First published online March 6, 2003; 10.1104/pp.102.012294
Plant Physiol, April 2003, Vol. 131, pp. 1727-1736
Natural Abundance Carbon Isotope Composition of Isoprene Reflects
Incomplete Coupling between Isoprene Synthesis and Photosynthetic
Carbon Flow
Hagit P.
Affek and
Dan
Yakir*
Department of Environmental Sciences and Energy Research, Weizmann
Institute of Science, Rehovot 76100, Israel
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ABSTRACT |
Isoprene emission from leaves is dynamically coupled to
photosynthesis through the use of primary and recent photosynthate in
the chloroplast. However, natural abundance carbon isotope composition
( 13C) measurements in myrtle (Myrtus
communis), buckthorn (Rhamnus alaternus), and
velvet bean (Mucuna pruriens) showed that only 72% to
91% of the variations in the 13C values of fixed carbon
were reflected in the 13C values of concurrently emitted
isoprene. The results indicated that 9% to 28% carbon was contributed
from alternative, slow turnover, carbon source(s). This contribution
increased when photosynthesis was inhibited by CO2-free
air. The observed variations in the 13C of isoprene
under ambient and CO2-free air were consistent with contributions to isoprene synthesis in the chloroplast from pyruvate associated with cytosolic Glc metabolism. Irrespective of alternative carbon source(s), isoprene was depleted in 13C relative to
mean photosynthetically fixed carbon by 4 to 11 . Variable
13C discrimination, its increase by partially inhibiting
isoprene synthesis with fosmidomicin, and the associated accumulation
of pyruvate suggested that the main isotopic discrimination step was
the deoxyxylulose-5-phosphate synthase reaction.
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INTRODUCTION |
2-Methyl-1,3-butadiene (isoprene) is
emitted from leaves of various plant species (Kesselmeier and
Staudt, 1999 ) and influences the trace-gas composition of the
troposphere by reacting with OH radicals and NOx
to generate tropospheric ozone (Trainer et al., 1987 ;
Chameides et al., 1988 ).
It has been demonstrated that isoprene is produced in the chloroplasts
from primary photosynthetic products via the
2-methylerythritol-4-phosphate (MEP) pathway (Zeidler et al.,
1997 ; Lichtenthaler, 1999 ). Fast labeling by
99% (v/v) 13CO2
indicated direct coupling between isoprene and photosynthesis (Sharkey et al., 1991a ), although uncertainty remains
concerning the potential contribution of cytosolic substrates to
chloroplastic isoprene production, such as isopentenyl pyrophosphate
(IPP) produced via the mevalonic acid pathway (Lichtenthaler et
al., 1997a ). Process-based isoprene emission models use
photosynthesis as a starting point (Niinemets et al.,
1999 ; Zimmer et al., 2000 ) assuming direct
coupling between the two processes. However, there are indications for
incomplete coupling in some cases, such as emission of isoprene in the
absence of net assimilation in the dark (Shao et al.,
2001 ) or under CO2-free air
(Monson and Fall, 1989 ; Loreto and Delfine,
2000 ; Affek and Yakir, 2002 ), that requires
isoprene synthesis using alternative carbon source(s). Isoprene
protection, such as against oxidative damage (Affek and Yakir,
2002 ), may depend on such decoupling to maintain isoprene
production when photosynthesis is at least partially inhibited.
Isotopic discrimination against 13C ( , where
= Rsubstrat/Rproduct 1, and R = 13C/12C) occurs during
diffusion of CO2 into leaves (4.4 ) and during CO2 fixation by Rubisco (29 ; Roeske and
O'Leary, 1984 ; Guy et al., 1993 ). The combined,
scaled effects of diffusion and carboxylation lead to
photosynthetically fixed carbon and organic matter depleted in
13C with respect to atmospheric
CO2. Further carbon isotope discrimination occurs
during lipid synthesis due to an isotopic effect that may be associated
with decarboxylation in the production of acetyl CoA from pyruvate
(DeNiro and Epstein, 1977 ; Melzer and Schmidt, 1987 ) and/or due to site-specific isotopic heterogeneity in
pyruvate in which the carboxyl carbon is relatively enriched
(Rinaldi et al., 1974 ; Gleixner and Schmidt,
1997 ).
Discrimination against 13C was also observed in
isoprene production. Isoprene emitted from red oak was depleted in
13C by 3 with respect to photosynthetically
fixed carbon (Sharkey et al., 1991b ). This was suggested
to be associated with isotopic discrimination by the pyruvate
dehydrogenase complex as part of the mevalonate pathway. However, this
interpretation should be revised to fit the currently accepted MEP
pathway (Lichtenthaler, 1999 ), for which the possible
discrimination steps have not yet been explicitly identified.
In the present work, we use the carbon isotopic compositions of
isoprene and of newly fixed carbon to examine the coupling between
isoprene production and photosynthetic carbon flow and to extend the
knowledge of 13C discrimination in isoprene
synthesis in leaves of myrtle (Myrtus communis), reed
(Phragmites australis), buckthorn (Rhamnus
alaternus), and velvet bean (Mucuna pruriens).
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RESULTS |
Source Effect
A change in the isotopic composition of the
CO2 supplied to a leaf enclosed in a gas-exchange
cuvette was immediately reflected in the 13C
content of the fixed carbon, fixed
(where = [Rsample/Rstandard 1] × 103 , R = 13C/12C and the standard is
Vienna Pee Dee Belemnite). It was partially reflected within 5 min in the 13C content of isoprene,
isop, emitted from myrtle leaves and reached a
constant value within about 30 min (Fig.
1). The relatively rapid response of
isop to labeling implied small isoprene pool size in the leaves, which was confirmed also by direct measurements. Only approximately 100 nmol m 2 isoprene was
obtained by extractions from leaves of myrtle-1.

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Figure 1.
