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First published online November 6, 2003; 10.1104/pp.103.029215 Plant Physiology 133:1935-1946 (2003) © 2003 American Society of Plant Biologists Effect of Manganese Toxicity on the Proteome of the Leaf Apoplast in Cowpea1Institute of Plant Nutrition, University of Hannover, Herrenhäuser Strasse 2, 30419 Hannover, Germany (M.M.F.-C., W.J.H.); Department of Applied Genetics, University of Hannover, Herrenhäuser Strasse, 30419 Hannover, Germany (H.-P.B.); and Laboratoire de Spectrométrie de Masse Bioorganique, Unité Mixte de Recherche 7509, 25 rue Becquerel, F-67087 Strasbourg cedex 2, France (C.L.-G., A.V.)
Excess manganese (Mn) supply causes formation of visible brown depositions in the cell walls of leaves of cowpea (Vigna unguiculata), which consist of oxidized Mn and oxidized phenols. Because oxidation of Mn and phenolic compounds in the leaf apoplast was proposed to be catalyzed by apoplastic peroxidases (PODs), induction of these enzymes by Mn excess was investigated. POD activity increased upon prolonged Mn treatment in the leaf tissue. Simultaneously, a significant increase in the concentration of soluble apoplastic proteins in "apoplastic washing fluid" was observed. The identity of the released proteins was systematically characterized by analysis of the apoplast proteome using two-dimensional gel electrophoresis and liquid chromatography-tandem mass spectrometry. Some of the identified proteins exhibit sequence identity to acidic PODs from other plants. Several other proteins show homologies to pathogenesis-related proteins, e.g. glucanase, chitinase, and thaumatin-like proteins. Because pathogenesis-related-like proteins are known to be induced by various other abiotic and biotic stresses, a specific physiological role of these proteins in response to excess Mn supply remains to be established. The specific role of apoplastic PODs in the response of plants to Mn stress is discussed.
For a wide range of plant species, formation of brown spots is part of a characteristic development of Mn toxicity symptoms in older leaves. The subsequent development of chlorosis and necrosis and finally leaf shedding occurs before a reduction in vegetative growth on the whole plant level (Horst, 1988 To get a better understanding of the specific involvement of POD and other proteins in the response of cowpea plants to Mn excess, observations on changes of POD activities and further physiological changes in the apoplast were investigated at different stages of Mn toxicity. Furthermore, two-dimensional (2D) gel electrophoresis techniques were used for the separation of apoplastic water-soluble proteins followed by a systematic identification of proteins using nanoscale capillary liquid chromatography-tandem mass spectrometry (nano LC-MS/MS). Most of the identified proteins exhibit sequence similarity to previously characterized proteins from other organisms, which partially are known to play roles in stress defense. These proteins represent new tracks for the investigation of Mn stress in higher plants.
Effect of Mn Treatment Duration on Mn Uptake, Activity of Apoplastic Guaiacol- and NADPH-POD, Protein Concentration in the "Apoplastic Washing Fluid" (AWF), and Callose Formation Mn is readily taken up by cowpea plants and transported to leaves. The Mn tissue content increased exponentially 40-fold during 6 d of treatment with 50 µM Mn (Fig. 1A). The related increase of the Mn concentration in the AWF followed a saturation curve (Fig. 1B) with a significant increase already after 1 d of Mn treatment. The ratio of water-soluble Mn in the AWF and total Mn of cowpea leaves was about 0.3% (Fig. 1C). After 1 d of Mn treatment, it increased significantly to 1.2%. After 3 d of Mn treatment, it decreased to the initial ratio which seems to represent an equilibrium with the total Mn in the tissue.
After 2 d of Mn treatment, the first visible Mn toxicity symptoms (brown spots) were detectable (Fig. 2). The development of Mn toxicity symptoms was significantly correlated with the Mn tissue content (Fig. 2). An equally sensitive indicator of Mn toxicity appeared to be the induction of callose synthesis in the leaves (Fig. 3). After 2 d of Mn treatment, callose content started to increase and was significantly higher after 3 d. The activities of both guaiacol- and NADH-PODs (Fig. 4, A and B) in the leaf AWF increased after 2 d of exposure to elevated Mn supply. This was accompanied by the release of proteins into the apoplast (Fig. 4C). In summary, formation of brown spots, activity of enzymes, the protein concentration, and the callose induction were significantly correlated with the Mn tissue contents (Figs. 2, 3, 4).
