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First published online July 30, 2004; 10.1104/pp.104.039537 Plant Physiology 135:1903-1907 (2004) © 2004 American Society of Plant Biologists 13C Labeling Reveals Chloroplastic and Extrachloroplastic Pools of Dimethylallyl Pyrophosphate and Their Contribution to Isoprene Formation1Istituto di Biologia Agroambientale e Forestale (F.L., P.P.) and Istituto di Metodologie Chimiche (E.B., P.C.), Consiglio Nazionale delle Ricerche, 00016 Monterotondo Scalo, Rome, Italy
Isoprene emitted from plants is made in chloroplasts from dimethylallyl pyrophosphate (DMAPP). Leaves of Populus nigra and Phragmites australis exposed to 13CO2 for 15 min emitted isoprene that was about 90% 13C, but DMAPP isolated from those leaves was only 28% and 36% 13C, respectively. The labeled DMAPP is likely to represent chloroplastic DMAPP contributing to isoprene emission. A substantial 13C labeling was also found in both emission and DMAPP pool of low-emitting, young leaves of Phragmites. This confirms that low emission of young leaves is not caused by absence of chloroplastic DMAPP but rather by enzyme characteristics. A very low 13C labeling was found in the DMAPP pool and in the residual isoprene emission of leaves previously fed with fosmidomycin to inhibit isoprene formation. This shows that fosmidomycin is a very effective inhibitor of the chloroplastic biosynthetic pathway of isoprene synthesis, that the residual isoprene is formed from extra-chloroplastic sources, and that chloroplastic and extrachloroplastic pathways are not cross-linked, at least following inhibition of the chloroplastic pathway. Refixation of unlabeled respiratory CO2 in the light may explain incomplete labeling of isoprene emission, as we found a good association between these two parameters.
Isoprene, the most important volatile organic compound in biosphere-atmosphere interaction (Fuentes et al., 2000
Dimethylallyl pyrophosphate (DMAPP), the last precursor of isoprene, is also formed by chloroplastic and extrachloroplastic sources of carbon, depending on its pathway of formation. To investigate the localization of DMAPP in isoprene-emitting leaves, the nonaqueous fractionation method (Sharkey and Vanderveer, 1989
In this paper we show the 13C labeling pattern of DMAPP from isoprene-emitting leaves and from leaves in which isoprene emission is naturally low because of their young age (Sharkey and Loreto, 1993
In Populus (Fig. 1) and Phragmites (Fig. 2) mature leaves, about 90% of the emitted isoprene was fully or partly labeled by 13C. Up to 20% 12C was still present in the labeled fraction of isoprene, as calculated from the percent distribution of labeling in partly labeled fragments (Fig. 5). In Populus, the residual emission after fosmidomycin feeding was virtually unlabeled by 13C, and this unlabeled fraction was not quantitatively different from the unlabeled fraction measured in isoprene-emitting leaves (compare second and third bars of Fig. 1).
In Phragmites, young leaves emitted a low amount of isoprene, and only 52% of this emission was labeled by 13C (Fig. 2). Only 26% and 38% of the DMAPP content was labeled by 13C in the mature leaves of Populus (Fig. 3) and Phragmites (Fig. 4), respectively. The labeling pattern was similar to that observed in emitted isoprene; that is, there were no differences in the distribution of 13C atoms in the molecule of isoprene evolved from DMAPP after acidic hydrolysis and in that emitted by leaves (Fig. 5).
The percentage of DMAPP labeling was not different in young leaves of Phragmites with respect to mature leaves (Fig. 4). In fosmidomycin-fed leaves, the 13C-labeled fraction of DMAPP became very low (Phragmites; Fig. 4) or absent (Populus; Fig. 3), while the unlabeled fraction quantitatively increased with respect to that measured in isoprene-emitting leaves. This increase was particularly relevant in Populus (Fig. 3). The remaining 12C in the labeled fraction of isoprene, expressed as unlabeled percent, was associated with the estimated percentage of refixed respiratory carbon (Fig. 6). Mitochondrial respiration in the dark was similar in the two plants, averaging 1.2 ± 0.3 µmol m2 s1 (n = 8; data not shown).
Rapid and quasitotal 13C labeling of isoprene emitted by Populus and Phragmites mature leaves (Figs. 1 and 2) confirmed that the largest part of the carbon incorporated in the molecule comes from photosynthetic metabolism, as already shown in many other plant species (Delwiche and Sharkey, 1993
As expected, fosmidomycin reduced isoprene emission of mature leaves to about one-tenth of the original emission (Loreto and Velikova, 2001
In young leaves of Phragmites, about 50% of the low isoprene emission remained unlabeled. Retrieval of a labeled fraction of isoprene indicates presence of chloroplastic sources, also confirmed by similar labeling of DMAPP (compare Figs. 2 and 4). The low emission of young leaves is therefore explained by the low activity (and/or concentration) of isoprene synthase in these leaf chloroplasts (Kuzma and Fall, 1993
DMAPP labeling was fast, and 13C was distributed within the molecule of DMAPP similarly to labeling of emitted isoprene (Fig. 5). This suggests that labeled DMAPP originated isoprene and was located in the chloroplasts. Less than one-third of the total pool of DMAPP extracted from our leaves was labeled by 13C (Figs. 3 and 4). This indicates that the chloroplastic pool of DMAPP is also about one-third of the total pool. This ratio is low compared to the ratio between chloroplastic and extrachloroplastic DMAPP (about 70% and 30%) reported by Rosenstiel et al. (2002)
Our experiment shows that 13C labeling of DMAPP is a very efficient, rapid, and elegant method to quantify the DMAPP chloroplastic pool, substantially less cumbersome than the only alternative of nonaqueous fractionation of leaf material. Extrachloroplastic (cytosolic, vacuolar) pools of DMAPP cannot be partitioned by 13C labeling, as they should remain unlabeled. However, if the vacuolar pool of DMAPP is absent or very low (Wolfertz et al., 2003
Data of Figure 3 show no 13C labeling of DMAPP in mature leaves previously fed with fosmidomycin, while the unlabeled fraction of DMAPP was quantitatively stimulated by the treatment, particularly in Populus. Suppression of the labeled pool of DMAPP by fosmidomycin indirectly confirmed that this pool is entirely of chloroplastic origin and feeds the chloroplastic pathway of isoprene formation. As already mentioned, Wolfertz et al. (2003) The labeled and unlabeled pools of DMAPP were lower in young leaves than in mature leaves, and the fractions of labeled and unlabeled DMAPP of young leaves were similar to those measured for emitted isoprene in the same leaves (Figs. 2 and 4). This is different from what has been reported for mature leaves. It may indicate that in young leaves the chloroplastic and extrachloroplastic DMAPP contribute equally to isoprene formation.