Changes in the isotopic composition of
photosynthetically fixed carbon (from on-line gas exchange and isotopic
measurements) and of isoprene emitted from a branch of myrtle-3, in
response to a rapid change in the isotopic composition of the source
CO2 (at a time marked by the vertical lines). The
numbers denote the discrimination in isoprene production relative to
fixed carbon ( c-isop in per mil).
Photosynthesis was brought to steady state before the onset of the
experiment and all conditions other than the
13C of the source CO2
were kept constant throughout the experiments.
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As expected, isop values were significantly
lower than the 13C values of concurrently fixed
carbon, fixed (Fig. 1). In contrast to
expectations, however, the apparent discrimination against 13C from carbon fixed in photosynthesis to
concurrently emitted isoprene, C-isop (where
C-isop = [ fixed isop]/[ isop/1,000+1]), was sensitive to the 13C of the
CO2 supplied (Fig. 1). Similar results were
obtained using leaves of myrtle, velvet bean, and buckthorn, as
summarized in Figure 2. The variations in
the apparent discrimination in response to changes in the
13C of the CO2 supply
are reflected in the slopes of isop versus fixed, which were smaller than 1 and varied
between 0.72 ± 0.02 and 0.91 ± 0.03 (Fig. 2, a-e). In
reed, on the other hand, the apparent discrimination did not vary
significantly with changes in the 13C of the
source CO2, resulting in a slope of 1 (Fig.
2f).

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Figure 2.
Relationships between the isotopic composition of
the photosynthetically fixed carbon ( fixed;3b
from on-line gas exchange and isotopic measurements) and that of
isoprene ( isop) emitted by leaves of myrtle-1
through -3 (a-c, ), velvet bean (d), buckthorn (e), and reed (f).
The vertical lines indicate the isotopic composition of leaf organic
matter ( leaf; n between 4 and 10;
SE between 0.2 and 0.6). The horizontal lines
denote the apparent discrimination ( c-isop,
calculated from the plot assuming that leaf
represents the mean fixed during the growth
period of the leaf). The slopes of myrtle, buckthorn, and velvet bean
were significantly lower than 1 based on t test for
([slope 1]/slope SE), with
n 2 degrees of freedom. Slope
SE was 0.03 (n = 106), 0.02 (n = 83), 0.02 (n = 42), 0.04 (n = 33), 0.02 (n = 28), and 0.04 (n = 30) for plots a to f, respectively. The gray
triangles and dashed line in plot a denote the influence of ABA on
fixed and isop in a
branch of myrtle-1.
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In myrtle, we also modified fixed without
changing the CO2 supply, by changing
ci/ca through
stomatal closure induced, in turn, by abscisic acid (ABA) treatments
(30-100 µM). Stomatal conductance decreased
from 0.24 ± 0.09 to 0.02 ± 0.01 mol
m 2 s 1 (average ± SE, n = 3) and net assimilation
decreased from 7 to 1 µmol m 2
s 1. This led to a decrease in
ci/ca from
0.84 ± 0.002 to 0.61 ± 0.004 and in photosynthetic
discrimination, yielding more positive fixed
(compare with Farquhar et al., 1982 ) and
isop values (Fig. 2a). The relationships of
isop versus fixed
showed an even lower slope than that observed in the
CO2-labeling experiments (above). Additional ABA
treatments on other myrtle branches showed similar results with
relatively large variations in slopes among branches (data not shown).
The variations in apparent discrimination indicated that some of the
isoprene was not labeled by recently fixed carbon and that carbon from
a source independent of current assimilation (termed below alternative
carbon source) was incorporated into isoprene (see "Discussion").
The measurements described below were performed to characterize this
unlabeled isoprene and to recognize its carbon source.
CO2-Free Air
Measurements were carried out under CO2-free
air (or in the dark, see below) when there is no photosynthesis, to
obtain isoprene that cannot be labeled by concurrent photosynthesis.
After switching to CO2-free air, isoprene
emission was sustained for several hours, without significant change in
emission rates (Affek and Yakir, 2002 ).
isop values under
CO2-free air were constant over approximately 2 h of treatment with a mean value of 41.7 ± 1.4
(average ± SE, n = 6, in myrtle-1 and
-2 plants). This value was independent of isop
values during the several hours preceding the
CO2-free air treatment that ranged between
35 and 50 , for different pretreatment in which
13C of the CO2 supply
ranged between 8 and 31 . These results indicated that
isoprene was produced under CO2-free conditions from an unlabeled carbon source. Only when
isop preceding the treatment was as low as
approximately 60 was some depletion in
isop observed, i.e. from 41.7 to
47.9 ± 1.4 (n = 7). Isoprene emission under
CO2-free air was observed also in reed and
buckthorn leaves with isop values of 44.4 ± 2.2 (n = 2) and 45.8 ± 0.6
(n = 7), respectively, irrespective of the
isop values preceding the
CO2-free air treatment that ranged between 35 and 50 .
Emission in the Dark
In the dark, isoprene emission from myrtle decreased rapidly to
detection limit levels not sufficient for isotopic analysis. Consequently, isop was measured in the light
until a steady-state value was observed and then during the first few
minutes of darkness. isop values in the dark
followed changes in isop values in the preceding light period, such as due to changes in source
CO2. isop-dark was
slightly more depleted than isop-light (by
2.7 ± 0.7 ; n = 4) for CO2
source during the preceding light period with
13C values of either 8 or
31 .
Glc Labeling
To examine incorporation of glycolytic carbon into isoprene (Fig.
3), we fed both myrtle and buckthorn
leaves with 13C-enriched Glc
( 13CGlc was 10 as
compared with 13C of leaf organic matter of
29 or 30 ). No change in isoprene emission rates was observed
during the feeding treatments. isop and
fixed or respired
were measured at ambient or zero CO2
concentrations, respectively, with and without Glc feeding. Under
CO2-free air, both respired
CO2 and isoprene were clearly labeled by the
enriched Glc and both to a similar extent (Table
I). Under ambient
CO2 concentration, Glc feeding led to a slight
decrease in net assimilation rates, but neither
isop nor fixed
changed significantly.