To systematically monitor the induction of apoplastic proteins upon Mn treatment, AWF was analyzed by BN-PAGE. For this procedure, Coomassie dyes are used before electrophoresis to introduce negative charges into proteins and protein complexes without denaturing them. BN-PAGE allows proteins to be efficiently resolved under native conditions. Subsequently, proteins can be visualized by Coomassie Blue staining and PODs by in-gel activity measurements using guaiacol as a substrate, which leads to the formation of a brown-colored oxidation product (Fig. 5). Mn treatment causes an induction of several apoplastic PODs in the 30-kD range (Fig. 5A). Before treatment (d = 0), POD activity was expressed by two to three bands in the gel. These bands became stronger upon prolonged Mn treatment. Furthermore, new bands became visible after 2 d of Mn treatment (Fig. 5A). The staining of the gel with Coomassie Blue showed additional proteins, which also were induced by Mn treatment (Fig. 5B).
Because the Mn toxicity-induced PODs have very similar molecular masses, BN gel electrophoresis was combined with SDS-PAGE to increase resolution capacity (Fig. 6). Most protein bands of the native gel dimension were separated into at least two protein spots in the second gel dimension. Several protein spots became specifically visible upon Mn treatment (Fig. 6B). Representative spots of the constitutive POD and Mn-induced proteins were cut out of the gel and analyzed by LC-MS/MS (Table I). The sequence of one peptide of protein number 4 exhibits significant sequence identity to previously characterized PODs from other plant species (Table I). Additional bands identified as POD by guaiacol staining showed sequence similarity to thaumatin-like proteins (spot 5). Further Mn-induced proteins were identified as chitinases (spot 1 and 7), glucanases (spot 1), fascilin-like arabinogalactan-protein (spot 7), hevein-like and wound-induced proteins (spot 8), and pathogenesis-related (PR) proteins class 1 (spot 10). Most of the proteins show similar molecular masses in the range of 20 to 30 kD, which caused overlappings of proteins on 1D and 2D gels. To further improve resolution of proteins from the AWF, a second 2D gel system was employed, which is based on isoelectric focusing (IEF) for the first gel dimension and SDS-PAGE for the second (Fig. 7).
In agreement with the results obtained by 2D BN-PAGE, 2D IEF/SDS-PAGE allowed visualization of several proteins that are specifically induced upon Mn treatment, including a group of proteins in the 25- to 30-kD range (protein nos. 2, 3, 8, 9, and 10 on Fig. 7B). These proteins are clustered at pH 6 to 9. Another group of proteins can be found in the 40-kD range at acidic pH (protein nos. 13, 14, 16, 18, and 20). Analysis of selected protein spots by nano LCMS/MS allowed determination of peptide sequences (Table II). On the basis of sequence similarity to characterized proteins from other organisms, the analyzed proteins represent PR proteins (spots 2, 8, 9, and 10), chitinases (spots 13, 14, and 16), 1,3-
PODs in the Leaf Apoplast
The leaf apoplast is a compartment of storage and physiological reactions like intercellular signaling, defense against biotic and abiotic stresses, and transport of water and nutrients (Sakurai, 1998
PODs were also proposed to be able to produce H2O2 necessary for lignification (Mäder and Amberg-Fisher, 1982
Additionally, PODs were also proposed to act as polyfunctional enzymes operating simultaneously as oxidase and POD (Pedreño et al., 1995
In cowpea, the synchronous increase in POD and the formation of brown spots suggest a close relationship between the expression of Mn toxicity symptoms and the activity of water-soluble POD extracted from the apoplast (Figs. 2 and 4). The Mn-induced increase of POD activity was also reflected by the induced presence of several proteins on BN gels (Fig. 5). Among these, one protein of approximately 32 kD was identified as POD on the basis of sequence similarity to known PODs from other organisms (no. 4 in Fig. 6 and Table I). PODs, which specifically were induced upon Mn treatment, could also be identified by 2D IEF/SDS-PAGE in the acidic pH range (Fig. 7). The estimated pI values indicate that these POD isoenzymes belong to the group of acidic PODs. These pI values differ in some cases from the pI values reported in the literature. This discrepancy might be due to the broad variance of POD isoenzymes in plants. Even within plant species, POD isoenzymes may differ by more than 50% in peptide sequence (Welinder, 1992
