage from two siliques per plant. Seeds were cleared in
chloral hydrate solution and observed microscopically with Normarski
optics (Mayer et al., 1991 ). M2 families
(1,600 and 800, respectively) were inspected in the EMS and x-ray
populations. The percentage of embryo lethal mutations was 90% in EMS
M2 families and 10% in x-ray families. During this screen,
one to four alleles were found for the pilz mutants
pfifferling, hallimasch,
champignon, and porcino (Mayer et
al., 1999 ).
Seeds from 165 M3 plant lines with abnormal
endosperm development were observed for confirmation of the phenotype.
A subset of 20 lines was identified where embryo morphogenesis was not impaired, whereas endosperm development appeared abnormal. Three or
four backcrosses were done with these lines. Mature dried seeds with
phenotypic alterations were selected manually and planted on soil. In
six lines, such seeds germinated and produced plants homozygous for the
mutation. One line was characterized by a ratio of mutant seeds:WT
close to 1:1 and showed gametophytic maternal reduced transmission of
the mutation. Genetic mapping identified linkage with
FIS2, and the line ML 319 was identified as an allele of
the mutant fis2. Two other lines, UU3100 (EMS
mutagenesis) and ML 590 (x-ray mutagenesis), showed seeds of very
reduced size and were called haiku1 and
haiku2, respectively. FD 726 and FD 1476, two alleles of
haiku1, and GM 423, an allele of haiku2, were isolated in another screen of 2,000 gamma ray-mutagenized lines
(300 grays; 40% of embryo lethal mutation).
Genetic Mapping
After two backcrosses of the original mutant lines (ecotype
Ler), smaller seeds were selected from
heterozygous plants and germinated. These gave rise to homozygous
iku plants that were crossed with WT ecotype Columbia to
produce a mapping population. Smaller F2 seeds were
selected to produce a F2 mapping population enriched (90%)
in iku/iku plants. DNA of
iku/iku plants was extracted from single
leaves, and polymorphic markers were PCR amplified. The following
markers were used: chromosome 1, nga248; chromosome 2, GPA1, nga 1126, nga361, and Cop1a; chromosome 3, nga171, nga6, nga 126, nga 162, g4711a, GAPAB, athCHIB, and ArLIM15; and chromosome 4, AGa, nga1107,
and nga12.
Generation of Double Mutants
Because both mutants, iku1 and
iku2, shared nearly identical phenotypes, a series of
crosses was used to obtain double-homozygous mutants
iku1;iku2. Plants homozygous for each
mutation were crossed. Double-heterozygous F1
iku1/+;iku2/+ plants were crossed to
iku1/iku1, and small seeds
(iku1/iku1;iku2/+) from
the crosses were selected and germinated. After selfing, small seeds
were selectively germinated, and complementation tests between the
resulting F3 plants and homozygous iku2
mutants were performed to identify plants that were homozygous for both
iku1 and iku2.
Cytological Characterization of haiku Mutants
Individual siliques were opened with two shallow longitudinal
cuts on either side of the false septum. Siliques were stained with
Schiff's reagent (Sigma, St. Louis) and embedded in LR White (Sigma) according to Braselton et al. (1996) . All mutant
lines were initially propagated as heterozygotes and produced siliques that contained both WT seeds and seeds with the mutant phenotype. Seeds
that originated from individual siliques were isolated in each
preparation to be able to compare mutant with WT development at
corresponding stages. Confocal laser scanning microscopy was performed
on an LSM-510 microscope (Zeiss, Jena, Germany) using the 488-nm
excitation line of an argon laser and an emission filter long pass of
510 nm.
Fluorescence of the marker KS117 was observed directly with confocal
laser scanning microscopy on fresh seeds mounted in 0.3% (w/v)
agarose in 1% (w/v) Murashige and Skoog medium. For detection of GFP,
the selective setting used was (excitation = 488 nm and emission
510-550 nm). Red autofluorescence was detected using the nonspecific
setting (excitation = 543 nm and emission long-pass filter = 560 nm). Piles of 700- × 1,024-pixel sections were collected simultaneously for the green channel (GFP) and for the red channel (autofluorescence), and projections were realized using the Zeiss LSM
510 software.
Distribution of Materials
All novel materials described in this publication will be made
available in a timely manner for noncommercial research purposes upon
request to the corresponding author.
 |
ACKNOWLEDGMENTS |
We thank Prof. Christian Dumas for hosting our team in
his laboratory, Jean-Christophe Geminard for his help with measuring seed weight, and Jean Finnegan for the gift of the MET1
a/s lines.
 |
FOOTNOTES |
Received December 8, 2002; returned for revision January 3, 2003; accepted January 13, 2003.
1
This work was supported by the Centre National
de la Recherche Scientifique, Ecole Normale Supérieure de Lyon,
and Institut National de la Recherche Agronomique (with a specific PhD
fund to D.G.), by the Action Concertic Initiative Jeune (French
Ministry of Research; to F.B.), by the Action Concertic Incitative
Développement et Physiologic (to F.B.), by EMBO (short-term
fellowship to F.B.), by the EMBO Young Investigator Program (to F.B.),
and by the Deutsche Forschungsgemeinshaft (Leibniz award to
G.J.).
*
Corresponding author; e-mail frederic.berger{at}ens-lyon.fr;
fax 33-472728600.
Article, publication date, and citation information can be found at
www.plantphysiol.org/cgi/doi/10.1104/pp.102.018762.
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