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Plant Physiology 136:3877-3883 (2004) © 2004 American Society of Plant Biologists Cytoskeletal Motors in Arabidopsis. Sixty-One Kinesins and Seventeen Myosins1Section of Plant Biology, University of California, Davis, California 95616
Cytoskeletal motor proteins are ATPases that use the energy released from ATP hydrolysis to move along the cytoskeletal elements of microtubules and actin microfilaments. Found among all eukaryotic organisms, kinesins are microtubule-based motor proteins with a conserved kinesin motor domain, and myosins are actin microfilament-based motor proteins with a conserved myosin motor domain. Cytoskeletal motor proteins directly contribute to the organization of various cytoskeletal arrays during cell division and cell growth in plant tissues. They are also responsible for the motility of molecules and organelles, and the segregation of genetic materials during mitosis and meiosis. In the genome of the model plant Arabidopsis (Arabidopsis thaliana), there are at least 61 genes encoding kinesins and 17 genes encoding myosins. Most Arabidopsis kinesins and all myosins are evolutionarily divergent from their counterparts in animals and fungi. Little is known about the functions of most plant kinesins and myosins. Arabidopsis kinesins form a number of subfamilies. The mitotic kinesins in the BIMC/Kinesin-5 and the NCD/Kinesin-14 subfamilies appear to be similar to those in fungi and animals. Others, however, are very divergent, as their nonmotor sequences are unique to plants. Some of Arabidopsis kinesins are associated with microtubules, mitochondria, Golgi stacks, and vesicles. They affect microtubule organization, organelle distribution, and vesicle transport, respectively. Ultimately, Arabidopsis kinesins contribute directly or indirectly to cell division and cell growth in various tissues. Arabidopsis myosins are classified into two subfamilies: class VIII and class XI. The class XI myosins are associated with various organelles/vesicles. Functions of Arabidopsis myosins are still elusive. Future efforts will be devoted to deciphering not only the functions of these motors by molecular genetics but also the molecular mechanisms underlying how these roles are played.
Cytoskeletal motors use the energy released from ATP hydrolysis to move unidirectionally along tracks of microtubules and actin microfilaments. To date, cytoskeletal motors have been found in all studied eukaryotic organisms. Common structural features of cytoskeletal motors have been vividly depicted in a recent review article (Vale, 2003
Members of the kinesin superfamily are one of the two families of microtubule-based motors that share a catalytic core of about 350 amino acids containing an ATP-binding site and a microtubule-binding site. The catalytic core is often juxtaposed with an
Kinesins are grouped into more than a dozen subfamilies by phylogenetic analyses of their motor domains (Schoch et al., 2003
Kinesins transport various vesicles and organelles along microtubules in different cell types of a wide range of organisms (Vale, 2003 A kinesin Web site has been launched to summarize the knowledge from the discovery of kinesins to the latest findings (http://www.proweb.org/kinesin/).
Myosins are motors that travel along actin microfilaments. To date, members of the myosin superfamily are classified into at least 18 subfamilies (Berg et al., 2001 A Web site has been designated for myosins: http://www.mrc-lmb.cam.ac.uk/myosin/myosin.html (U.S. version: http://www.proweb.org/myosin/index.html).
Compared to what has been known on animal and fungal cytoskeletal motors, we know much less about their counterparts in angiosperms. This difference is largely because there are only a few laboratories that study plant motors. A recent comprehensive review article is devoted to summarizing early findings of plant cytoskeletal motors (Reddy, 2001
The completed Arabidopsis genome contains at least 61 genes encoding polypeptides with the kinesin catalytic core (Reddy and Day, 2001b To date, kinesins identified from angiosperms other than Arabidopsis all have homologs in this small model plant. In this Update article, we summarize recent findings on Arabidopsis kinesins from in vitro and/or in vivo studies. A few examples were brought in from other angiosperms because their Arabidopsis homologs have not been studied yet.