In conclusion, 13C labeling of DMAPP allowed us to distinguish, as in the case of isoprene labeling, between labeled (chloroplastic) and unlabeled (presumably cytosolic) pools. Labeling of DMAPP in young leaves showed the presence of the chloroplastic pool and indicated that the low emission was probably due to low isoprene synthase activity and/or concentration. Labeling of leaves after fosmidomycin-feeding confirmed the complete inhibition of the chloroplastic pathway of isoprene formation while it revealed stimulation of the extrachloroplastic pool for a still unknown mechanism. This stimulation apparently does not affect the emission, suggesting no cross-talk between the chloroplastic and extrachloroplastic pathways. Finally, application of the 13C technique to detect refixed CO2 supplied by mitochondrial respiration showed that refixation was associated to the level of the incomplete labeling of isoprene emission, suggesting that respiratory CO2 may be a primary source of unlabeled carbon for isoprene formation.
Plant Material, Growth Conditions, and Statistics Two-year-old plants of Populus nigra and current year plants of Phragmites australis were used. Plants were grown in 10-L pots filled with commercial soil under optimal water and nutrient conditions in phytotrons with a light regime of 14 h/d at 1,000 µmol photons m2 s1, and a temperature regime of 30°C/27°C (day/night). Experiments were carried out on mature leaves of Populus. In Phragmites, both mature (fully expanded) and young (just unfolded) leaves were used. Total isoprene emission and DMAPP content are shown in Figures 1 to 4 as mean ± SE of 4 measurements on different leaves of different plants. In the same figures, the labeled and unlabeled fractions of isoprene and DMAPP are shown as the mean, the SE of each fraction being <10% of the mean. The typical 13C labeling distribution in the molecules of isoprene and DMAPP is shown in a single measurement (Fig. 5). Single measurements of 13C-labeled isoprene emission are also compared with the calculated mitochondrial 12CO2 refixation in the same leaves (Fig. 6).
Single leaves were clamped in a 0.5-L gas-exchange plastic cuvette, entirely coated with Teflon, as previously explained (Loreto et al., 1996
Mitochondrial respiration in the light was measured by labeling all other sources of CO2 exchange (photosynthesis and photorespiration) in a 13CO2 atmosphere. Respiratory (12CO2) efflux was measured with a 13CO2-insensitive IRGA (Gashound; LI-COR). The fraction of respiratory CO2 refixed by leaves (Rdr) was estimated by
Isoprene was trapped in cartridges containing three different graphitic carbons (Brancaleoni et al., 1999
After measuring gas-exchanges, some mature leaves of Populus and Phragmites were cut and placed in a vial filled with distilled water. When photosynthesis and isoprene emission returned to a steady state, comparable to those observed before cutting, fosmidomycin was added to the water. The resulting aqueous solution of fosmidomycin (5 µM) was taken up by leaves within 30 min (data not shown), as indicated by the strong and irreversible inhibition of isoprene emission, while photosynthesis was not affected.
Labeling measurements of isoprene emission and DMAPP content were carried out in mature, isoprene-emitting leaves, in the same mature leaves but after inhibiting isoprene formation by fosmidomycin, and in young, low-isoprene emitting Phragmites leaves. When photosynthesis and isoprene emission were steady (about 30 min after inserting leaves in the cuvette, or 1 h after feeding fosmidomycin), the CO2 source (a flask containing synthetic air with a natural abundance of 13CO2) was replaced with a flask containing synthetic air with only 13C labeled CO2. The system used in this experiment is described in all details by Loreto et al. (1996)
At the end of each experiment, leaves were removed from the cuvette and rapidly frozen in liquid nitrogen and the amount of DMAPP contained in the leaf was derived by measuring the isoprene formed after acidic hydrolysis on leaf extract maintained with H2SO4 8 M for 1 h at 30°C (Fisher et al., 2001
Giorgio Alessio, Domenico Tricoli, and Violeta Velikova helped with gas-exchange and labeling measurements, and Massimiliano Frattoni helped with mass-spectrometric measurements. Received January 21, 2004; returned for revision March 1, 2004; accepted March 21, 2004.
1 This work was supported by the European Commission project, Ecological and Physiological Functions of Biogenic Isoprenoids and Their Impact on the Environment (contract MCRTNCTMCRTNCT2003504720, "ISONET") and by the European Science Foundation program, Volatile Organic Compounds in the Biosphere-Atmosphere System (VOCBAS). Article, publication date, and citation information can be found at www.plantphysiol.org/cgi/doi/10.1104/pp.104.039537. * Corresponding author; e-mail francesco.loreto{at}ibaf.cnr.it; fax 069064492.
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