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Figure 3.
Schematic representation of isoprene biosynthesis
pathway and possible coupling to cytosolic Glc metabolism and IPP. Also
noted are the sites of action of the inhibitor fosmidomycin
(Fellermeier et al., 1999 ) and of the isotopic
discrimination by DXS. DHAP, dihydroxyacetone phosphate; DMAPP,
dimethylallyl pyrophosphate; TPP, thiamine pyrophosphate.
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Table I.
Effects of feeding leaves with
13C-enriched Glc ( 13C = 10 ) on the
isotopic composition of isoprene and respired CO2, under
CO2-free air conditions
Each pair of lines denotes one branch. Average and SE refer
to three or four measurements for either control of treatment.
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Cytosolic IPP
To examine the potential effect of cytosolic IPP and the
possibility that it contributes unlabeled carbon to isoprene, we reduced chloroplastic IPP formation using fosmidomycin. In myrtle, buckthorn, and reed, fosmidomycin led to inhibition of isoprene emission, although about 10% of the emission rates persisted even after treatment (Fig. 4; compare with
Loreto and Velikova, 2001 ). Partial inhibition resulted
in 13C depletion of isop
and an increase of apparent discrimination, C-isop, from an average of 9.4 ± 0.5
before treatment to 11.4 ± 0.5 during inhibition (average ± SE, n = 8, P < 0.001;
Table II). This increase in
C-isop was observed even when
fixed and isop before
the fosmidomycin treatment were highly depleted. Notably, inhibition
with fosmidmycin resulted also in a 43% increase in leaf pyruvate
content from 23 ± 3 µmol m 2 in control
leaves to 33 ± 2 µmol m 2 after 4 h
of inhibitor treatment (3 µM; P < 0.02, n = 4).

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Figure 4.
Effects of fosmidomycin inhibition on net
assimilation ( ) and isoprene emission rates ( ) in a branch of
myrtle-1. The vertical lines indicate the beginning of fosmidomycin
feeding (5 µM at 12:30 and 10 µM at 16:20
PM). Leaf temperature was 26°C, light intensity was 250 µmol m 2 s 1, and
ci varied between 220 and 250 µL
L 1. Due to the decrease in net assimilation
observed at the high fosmidomycin used here, we used only up to 5 µM fosmidomycin in the isotopic analysis
experiments.
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Table II.
Effects of fosmidomycin on the isotopic composition
of photosynthetically fixed CO2 and of isoprene emitted
from leaves of myrtle-1 and buckthorn and on pyruvate content in
buckthorn leaves
Each line denotes four control and four treatment measurements from one
branch. For pyruvate content, leaves of four branches were extracted
and measured for either control or treatment.
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Isotopic Composition of Isoprene Emitted to the
Atmosphere
Short-term C-isop in myrtle-1 leaves was
measured under ambient air and high flow rate, to obtain typical
physiological ci and
fixed values. This yielded
C-isop of 7.7 ± 0.7
( isop = 29.2 ± 0.6 ,
fixed = 21.7 ± 0.3 , n = 8). However, measurements as in Figure 1 cannot be used to estimate
the intrinsic isotopic discrimination in isoprene production, as
indicated by the results presented in Figure 2, because of the
deviations from the 1:1 in the fixed versus
isop relationships. Alternatively, an estimate for long-term mean C-isop under natural
conditions can be obtained by substituting 13C
of total leaf organic matter ( leaf) for
fixed. For myrtle-1 this yielded mean
C-isop value of 7.7 (Fig. 2a), consistent with the values obtained in the short-term measurement. Using the same
approach, mean C-isop values in velvet bean,
reed, and buckthorn were estimated to be 4.2 , 11.0 , and 9.6 ,
respectively (Fig. 2).
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DISCUSSION |
Incomplete Coupling between Isoprene and Assimilation
The time course of changes in isop values
after a change in the isotopic composition of source
CO2 (Fig. 1) confirmed the dynamic connection
between CO2 assimilation and isoprene productions (Sharkey et al., 1991a ). Quantitatively, however, the
coupling between isoprene production and recently fixed carbon was
clearly incomplete. If concurrent photosynthetically fixed carbon was the only carbon source for isoprene, it should be reflected in isop versus fixed
relationships of 1:1. But the observed slopes of these relationships
were considerably smaller than 1 (Fig. 2). Such behavior indicates a
significant contribution from alternative carbon source(s), with
13C content independent of the
13C of the CO2 source.
Contribution from such alternative carbon source(s) with constant
13C content would be expected to enhance
C-isop when its 13C
value is more negative than current fixed, and
vice-versa when it is more positive than current
fixed. Such response was clearly observed in
the results reported in Figure 1.
As expected, possible contribution from stationary isoprene pool in the
leaves could be ruled out based on the direct measurement of only
approximately 100 nmol m 2 isoprene extractable
from myrtle leaves. Such stationary pool would support about 100 s
of emission (i.e. based on typical emission rate of 10 nmol
m 2 s 1 and 10%
contribution from alternative sources), whereas emission from an
unlabeled carbon source was sustained for several hours.