Although the conventional kinesin and most other kinesins are microtubule plus end-directed motors, a number of C-terminal motor kinesins do the opposite (Ovechkina and Wordeman, 2003
Based on the presence of the signature neck sequence, there are 21 Arabidopsis genes encoding minus end-directed kinesins (Reddy and Day, 2001b
KATA/ATK1 and Close Relatives
The Arabidopsis KATA/ATK1 protein plays a critical role in microtubule organization at the spindle pole and the spindle midzone during meiosis, and loss-of-function mutations consequently cause abnormal chromosome segregation during microsporogenesis (Chen et al., 2002
The Calmodulin-Binding KCBP/ZWI Kinesin
The search for KCBP/ZWI-interacting proteins has revealed several novel ones (Day et al., 2000
The Actin-Binding KCH Kinesins
The presence of a CH domain in a kinesin is intriguing as it is typically found in actin-binding proteins like calponin and fimbrin (Gimona et al., 2002
Other Minus End-Directed Kinesins
The AtFRA1 kinesin, which belongs to the Kinesin-4 or KIF4/chromokinesin subfamily, was identified by an elegant screen for fragile fiber mutants (Zhong et al., 2002
Arabidopsis has two kinesins, AtKinesin-13A (At3g16630) and AtKinesin-13B (At3g16060) that belong to the Kinesin-13 subfamily (Reddy and Day, 2001b
Animal internal motor kinesins in the Kinesin-13 subfamily are not motors. Instead, they are microtubule depolymerases activated by microtubule end binding (Walczak, 2003
Four Arabidopsis genes, At2g28620, At2g36200, At2g37420, and 3g45850, encode kinesins in the BIMC/Kinesin-5 subfamily (Reddy and Day, 2001b
Plant cytokinesis is mechanistically different from that in animals and fungi (Mayer and Jurgens, 2004
AtNACK1/HIK Kinesins and a MAP Kinase Cascade
NACK1 appears to be required for cell-plate expansion after cytokinesis has been initiated (Nishihama et al., 2002
The AtTES/NACK2 kinesin, similar to AtNACK1/HIK, however, is not required for vegetative cytokinesis (Yang et al., 2003
AtPAKRP1/AtKinesin-12A and Similar Kinesins
Kinesins for Delivering Golgi-Derived Vesicles Another phragmoplast-associated kinesin, AtPAKRP2, is specifically associated with Golgi-derived vesicles in the phragmoplast (Lee et al., 2001 There is no doubt that the list of kinesins required for cytokinesis is going to grow in the near future. Plant cytokinesis requires concerted forces generated by different kinesins present in the phragmoplast.
The above discussion has only covered a fraction of Arabidopsis kinesins. There are others of which we know very little or nothing about their structure and function. For example, two N-terminal motor kinesins contain a mitochondria-targeting peptide that would allow them to be associated with the organelle (Itoh et al., 2001
The Arabidopsis myosin gene family is much simpler compared to its kinesin family (Reddy and Day, 2001a
Myosin XI is probably more abundantly expressed in cells than Myosin VIII. Biochemically purified plant myosins with molecular mass at 165 to 175 kD turn out to be class XI myosins (Ma and Yen, 1989
A tobacco 175-kD myosin, probably the homolog of MYA1, demonstrates a high processive velocity of 7 µm/s at 35 nm steps, probably the fastest among known processive myosins (Tominaga et al., 2003
One of the questions about these 13 Myosin XIs is whether each one interacts with a particular organelle or structure. Immunolocalization studies indicate that Myosin XI is associated with particles of various sizes in tobacco pollen tubes and suspension cells (Yokota et al., 1995
Functions of MYA2 have been further investigated using an Arabidopsis T-DNA insertional mutant (Holweg and Nick, 2004
Current knowledge indicates that most kinesins and myosins of Arabidopsis and other plants are very different motors from those in other kingdoms. This is reflected by the sequence divergence in the motor domains, and more significantly by novel sequences in the nonmotor regions whose significance is largely unknown. What we have learned about plant cytoskeletal motors is probably just the tip of the iceberg. The tail sequences suggest that many tales of these Arabidopsis cytoskeletal motors are yet to be told. One of the frequently asked questions is why a small plant like Arabidopsis needs so many kinesins and myosins. Our answer is that besides bearing various cell types like guard cells, trichomes, pollen tubes, root hairs, and different vascular cells that may require different motors for their morphogenesis, land plants also need to meet many environmental challenges, as they cannot run away from them. Some cytoskeletal motors might participate in defense responses when a plant is challenged by environmental stresses or pathogen attacks. We believe that in the next few years we will need to address a number of issues about these motors. The first task is to determine the intracellular localization patterns of each motor. The next demanding job is to find out the proteins they interact with. It will help us figure out what their cargoes are. Then we will need to find out when and how the motors are activated, and where their destinations are. Genetic studies are needed to address the functions of these motors. We would also like to suggest that activities of these motors are probably coordinated at a certain stage in a given cell. There must be some mechanisms for coordination between kinesins and myosins and between microtubules and actin microfilaments in plant cells. Received September 2, 2004; returned for revision October 28, 2004; accepted November 1, 2004.
1 This work was supported by grants from the U.S. Department of Energy, Division of Energy Biosciences, and by the U.S. Department of Agriculture, Cooperative State Research, Education, and Extension Service. www.plantphysiol.org/cgi/doi/10.1104/pp.104.052621. * Corresponding author; email bliu{at}ucdavis.edu; fax 5307525410.
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