The NADH oxidation rate showed a similar reaction pattern as the "guaiacol-PODs," indicating that PODs in the apoplast of cowpea were able to react with guaiacol and NADH as well (Fig. 4). After the 1st d of treatment, a slight increase of NADH-POD was detectable without a marked change in POD-isoenzyme composition. This was accompanied by a slight increase in callose formation. The physiological role of callose formation in response to toxic Mn levels in the tissue is unknown, but its detection serves as an additional sensitive parameter for Mn-induced injury of the leaf tissue (Wissemeier and Horst, 1987
The release of PODs in the apoplast was accompanied by the secretion of proteins that show similarities to wound-induced proteins and PR enzymes, e.g. glucanase, chitinase, and thaumatin-like proteins and PR proteins class I. Furthermore, the gels in Figures 6 and 7 still exhibit regions with high spot density, indicating that further proteins might exist that overlap in the 2D gels. This fact is also reflected by the identification of peptides from single protein spots, which exhibit sequence identity to different proteins from databases. Despite this variability, the partial agreement between the data in Tables I and II demonstrates their reproducibility. PR-denominated proteins in plant tissues are induced by pathogens, and their expression often was confirmed independently for more than one plant-pathogen combination. Homologous proteins not induced by pathogens are denominated PR-like proteins (van Loon and van Strien, 1999
In this work, physiological and proteomic changes were studied at different stages of Mn toxicity to get a better understanding of the role of Mn-induced processes in the leaf apoplast in the expression of Mn toxicity. The appearance of Mn toxicity symptoms was preceded by a steep increase of the Mn concentration of the AWF indicating a particular role of free apoplastic Mn in the expression of Mn toxicity despite its low contribution to the total Mn content of the leaf. Mn excess almost simultaneously induced the formation of brown spots and callose, the activation of guaiacol- and NADH-PODs, and the release of proteins into the apoplast. The analysis of the proteome of the leaf apoplast has placed previous results and speculations about the physiology of Mn toxicity (Horst et al., 1999
Plant Material Cowpea (Vigna unguiculata [L.] Walp. cvs TVu 91 and TVu 1987) was grown hydroponically in a growth chamber under controlled environmental conditions at 30°C/25°C day/night temperature, 75% ± 5% relative humidity, and a photon flux density of 270 µmol m-1 s-1 photosynthetic active radiation at mid-plant height during a 16-h photoperiod. After germination in 1 mM CaSO4, seedlings were transferred to a constantly aerated nutrient solution. After preculture, the MnSO4 concentration in the nutrient solution was increased, whereas control plants received 0.2 µM Mn continuously. The nutrient solution was changed two to three times a week to avoid nutrient deficiencies.
For the quantification of Mn toxicity symptoms, the density of brown spots was counted on a 1 cm2 area at the base, middle, and tip on the upper side of the trifoliate leaf.
AWF was extracted by a vacuum infiltration/centrifugation technique. Leaves were infiltrated with water by reducing the pressure to 35 hPa followed by a slow relaxation for 2 min. The AWF was recovered by centrifugation at 1,324g for 5 min at room temperature.
Mn in the bulk-leaf tissue was determined after dry ashing (480°C, 8 h) and dissolving the ash in 6 M HCl with 1.5% (w/v) hydroxylammonium chloride and diluted 1:10 with water. AWF was diluted 1:10, whereas HCl and hydroxylammonium chloride were added to give final concentration of 0.6 M HCl and 0.15% (w/v) hydroxylammoniumchloride. Measurements were carried out by optical emission spectroscopy, inductively-coupled plasma (Spectro Analytical Instruments GmbH, Kleve, Germany).