Interestingly, in previously reported labeling experiments, partial
13C labeling of isoprene has also been observed,
even though the question of alternative carbon sources was not directly
addressed. In the study of Sharkey et al. (1991b) with
red oak, C-isop was slightly smaller when
13C-depleted CO2 was used
(slope of 0.96 ± 0.04, n = 6). In another labeling study (Delwiche and Sharkey, 1993 ), most of the
isoprene emitted from red oak was rapidly labeled by
13CO2. But after 20 min,
only 80% of the isoprene was labeled, which was similar in magnitude
and time scale to the labeling pattern of phosphoglyceric acid
(Canvin, 1979 ; Delwiche and Sharkey,
1993 ). Such results also suggest a contribution from an
alternative, slow turnover, carbon source for isoprene or for
phosphoglyceric acid and subsequently for isoprene (Delwiche and
Sharkey, 1993 ). Such incomplete coupling between isoprene and
concurrently assimilated carbon may be important in models using net
assimilation to predict isoprene emission. Low isoprene emission was
observed in Scots pine (Pinus sylvestris) with only
approximately 90% labeling of the isoprene by
13CO2 (Shao et al.,
2001 ). This was explained by the possible existence of two
carbon sources, whose turnover rates are different. Similarly, only
approximately 90% labeling by newly fixed
13CO2 was observed in
non-stored sabinene in Fagus sylvatica (Kahl et al.,
1999 ) and non-stored -pinene and 3-methyl-3-buten-1-ol in
Quercus ilex (Loreto et al., 1996a ,
1996b ). The question of alternative carbon source(s) for
isoprene recently received renewed interest, and during the revisions
of this paper, two other labeling studies provided evidence for
contributions of extrachloroplastic carbon source (Karl et al.,
2002b ) or xylem-transported Glc (Kreuzwieser et al.,
2002 ).
The results of our labeling experiments were supported by those for the
ABA treatments. Modification of fixed via
changes in stomatal conductance and
ci/ca, rather
than CO2 labeling, resulted in the expected
enrichment in fixed and
isop. But here too, coupling between
fixed and isop was
incomplete (Fig. 2a). The lower slope in the ABA treatments, as
compared with the labeling experiments, was possibly due to decreased
net assimilation rates with stomatal closure that would increase the
relative contribution of the alternative source(s). Sharkey et
al. (1991b) observed a more pronounced enrichment in
isop in red oak, under conditions of very low
ci, when fixed is
expected to become more enriched.
Large variations in the slopes of the isop
versus fixed relationships from 1% to
approximately 0.7% was observed (Fig. 2). This reflected species
(genetic) effects, but likely also the effects of environmental factors
on individual plants. The dynamic nature of the variable coupling
between isoprene emission and concurrent photosynthesis was
particularly evident in reed. In this case, a slope of 1 (Fig. 2)
indicated full coupling to photosynthesis, but the emission under
CO2-free air suggested engagement of an alternative carbon source. Such dynamic response is significant because
it may help explain the reduced sensitivity of isoprene emission to
stress effect, as compared with photosynthesis (Sharkey and
Loreto, 1993 ; Loreto and Delfine, 2000 ;
Affek and Yakir, 2002 ). Further, such effect would
enhance the potential protection effects by isoprene against, for
example, oxidative stress when photosynthesis is partly inhibited
(Affek and Yakir, 2002 ).
Alternative Carbon Source(s) for Isoprene
Characteristics
To characterize the isotopic composition of the alternative carbon
source(s) for isoprene, we examined isop when
there was no net assimilation, such as under
CO2-free air (Monson and Fall, 1989 ; Loreto and Delfine, 2000 ; Affek and
Yakir, 2002 ). Under CO2-free air, we
observed relatively constant isop values,
independent of 13C of source
CO2 or isop during
pretreatments. The results under CO2-free air
indicated also that the alternative carbon source(s) always produced
isoprene with a 13C value in the range of
35 to 50 (approximately 42 on average). Labeling
measurements in this 13C range were therefore
insufficiently sensitive to clearly identify the influence of different
carbon sources. Labeling with more depleted source
CO2 (leading to pretreatment
isop of 60 ) provided a clearer labeling
effect. In this case, it could be estimated that approximately 30% of
the alternative carbon was labeled by recent photosynthesis within
3 h. That is, labeling that produced 18 effect in
isop during 3 h of pretreatment, resulted
in approximately 6 effect in isop under
CO2-free air. Such results provide a first
approximation for the turnover rate of the alternative carbon source(s), i.e. on the order of 10 h. The partial labeling of isoprene emitted under CO2-free air is consistent
with partial labeling of CO2 respired into
CO2-free air (Ludwig and Canvin, 1971 ). Although in principle, the unlabeled carbon source could result from refixation of the respired CO2, such
refixation under CO2-free air is very small
(Loreto et al., 1999 ).
Photorespiration could also be involved in carbon supply to isoprene,
and isoprene emission is inhibited when O2 is
lowered under CO2-free air (Monson and
Fall, 1989 ; Loreto and Sharkey, 1990 ). But
Hewitt et al. (1990) showed that isoprene is not
produced predominantly via photorespiration. It was previously
suggested also that photorespiratory intermediates originate from
short-term carbon storage, rapidly labeled by recent assimilation
(Ludwig and Canvin, 1971 ; Loreto et al.,
1999 ; Haupt-Herting et al., 2001 ). Such rapid
labeling is inconsistent with the possibility that photorespiration is
the source for unlabeled carbon in isoprene as observed here.
Isoprene emission in the dark may also indicate assimilation
independent carbon source(s). Emission of small amounts of -pinene in the dark was observed in Q. ilex
(Loreto et al., 2000 ) and was mostly unlabeled by
13CO2, indicating
production de novo in the dark. In Scots pine, some emission of
isoprene was observed during dark hours with approximately 90%
labeling (Shao et al., 2001 ). In the present study,
however, isoprene emission from myrtle leaves in the dark decreased
rapidly while reflecting labeling of the source
CO2 previously assimilated. Unlike the sustained
emission under CO2-free air (several hours, under
light), the small amounts of isoprene detected in the initial dark
period probably reflected residuals and not de novo production. It
seems that in the dark, the alternative carbon source(s) were not
engaged, possibly due to light dependency of isoprene synthase
(Wildermuth and Fall, 1996 ), and/or shortage in ATP,
necessary for isoprene synthesis.
