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First published online July 30, 2004; 10.1104/pp.104.043737 Plant Physiology 135:1939-1945 (2004) © 2004 American Society of Plant Biologists Rapid Regulation of the Methylerythritol 4-Phosphate Pathway during Isoprene Synthesis1Institut für Angewandte Physik, Universität Bonn, D53115 Bonn, Germany (M.W., F.K.); Department of Botany, University of Wisconsin, Madison, Wisconsin 53706 (T.D.S.); and Max-Planck-Institut für Chemische Ökologie, D07745 Jena, Germany (W.B.)
More volatile organic carbon is lost from plants as isoprene than any other molecule. This flux of carbon to the atmosphere affects atmospheric chemistry and can serve as a substrate for ozone production in polluted air. Isoprene synthesis may help leaves cope with heatflecks and active oxygen species. Isoprene synthase, an enzyme related to monoterpene synthases, converts dimethylallyl diphosphate derived from the methylerythritol 4-phosphate pathway to isoprene. We used dideuterated deoxyxylulose (DOX-d2) to study the regulation of the isoprene biosynthetic pathway. Exogenous DOX-d2 displaced endogenous sources of carbon for isoprene synthesis without increasing the overall rate of isoprene synthesis. However, at higher concentrations, DOX-d2 completely suppressed isoprene synthesis from endogenous sources and increased the overall rate of isoprene synthesis. We interpret these results to indicate strong feedback control of deoxyxylulose-5-phosphate synthase. We related the emission of labeled isoprene to the concentration of labeled dimethylallyl diphosphate in order to estimate the in situ Km of isoprene synthase. The results confirm that isoprene synthase has a Km 10- to 100-fold higher for its allylic diphosphate substrate than related monoterpene synthases for geranyl diphosphate.
Isoprene is emitted from many plants, including mosses, ferns, gymnosperms, and angiosperms (Kesselmeier and Staudt, 1999
Isoprene is made mostly from carbon previously fixed by photosynthesis (Delwiche and Sharkey, 1993
The flux of carbon through the MEP pathway required for isoprene synthesis far exceeds that required for other purposes, such as carotenoid synthesis (Sharkey et al., 1991
The first intermediate of the MEP pathway is deoxyxylulose 5-phosphate (DXP). The nonphosphorylated, free deoxyxylulose obtained according to Jux and Boland (1999) can be fed to leaves and is rapidly incorporated into the products of the MEP pathway (Arigoni et al., 1997 DOX-d2 was used to investigate properties of isoprene synthase, especially the affinity of isoprene synthase for its substrate DMAPP. In addition, we studied the regulation of the MEP pathway and its ability to supply a regulated amount of DMAPP for isoprene synthesis during and after heatflecks.
Effect of Feeding DOX-d2 Feeding DOX-d2 (2.94 mM) caused the emitted isoprene to become labeled with deuterium (Fig. 1). The first deuterium-labeled isoprene was emitted approximately 10 to 15 min after the onset of feeding, and the degree of labeling increased continuously over the next 2 h until a rather constant level was reached (Fig. 1). When the DOX-d2 solution was replaced with water, the degree of deuterium labeling of isoprene decreased after about 20 min and was further reduced to low levels in about 2 h (Fig. 1). The addition of DOX-d2 did not significantly affect the total (labeled plus unlabeled) rate of isoprene emission. The deuterium-labeled isoprene displaced unlabeled isoprene, but the total emission rate of isoprene remained fairly constant even as the source of precursors was changed from primarily endogenous (unlabeled) to primarily exogenous (deuterium labeled) and back again. Photosynthesis was largely unaffected by administration of 2.94 mM DOX-d2.
In most experiments, feeding 2.94 mM DOX-d2 resulted in half or more of the emitted isoprene to be labeled. The average proportion after 90 min of feeding was 56 ± 5% (average ± SE, n = 8). The total isoprene emission rate (labeled plus unlabeled) 90 min after feeding was 108 ± 11% (average ± SE, n = 8) of the rate observed before feeding. At higher concentration (36.25 mM) DOX-d2, isoprene became completely labeled within 45 min (Fig. 2). In addition, the total rate of isoprene emission increased while photosynthesis was decreased. The relatively high SE of the isoprene emission rates reflects leaf-to-leaf variation. The rate of isoprene emission from DOX-d2 was 35% ± 10% (average ± SE, n = 3) more than the total isoprene emission before feeding, and the increase occurred in all three trials. The inhibition of photosynthesis was always less than the inhibition of unlabeled isoprene (Fig. 3).
Chloroplast Levels of DMAPP-d2 We hypothesize that DOX-d2 is converted to DMAPP-d2 inside the chloroplast and that no DMAPP-d2 derived from DOX-d2 occurs in the cytosol. Attempts to feed DMAPP-d2 were unsuccessful, as expected. This confirms that the C5-diphosphates do not cross membranes to reach the chloroplasts in sufficient amounts to be detected by isoprene emission. In addition, we note that one of the xylulose kinases in the Arabidopsis genome is predicted to have a transit sequence. Therefore, all DMAPP-d2 derived from the exogenous precursor should be in the chloroplast, although the cytosol has substantial amounts of DMAPP resulting from the MVA pathway. By measuring the DMAPP-d2 we could relate isoprene-d2 emission to its substrate independent of the cytosolic DMAPP.