For the measurement of callose formation, four leaf discs (150 mg fresh weight) were cut out of the leaf and fixed in ethanol. After 3 d, ethanol was replaced by demineralized water and incubated over night. Leaf discs were homogenized in 1 mL of 1 M NaOH, and homogenates were incubated for 15 min at 80°C in a water bath. After centrifugation at 13,000g for 5 min, 100 µL of the supernatant was mixed with 600 µL of the anilin mix (0.59 M Gly buffer [pH 9.5], 0.21 M HCl, and 0.04% [w/v] anilin blue) and incubated in a 50°C water bath for 20 min. After cooling the samples down to room temperature, the callose concentration was measured by detecting the fluorescence at excitation wavelength/bandpath of 400 nm/30 nm and emission wavelength/bandpass of 485 nm/40 nm with a microplate reader (BioTek-Instruments, Germany). Control measurements were done with Gly-HCl-buffer solution without anilin blue. For the calculation, the molar extinction coefficient
Guaiacol-POD activities in the AWF were determined spectrophotometrically at
The protein concentration in the AWF was measured according to Bradford (1976
For protein separation by electrophoresis under native conditions, the proteins of the AWF were purified at 4°C by using centrifugal concentrators with a molecular mass cut off at 5 kD (Vivaspin 6, Vivasience, Hannover, Germany). Run conditions were used according to the manufacturer's instructions. For the separation by IEF, proteins were extracted by phenol and precipitated by acetate/methanol. The volume of the AWF was reduced by lyophilization. The sample was mixed with extraction buffer (700 mM saccharose, 500 mM Tris, 50 mM EDTA, 100 mM KCl, and 2% [v/v] mercaptoethanol), and after incubation for 10 min on ice, an equal volume of phenol (saturated solution, pH 6.6/7.9, [Tris], FA Amresco, Solon, OH) was added and shaken for 30 min. The aqueous and organic phases were separated by centrifugation for 10 min at 5,000g and 4°C. The phenolic phase was re-extracted with extraction buffer and centrifuged once more. The phenol phase was combined with 5 volumes of 0.1 M ammonium acetate in methanol and incubated for approximately 14 h at -20°C. After centrifugation at 20,000g for 5 min at 4°C, precipitated proteins were washed three times with ammonium acetate in methanol and finally with acetone. The protein samples were air dried and resuspended immediately before electrophoresis.
A detailed protocol for 2D BN/SDS-PAGE was published by Schägger (2001
For separation of proteins by their pI, the IPGphor system (Amersham Biosciences, Uppsala) availing Immobiline DryStrip gels (18 cm) with a nonlinear pH gradient (pH 3-10) was used. Proteins were resuspended in demineralized water and supplemented with a rehydration solution (8 M urea, 2% [w/v] CHAPS, 0.5% [v/v] carrier ampholyte mixture [IPG buffer, Amersham Biosciences], and a trace of bromphenol blue). Focusing conditions were used according to Werhahn and Braun (2002
2D gels and the 1D BN gels were stained with colloidal Coomassie Blue according to Neuhoff et al. (1985
After staining with colloidal Coomassie Blue, single proteins were cut out and transferred in Eppendorf vessel. Exised slices rinsing and reduction/alkylation steps were performed by the Massprep robot (Micromass, Manchester, UK). Each piece of gel was washed with 100 µL of 25 mM NH4HCO3 and dehydrated with 100 µL of acetonitrile (ACN). This operation was repeated twice. Reduction was achieved by a 1-h treatment with 10 mM dithiothreitol at room temperature. Alkylation reaction was performed by 25 mM iodacetamide for 45 min at room temperature and protected from light. Finally, gel spots were washed three times for 5 min again alternately with 25 mM ammonium carbonate and ACN. Gel pieces were completely dried before tryptic digestion and rehydrated by trypsin addition. About 3 volumes of trypsin freshly diluted (12.5 ng µL-1 in 25 mM NH4HCO3 buffer) was added to the sample. Digestion was performed overnight. The gel pieces were centrifuged, and 60 µL of 35% (v/v) H2O/60% (v/v) ACN/5% (v/v) formic acid (HCOOH) was added to extract peptides. The mixture was sonicated for 30 min. The supernatant was recovered, and the operation was repeated once. For nano LC-MS/MS, the supernatants were transferred into a 96-well plate, and the