Glycolytic Sources
Isoprene is produced from pyruvate and glyceraldehyde-3-phosphate
(G3P) in the chloroplasts, but these precursors can be derived either
directly from concurrent Calvin cycle intermediates or from other
metabolites such as those involved in glycolysis or from starch
reserves (Fig. 3). Pyruvate may incorporate non-photosynthetic carbon
in the cytosol before its import to the chloroplast (Givan, 1999 ). Incorporation of approximately 50% glycolitic
carbon, such as was observed by Karl et al.
(2002a) , is consistent with the observed approximately 20%
contribution to isoprene.
Carbon from Glc was incorporated into isoprenoids (Schwender et
al., 1996 ; Lichtenthaler et al., 1997b ;
Kreuzwieser et al., 2002 ). Feeding leaves with
13C-enriched Glc under ambient
CO2 concentration did not produce a detectable
signal because it was masked by much larger fluxes of
CO2 in the airflow through the leaf cuvette and
isoprene production from concurrently fixed carbon. But under
CO2-free air, 13C-enriched
Glc clearly labeled both respired CO2 and
isoprene (Table I). The effect on respired CO2
confirmed that labeled Glc was incorporated into leaf metabolism.
Further, the labeling of isoprene clearly indicated that isoprene
incorporated carbon via the glycolytic pathway. Glc metabolism is
consistent with the characteristics of the alternative carbon source(s)
for isoprene, as reflected under CO2-free air
(see above). The isotopic composition of leaf Glc is similar to
fixed under natural atmospheric conditions, and the products should undergo the same discrimination step as photosynthetically coupled isoprene. Glc, as was observed for Suc in
wheat (Triticum aestivum; Gebbing and Schnyder,
2001 ), may also correspond well with a carbon source that is
labeled by newly fixed carbon within several hours.
Cytosolic IPP
Among the possible carbon sources for the unlabeled isoprene could
also be cytosolic IPP produced from pyruvate (itself containing approximately 50% glycolitic carbon; Karl et al.,
2002a ), through the mevalonic acid pathway (Fig. 3). The
chloroplast envelope membrane is permeable to IPP (Kreuz and
Kleinig, 1984 ; Heintze et al., 1990 ), and import
of IPP is, in principle, possible (Lichtenthaler et al.,
1997a ).
This possibility, however, was not supported by our results for
fosmidomycin treatments. Partial inhibition of the MEP pathway should
enhance incorporation of cytosolic IPP, if this were an alternative
carbon source. In this case, as was observed in Figure 1, the increased
relative contribution of extrachloroplastic IPP should be accompanied
by a shift in isop toward that of the constant alternative 13C value (about 42 , see
above). Or in other words, increased contribution of cytosolic IPP
would have depleted isop in leaves where
isop before fosmidomycin treatment was
approximately 30 , would have enriched
isop of approximately 70 , and would have had little effect on isop of approximately
45 . This was clearly not the case (Table II). The inhibitor
treatments invariably resulted in more depleted isoprene, even when the
pretreatment isop was as low as 70 . Such
depletion could be the result of greater discrimination in the
mevalonic acid pathway (Jux et al., 2001 ) only if
cytosolic pyruvate is fully labeled by concurrently fixed C, in
contrast to observations (Karl et al., 2002a ). It is
unlikely that any unlabeled intermediate in leaves is depleted enough
to produce isop < 70 . We therefore
concluded that cytosolic IPP did not contribute to production of
unlabeled isoprene, and we offer below an alternative explanation to
the observed fosmydomicin-induced depletion in
13C content of isoprene.
Isotopic Discrimination
Isotopic Discrimination in the MEP Pathway
Invoking the mevalonic acid pathway, Sharkey et al.
(1991b) argued for discrimination by pyruvate dehydrogenase
leads to 13C-depleted isoprenoids. Recent works
indicate, however, a non-mevalonate, MEP pathway (Zeidler et
al., 1997 ; Lichtenthaler, 1999 ). Discrimination steps in the MEP pathway are not explicitly known, but the step highly
prone to isotopic discrimination is the decarboxylation of pyruvate
through deoxyxylulose-5-phosphate synthase (DXS). Pyruvate
decarboxylation and reaction with G3P is achieved through thiamine
pyrophosphate (Rohmer et al., 1996 ), as in the
decarboxylation step of acetyl CoA production by mitochondrial pyruvate
dehydrogenase complex, and is likely to have similar discrimination.
As mentioned above, whereas isoprene was always depleted in
13C relative to photosynthetic intermediates, an
increase in this depletion (i.e. increase in
C-isop) was observed in isoprene emitted from
fosmidomycin-treated leaves. This is consistent with discrimination
against 13C occurring upstream from the inhibited
step, namely the steps catalyzed by either DXS or
deoxyxylulose-5-phosphate reductoisomerase (DXR). Kinetic isotopic
discrimination, which is always expressed in the rate-limiting step
(O'Leary, 1981 ; Cleland, 1982 ),
downstream of DXR would be reduced or eliminated by the fosmidomycin
inhibition, contrary to observations.
Furthermore, observations that deoxyxylulose 5-phosphate does not
accumulate in the presence of fosmidomycin (Lange et al., 2001 ) argue against DXR as the discrimination step (but note
that consumption of DOXP by other reactions cannot be ruled out at this
stage). Our results of increased discrimination associated with
pyruvate accumulation in conjunction with the currently held view of
isoprene synthesis are therefore consistent with the DXS step as the
rate-limiting and discriminating step (although this hypothesis will
require further confirmation).
Isotopic Composition of Isoprene Emitted to the Atmosphere
The isotopic composition of atmospheric trace gases is a powerful
tool to trace sinks and sources of these gases and underlying processes
(Griffiths, 1998 ). Recently, the potential in using the
isotopic composition of plant biomarkers in large-scale studies of
terrestrial photosynthesis has been demonstrated (Conte and Weber, 2002 ). There is similar potential in using the isotopic composition of isoprene and other VOCs, that has not been realized. Very little information is available on the natural abundance isotopic
composition of isoprene, as well as on what influences it.