The rate of emission of isoprene-d2 was correlated with the amount of DMAPP-d2 measured in the leaf (Fig. 4). Using a Hanes-Wolff plot, we calculated a Km of 139 nmol g1 fresh weight and Vmax of 71 nmol m2 s1. To relate the Km to a concentration, the plastid volume of Eucalyptus globulus was assumed to be about 15% of the leaf fresh weight (i.e. 0.15 mL/g fresh weight) and the leaves about 90% liquid volume (based on data from Winter et al. [1993
If the Eucalyptus leaves had a higher dry weight to fresh weight ratio compared with spinach and barley, then the Km would be higher, thus this calculation is conservative and likely underestimates the Km.
Leaves emitting roughly equal amounts of labeled and unlabeled isoprene at 30°C were heated to leaf temperatures between 45°C and 50°C. In Figure 5A, a representative example with the rate and extent of heating is shown. Initially, the total isoprene emission rate increased substantially, but the majority of the increased emission was derived from endogenous sources (i.e. was unlabeled; Fig. 5). Photosynthesis was eventually inhibited by the heat treatment and did not recover immediately after returning the leaf temperature to 30°C. Following the heat treatment, the total rate of isoprene emission was severely depressed. DOX-d2-dependent isoprene emission decreased immediately after the heatfleck but recovered beyond prestress levels within 2 h, while the isoprene derived from endogenous sources decreased to zero after the heatfleck and did not significantly increase after photosynthesis began to recover 2 h later (Fig. 5). For the experiment shown in Figure 5 (one of three), endogenous isoprene production was 19.8 nmol m2 s1 and isoprene-d2 production was 15.9 nmol m2 s1 at 30°C prior to the heatfleck (time 291 min).
Pathways of Isoprene Synthesis
Isoprene can be made from endogenous carbon sources, especially from the Calvin cycle (Sharkey and Yeh, 2001
High concentrations of DOX (>3 mM) caused an inhibition of photosynthesis. This could be related to imbalance in phosphate inside the chloroplast as the DOX became phosphorylated since low levels of phosphate can occur when phosphorylation substrates are fed to leaves (Sharkey and Vanderveer, 1989
To determine the in vivo Km for isoprene synthesis, we assayed DMAPP-d2 and assumed that this entire compound was in the plastid compartment. A significant amount of the total DMAPP in leaves is outside of chloroplasts (Rosenstiel et al., 2002
The estimated Km was 0.97 mM and may have been higher. This is an indirect measure that may have more uncertainty than in vitro measurements, but this estimate is important because it reflects the enzyme kinetics in situ. We did not measure the Km directly in this work, but our estimated in vivo Km corresponds very well with the high in vitro estimates of the Km of isoprene synthase (Silver and Fall, 1995
Using DOX-d2 we were able to examine the regulation of the early steps of the isoprene biosynthetic pathway. When 2.9 (e.g. Fig. 1) or 7.5 mM (data not shown) DOX-d2 was fed, the exogenous DXP displaced the endogenous supply, but the overall rate of isoprene emission remained constant and presumably so did the concentrations of DMAPP and DXP in the plastid. This could be achieved by a negative feedback loop from DXP, DMAPP, or other intermediates of the pathway modulating the activity of DXP synthase (DXS) to keep the supply of DMAPP constant. If the regulation of the rate of DMAPP synthesis would be localized downstream of DXP, we would not expect exogenous DXP (from administration of DOX-d2) to displace the endogenous source of DMAPP precursors. The fact that the overall rate of isoprene emission changed very little until the endogenous isoprene was reduced nearly to zero indicates that the feedback loop is very effective. Very high levels of DOX-d2 can overcome the regulation.
When leaves were heated, isoprene synthase, known to be highly temperature dependent (Monson et al., 1992 The hypothesized regulation of the MEP pathway in response to the various treatments is summarized in Table I. Assuming a high gain feedback loop, we make the following interpretations. When 2.94 mM DOX-d2 is fed to leaves, the rate of arrival and conversion to DXP is less than the rate of use of DXP, and DXS is perfectly regulated to compensate for the exogenous carbon source, keeping the DXP and DMAPP concentrations constant (and, therefore, isoprene emission rate stays constant). When 36.25 mM DOX is fed, the exogenous source exceeds the steady-state consumption, and so even with essentially no endogenous production of DXP, the DMAPP concentration increases, resulting in an increase in the rate of isoprene emission. This could only occur if the steady-state rate of DMAPP was not substantially above the Km of isoprene synthase for DMAPP. From the discussion above, we believe that the very high Kms (in the millimolar range) reported for the isolated enzyme also are true for the enzyme in situ, making it possible for exogenous DOX to increase the rate of isoprene emission by increasing the concentration of DMAPP.
In earlier work, we found that high emission rates of isoprene were correlated with low chloroplastic pools of DMAPP (Wolfertz et al., 2003
Plant Culture Leaves were taken from a Eucalyptus globulus tree kept in a greenhouse of the Institute of Plant Pathology at the University of Bonn. During summer, the tree stood outside in the garden of the institute. Leaves were cut under water and held in water for the whole measurements. Measurements were done between July and September 2003.
Gas exchange measurements were carried out as described in Kühnemann et al. (2002)
For determining the DMAPP amount, we used the method of Fisher et al. (2001) Received March 29, 2004; returned for revision May 25, 2004; accepted May 26, 2004.
1 This work was supported by the University of Wisconsin-Madison/University of Bonn Exchange program and by the U.S. National Science Foundation (grant no. IBN0212204). Article, publication date, and citation information can be found at www.plantphysiol.org/cgi/doi/10.1104/pp.104.043737. * Corresponding author; e-mail tsharkey{at}wisc.edu; fax 6082627509.
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