peptide extraction volume was reduced to 10 µL by evaporation to concentrate the peptides and to remove the ACN from the sample before being injected in the HPLC system. Nano LC-MS/MS analysis of the digested proteins were performed using a CapLC capillary LC system (Micromass) coupled to a hybrid quadrupole orthogonal acceleration time-of-flight tandem mass spectrometer (Q-TOF II, Micromass). Sample (6.4 µL) was loaded and concentrated onto a C18 PepMap precolumn (LC Packing) under a 30 µL min-1 flow rate and flushed for 3 min with 0.1% (v/v) ACN before gradient started to elute the peptides straight to the following separative column. Chromatographic separations were then performed on a reversed-phase capillary column (Pepmap C18, 75 µm i.d., 15 cm length; LC Packings) under a 200 µL min-1 flow rate generated by the CapLC delivering a flow rate of 4.5 µL min-1 split right after the precolumn. The gradient profile used consisted of a linear gradient from 95% A (H2O/0.1% [v/v] HCOOH) to 60% B (ACN/0.1% [v/v] HCOOH) in 35 min followed by a linear gradient to 95% B in 1 min. Mass data acquisitions were piloted by MassLynx software (Micromass). When MS/MS required, automatic switching between MS and MS/MS modes was used, and the internal parameters of Q-TOF II were set as follows. The electrospray capillary voltage was set to 3.5 kV, the cone voltage was set to 40 V, and the source temperature was set to 120°C. The MS survey scan was m/z 300 to 1,500 with a scan time of 1 s and a interscan time of 0.1 s. When the intensity of a peak rose above a threshold of 10 counts, tandem mass spectra were acquired. Normalized collision energies for peptide fragmentation was set using the charge-state recognition files for +2 and +3 of the three more intense ion parents. The scan range for MS/MS acquisition was from m/z 50 to 1,500 with a scan time of 1 s and an interscan time of 0.1 s. MS/MS acquisition switched back to MS when threshold reached 2 or after 10 s of acquisition duration. Fragmentation was performed using argon as the collision gas and with a collision energy profile optimized for various mass ranges of ion precursors. Mass data collected during a LC-MS/MS analysis were processed and converted into a PKL file to be submitted to the Global server 1.1 and Mascot search engines. Global server 1.1 and Mascot searches were first performed against SwissProt Data Bank with a tolerance on mass measurement of 0.25 D in MS mode and 0.5 D in MS/MS mode without any pI and molecular mass restrictions, but variable modifications were taken into account, like Met oxidation. The peptide mass error was limited to 50 ppm. For confirmation, each spectra was loaded onto the Peptide Sequencing software (BioLynx, Micromass), and the sequences were reprocessed manually before being submitted to a Blast search (National Center for Biotechnology Information) without any taxonomy restriction. Most obtained sequences represent complete tryptic peptides. However, the sequences of some other peptides could only be partially determined by MS/MS.
Statistical analysis was carried out using SAS Release v8.0 (SAS Institute, Cary, NC). Coefficients of determination from regression analysis and results from analysis of variance are given according to their level of significance as ***, **, *, and + for P < 0.001, 0.01, 0.05, and 0.1, respectively. Different letters are significantly different at P < 0.05 (Tukey).
Upon request, all novel materials described in this publication will be made available in a time manner for noncommercial research purposes, subject to the requisite permission from any third-party owners of all or parts of the material. Obtaining any permissions will be the responsibility of the requestor.
We thank Holger Eubel for support and introduction to 2D electrophoresis techniques. Received June 26, 2003; returned for revision July 21, 2003; accepted August 27, 2003.
1 This work was supported by the Deutsche Forschungsgemeinschaft (Special Research Programme 717 "The apoplast of higher plants"). Article, publication date, and citation information can be found at www.plantphysiol.org/cgi/doi/10.1104/pp.103.029215. * Corresponding author; e-mail horst{at}pflern.uni-hannover.de; fax 49-511-762-3611.
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