The isotopic composition of isoprene, isop,
must reflect the additive effect of A, the
discrimination in photosynthetic carbon assimilation (Lloyd and
Farquhar, 1994 , and refs. therein), and that in the isoprene
pathway, C-isop, to produce the total discrimination total = A + C-isop. Taking a
typical mean A value of 17 (Bakwin
et al., 1998 ), mean total values would
be around 17 + 7 = 24 .
It is now generally accepted that A can vary
with time and plant species. In this study, we provide evidence that
C-isop can vary at least between 4 and
11 (Fig. 2), a range that exceeds previously reported value for red
oak (2.8 ± 0.4 ; Sharkey et al., 1991b ). We
further demonstrate that it is possible to separate estimates of
C-isop from A by
combining direct isotopic measurements of atmospheric
CO2 and isoprene and estimates of
A based on gas-exchange approach of
Evans et al. (1986 ; for the ecosystem scale, see
Bowling et al., 2001 ) or by using
C-isop in a monospecific canopy to estimate
A. Better knowledge of
total in different ecosystems will allow the
use of atmospheric isop measurements to trace sources of this compound. The ability to deconvolute the isotopic signal to A and
C-isop can provide insights on processes
associated with, for example, plants response to environmental stresses.
 |
MATERIALS AND METHODS |
Plant Material
Plants of velvet bean (Mucuna pruriens) were
grown from seeds (Glendale Enterprises Inc., De Funiak Springs, FL)
under ambient light and temperatures. Measurements were conducted on
fully expanded, attached leaves. Mature branches of myrtle-1 and -2 (Myrtus communis) and buckthorn (Rhamnus
alaternus) and leaves of reed (Phragmites australis) were cut under water from plants grown on the campus of the Weizmann Institute of Science (Rehovot, Israel) and were kept
with the stem immersed in deionized water. Some measurements were done
using attached myrtle leaves from plants grown in pots in a greenhouse.
Potted plants were transferred to the campus at least a week before
measurements (myrtle-3). Typical isoprene emission rates were
approximately 10 nmol m 2 s 1 in all plants used.
Gas Exchange
Net assimilation rates, isoprene emission rates, and the
isotopic composition of isoprene were measured with a leaf gas exchange system centered on a flow-through leaf cuvette in which the leaves were
sealed. Net assimilation rates were measured using an infrared gas
analyzer (Li-6262, LI-COR, Lincoln, NE) under light intensity of 1,000 µmol m 2 s 1 photosynthetically active
radiation and leaf temperature of 26°C ± 0.5°C. An aliquot of
the air in the leaf cuvette was pumped through a loop on a six-port
valve (Valco Instruments Co, Houston, TX), which was cooled by a
mixture of ethanol and dry ice ( 75°C) for trapping the
hydrocarbons. After trapping, the valve was switched to a flow of He,
the loop was rapidly heated (200°C), and the trapped hydrocarbons
passed to a gas chromatography (GC) column (GC-HP 5890, Wilmington,
DE). The details of the gas exchange and isoprene sampling system are
given in Affek and Yakir (2002) .
Isotopic Analysis of Isoprene and Leaf Organic Matter
The isotopic composition of isoprene ( isop) was
determined after GC separation using a Q-plot GC column (Supelco,
Bellefonte, PA; 30 m long, 0.32 mm inner diameter; temperature
program, 50°C for 1 min 10°C min 1 170°C for 2 min) and combustion to CO2. This GC column
was selected because it provided good separation of isoprene and the large CO2 peak (that interfered with isoprene in other
columns). Retention times of CO2 and isoprene were 300s and
700s, respectively, providing complete separation. A selection valve
(see below) enabled us to direct the CO2 peak to the flame
ionization detector (FID), whereas only the isoprene peak was directed
to the mass spectrometer. Testing on other columns (with myrtle and
buckthorn) confirmed that they emit only isoprene (Affek and
Yakir, 2002 ), and velvet bean and reed are commonly known as
such. Furthermore, we tested separation of isoprene from several
monoterpenes and 2-methyl-3-buten-2-ol and obtained good results with
the Q-plot column.
A selection valve (MOVPT-1/100 pneumatic valve, SGE, Melbourne,
Australia) was used to direct the flow eluting the GC column to
either a FID or a combustion oven (CuO, 850°C) in which the desired
GC peaks were each combusted quantitatively to CO2. FID was
used for isoprene concentration measurements. The CO2
resulting from the combustion oven was used for isotopic composition
measurements. The CO2 from combustion was dried in a cold
trap and fed in a flow of He, through an open split, to an isotope
ratio mass spectrometer (IRMS; Optima, Micromass, Manchester,
UK), where masses 44, 45, and 46 were measured. The ratio 45 to
44 was normalized to a pulse of CO2 reference gas injected
before each sample. The isotopic results are expressed in the (per
mil) notation versus Vienna Pee Dee Belemnite standard, where
= (R/Rstd 1) × 1,000 and R, Rstd
are the isotopic ratios 13C/12C of the sample
and the standard, respectively.
For isotopic calibration, liquid isoprene was injected into a
pre-evacuated glass bulb (10 L, 60 mtorr), and air or N2
was added to atmospheric pressure. Aliquots were sampled and measured at the end of each experiment in a similar manner to the air in the
leaf cuvette. Typical precision for isoprene standard measurements was
±0.3 , and the 13C of isoprene standard in either air
or in N2 was the same, indicating no influence of
CO2 on isop. The 13C of the
liquid isoprene was predetermined by comparison with international and
laboratory working standards, which were measured by conventional
on-line combustion elemental analyzer (EA1109 CHN-O, Carlo Erba
Instruments, Milan) connected to IRMS (Optima, Micromass). Ground whole
dry leaves were measured by combustion in the same elemental analyzer
to obtain 13C values of total leaf organic matter
( leaf).
Isotopic Analysis of CO2
isop was compared with the isotopic composition
estimated for newly fixed carbon ( fixed), based on
isotopic measurements of the CO2 in the leaf cuvette.
Samples of the air entering and leaving the leaf cuvette were dried and
collected in glass flasks (100 mL) and 13C of the
CO2 was measured as described by Gillon and Yakir
(2000) . The CO2 from each flask was trapped in
liquid N2 in a sample loop (1/16 inch outer diameter, 350 µL), which was then heated; and the sample was carried in a flow of
He (80 mL min 1), separated on a Porapak QS packed column
(Supelco; 2 m, 50-80 mesh, 50°C) or Haysep D (Supelco; 3 m, 80°C), and analyzed for isotopic composition by IRMS (either
Optima or a 20-20 [PDZ Europa, Crewe, Cheshire, UK]).
fixed was estimated by on-line discrimination calculations (Evans et al., 1986 ) using the
CO2 concentrations and 13C in the air
entering and leaving the leaf cuvette.
CO2 was calibrated by measuring air from cylinders of 400 or 1,000 µL L 1 CO2 having different
13C values that were, in turn, calibrated by comparing
with a cylinder of 400 µL L 1 CO2 of known
13C value. Typical precision of 13C analysis
in CO2 was ±0.15 .
Air containing CO2 of various isotopic compositions was
supplied to leaves during experiments. Ambient air
( 13C of approximately 8 ) was pumped through a
50-L external buffering volume and dried using drierite (8 mesh; W.A.
Hammond Drierite, Xenia, OH). Cylinder air containing no
CO2 was mixed via mass flow controllers (MKS1179A, MKS
instruments, Andover, MA) with cylinder air (Gordon Gas and Chemicals,
Tel Aviv) containing 1% or 2.5% (v/v) CO2
whose 13C value was 48 , 33 , or 27 .
Cylinder air mixture containing 383 or 366 µL L 1
CO2 whose 13C value was 13 or 42 ,
respectively, were also used.
CO2-Labeling Experiments
Experiments testing the effect of the fixed on
isop were performed by measuring both parameters when
the leaf cuvette was supplied with air of ambient CO2
concentration and of a certain 13C value. After
approximately 2 h of constant fixed and
isop, the source CO2 was rapidly switched,
changing the 13C but not any of the gas-exchange
parameters. fixed and isop were measured
for an additional 2 h under the new source
CO2.
Few experiments were done in the dark or under CO2-free
air. Gas-exchange parameters and the isotopic composition of isoprene and CO2 were measured in the light and under ambient
CO2 concentration during few hours to obtain control
values. For CO2-free air measurements, the air supply to
the leaf cuvette was switched rapidly to CO2-free air.
CO2 produced by respiration resulted in 10 to 20 µL
L 1 CO2 in the cuvette. Gas-exchange
parameters and the isotopic composition of isoprene and CO2
were measured under these conditions during 2 to 4 h. For
measurements in the dark, the leaf cuvette was covered by a dark cloth.
The isotopic composition of isoprene was measured within 10 min (after
longer times, isoprene emission was too low for isotopic measurements).
Isoprene Pool in Leaves
The amount of isoprene stored in 10 myrtle leaves was measured
by freezing leaves in liquid N2 immediately after cutting
and extracting the volatile fraction by heating under a flow of He (Loreto et al., 1998 ). The sample was dried by magnesium
perchlorate (Aldrich Chemical Co., Milwaukee), trapped in a loop cooled
by a mixture of ethanol and dry ice, heated, and measured by GC, as
described above. Magnesium perchlorate was examined separately and was
found to influence neither the concentration nor the isotopic composition of an isoprene standard.
Labeled Glc and Inhibitor Feeding
All chemicals used in our experiments were fed to the leaves as
aqueous solutions through the petiole. Fosmidomycin (Molecular Probes,
Eugene, OR) was fed at concentrations of 5 to 20 µM for emission rates measurements and 2 to 5 µM for isotopic
analysis experiments. Measurements were performed during approximately 2 h before feeding and then during 2 h, beginning
approximately 1 h after onset of fosmidomycin feeding.
D-Glc (BDH Chemicals, Poole, Dorset, UK;
13C = 10 ) was fed at concentration of 15 mM. Measurements were done during few hours before feeding
at both ambient CO2 concentrations and CO2-free
air. Then, feeding of Glc were performed during approximately 2 h
under ambient CO2 concentration and continued for an
additional 2 h under CO2-free air.
Pyruvate Content
Water soluble fraction of leaves was extracted from leaf-discs
(total area of 15 cm2) as described by Duranceau et
al. (1999) . Pyruvate was separated by ProStar HPLC (Varian,
Palo Alto, CA) with an AS11 column (Dionex, Sunnyvale, CA) at 24°C,
with NaOH concentration gradient of 0.4 to 22.5 mM as
eluent, at 2 mL min 1, and measured by a Dionex ED50
electrochemical detector.
Statistical Analysis
Statistical analysis was done using the t test
and regression functions in the data analysis add-in from Microsoft
Excel 2001 for Macintosh (Microsoft Corp., Redmond, WA).
 |
ACKNOWLEDGMENTS |
We thank E. Negreanu, R. Yam, and anonymous reviewers for
helpful comments.
 |
FOOTNOTES |
Received August 1, 2002; returned for revision October 14, 2002; accepted December 27, 2002.
*
Corresponding author; e-mail
dan.yakir{at}weizmann.ac.il; fax 972-8-9344124.
Article, publication date, and citation information can be found at
www.plantphysiol.org/cgi/doi/10.1104/pp.102.012294.
 |
LITERATURE CITED |
-
Affek HP, Yakir D
(2002)
Protection by isoprene against singlet oxygen in leaves.
Plant Physiol
129: 269-277[Abstract/Free Full Text]
-
Bakwin PS, Tans PP, White JWC, Andres RJ
(1998)
Determination of the isotopic (13C/12C) discrimination by terrestrial biology from a global network of observations.
Global Biogeochem Cycles
12: 555-562
-
Bowling DR, Tans PP, Monson RK
(2001)
Partitioning net ecosystem carbon exchange with isotopic fluxes of CO2.
Global Change Biol
7: 127-145
-
Canvin DT
(1979)
Photorespiration: comparison between C3 and C4 plants.
In
M Gibbs, E Latzko, eds, Encyclopedia of Plant Physiology NS, Vol. 6: Photosynthesis II. Springer-Verlag, Berlin, pp 368-396
-
Chameides WL, Lindsay RW, Richardson J, Kiang CS
(1988)
The role of biogenic hydrocarbons in urban photochemical smog: Atlanta as a case study.
Science
241: 1473-1475[Abstract/Free Full Text]
-
Cleland WW
(1982)
Use of isotope effects to elucidate enzyme mechanisms.
CRC Crit Rev Biochem
13: 385-428[ISI][Medline]
-
Conte MH, Weber JC
(2002)
Plant biomarkers in aerosols record isotopic discrimination of terrestrial photosynthesis.
Nature
417: 639-641[CrossRef][Medline]
-
Delwiche C, Sharkey T
(1993)
Rapid appearance of 13C in biogenic isoprene when 13CO2 is fed to intact leaves.
Plant Cell Environ
16: 587-591[CrossRef]
-
DeNiro MJ, Epstein S
(1977)
Mechanism of carbon isotope fractionation associated with lipid synthesis.
Science
197: 261-263[Abstract/Free Full Text]
-
Duranceau M, Ghashghaie J, Badeck F, Deleens E, Cornic G
(1999)
13C of CO2 respired in the dark in relation to 13C of leaf carbohydrates in Phaseolus vulgaris L. under progressive drought.
Plant Cell Environ
22: 515-523[CrossRef] -
Evans JR, Sharkey TD, Berry JA, Farquhar GD
(1986)
Carbon isotope discrimination measured concurrently with gas exchange to investigate CO2 diffusion in leaves of higher plants.
Aust J Plant Physiol
13: 281-292
-
Farquhar GD, O'Leary MH, Berry JA
(1982)
On the relationship between carbon isotope discrimination and the intercellular carbon dioxide concentration in leaves.
Aust J Plant Physiol
9: 121-137[ISI]
-
Fellermeier M, Kis K, Sagner S, Maier U, Bacher A, Zenk MH
(1999)
Cell-free conversion of 1-deoxy-D-xylulose 5-phosphate and 2-C-methyl-D-erythritol 4-phosphate into
-carotene in higher plants and its inhibition by fosmidomycin.
Tetrahedron Lett
40: 2743-2746[CrossRef] -
Gebbing T, Schnyder H
(2001)
13C labeling kinetics of sucrose in glumes indicates significant refixation of respiratory CO2 in the wheat ear.
Aust J Plant Physiol
28: 1047-1053
-
Gillon JS, Yakir D
(2000)
Internal conductance to CO2 diffusion and C18OO discrimination in C3 leaves.
Plant Physiol
123: 201-213[Abstract/Free Full Text]
-
Givan CV
(1999)
Evolving concepts in plant glycolysis: two centuries of progress.
Biol Rev
74: 277-309[CrossRef]
-
Gleixner G, Schmidt HL
(1997)
Carbon isotope effects on the fructose-1,6-bisphosphate aldolase reaction, origin for non-statistical 13C distribution in carbohydrates.
J Biol Chem
272: 5382-5387[Abstract/Free Full Text]
-
Griffiths H
(1998)
Stable Isotopes-integration of Biological, Ecological and Geochemical Processes. BIOS Scientific Publishers, Oxford
-
Guy RD, Fogel ML, Berry JA
(1993)
Photosynthetic fractionation of the stable isotopes of oxygen and carbon.
Plant Physiol
101: 37-47[Abstract]
-
Haupt-Herting S, Klug K, Fock HP
(2001)
A new approach to measure gross CO2 fluxes in leaves: gross CO2 assimilation, photorespiration, and mitochondrial respiration in the light in tomato under drought stress.
Plant Physiol
126: 388-396[Abstract/Free Full Text]
-
Heintze A, Görlach J, Leuschner C, Hoppe P, Hagelstein P, Schulze-Siebert D, Schultz G
(1990)
Plastidic isoprenoid synthesis during chloroplast development.
Plant Physiol
93: 1121-1127[Abstract/Free Full Text]
-
Hewitt NC, Monson RK, Fall R
(1990)
Isoprene emissions form the grass Arundo donax L. are not linked to photorespiration.
Plant Sci
66: 139-144[CrossRef]
-
Jux A, Gleixner G, Boland W
(2001)
Classification of terpenoids according to the methylerythritolphosphate or the mevalonate pathway with natural 12C/13C isotope ratios: dynamic allocation of resources in induced plants.
Angew Chem Int Ed
40: 2091-2093[CrossRef]
-
Kahl J, Hoffmann T, Klockow D
(1999)
Differentiation between de novo synthesized and constituitively released terpenoids from Fagus sylvatica.
Phytochemistry
51: 383-388[CrossRef]
-
Karl T, Curtis AJ, Rosenstiel T, Monson RK, Fall R
(2002a)
Transient releases of acetaldehyde from tree leaves: products of a pyruvate overflow mechanism?
Plant Cell Environ
25: 1121-1131[CrossRef]
-
Karl T, Fall R, Rosentiel TN, Prazeller P, Larsen B, Seufert G, Lindinger W
(2002b)
On-line analysis of the 13CO2 labeling of leaf isoprene suggests multiple subcellular origins of isoprene precursors.
Planta
215: 894-905[Medline]
-
Kesselmeier J, Staudt M
(1999)
Biogenic volatile organic compounds (VOC): an overview on emission, physiology and ecology.
J Atmos Chem
33: 23-88
-
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