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First published online October 11, 2007; 10.1104/pp.107.102582 Plant Physiology 145:1444-1459 (2007) © 2007 American Society of Plant Biologists OPEN ACCESS ARTICLE
Maize Brittle stalk2 Encodes a COBRA-Like Protein Expressed in Early Organ Development But Required for Tissue Flexibility at Maturity1,[C],[OA]Department of Botany and Plant Pathology (A.S., A.O., N.C.C., G.J.) and Department of Biological Sciences (T.L., M.C.C.), Purdue University, West Lafayette, Indiana 47907–2054; Department of Agronomy, University of Missouri, Columbia, Missouri 65211 (D.S.M.); and University of Florida Genetics Institute and Agronomy Department, Gainesville, Florida 32610 (W.V.)
The maize (Zea mays) brittle stalk2 (bk2) is a recessive mutant, the aerial parts of which are easily broken. The bk2 phenotype is developmentally regulated and appears 4 weeks after planting, at about the fifth-leaf stage. Before this time, mutants are indistinguishable from wild-type siblings. Afterward, all organs of the bk2 mutants turn brittle, even the preexisting ones, and they remain brittle throughout the life of the plant. Leaf tension assays and bend tests of the internodes show that the brittle phenotype does not result from loss of tensile strength but from loss in flexibility that causes the tissues to snap instead of bend. The Bk2 gene was cloned by a combination of transposon tagging and a candidate gene approach and found to encode a COBRA-like protein similar to rice (Oryza sativa) BC1 and Arabidopsis (Arabidopsis thaliana) COBRA-LIKE4. The outer periphery of the stalk has fewer vascular bundles, and the sclerids underlying the epidermis possess thinner secondary walls. Relative cellulose content is not strictly correlated with the brittle phenotype. Cellulose content in mature zones of bk2 mature stems is lowered by 40% but is about the same as wild type in developing stems. Although relative cellulose content is lowered in leaves after the onset of the brittle phenotype, total wall mass as a proportion of dry mass is either unchanged or slightly increased, indicating a compensatory increase in noncellulosic carbohydrate mass. Fourier transform infrared spectra indicated an increase in phenolic ester content in the walls of bk2 leaves and stems. Total content of lignin is unaffected in bk2 juvenile leaves before or after appearance of the brittle phenotype, but bk2 mature and developing stems are markedly enriched in lignin compared to wild-type stems. Despite increased lignin in bk2 stems, loss of staining with phloroglucinol and ultraviolet autofluorescence is observed in vascular bundles and sclerid layers. Consistent with the infrared analyses, levels of saponifiable hydroxycinnamates are elevated in bk2 leaves and stems. As Bk2 is highly expressed during early development, well before the onset of the brittle phenotype, we propose that Bk2 functions in a patterning of lignin-cellulosic interactions that maintain organ flexibility rather than having a direct role in cellulose biosynthesis.
In the type II cell walls of cereals and other commelinoid monocots, cellulose microfibrils are cross-linked mostly with glucuronoarabinoxylans and mixed-linkage β-glucans, and a strong phenylpropanoid network develops after cells stop growing (Carpita, 1996
Although mutants in cell wall-related genes are valuable materials to address the functions of cell wall polymers and their interactions, very few cell wall mutants have been characterized for the grasses (Yong et al., 2005
To understand the molecular basis of the brittle phenotype, we cloned the Bk2 gene and characterized cell structure and cell wall composition in the bk2 mutant. The Bk2 gene is orthologous to the rice Bc1 gene, a member of the COBRA gene family that encodes glycosylphosphatidylinositol (GPI)-anchored proteins of unknown function (Schindelman et al., 2001
Because cobl mutants have decreased cellulose contents, COBL proteins are thought to be involved in cellulose synthesis or its regulation (Kokubo et al., 1991
Consistent with the reports by Li et al. (2003)
Phenotypic Characteristics of bk2 In the uniform backcross progeny that we generated, the mutant bk2 and wild-type siblings segregated in a 1:1 ratio, indicating that the recessive bk2 allele transmits normally through both the male and female gametophytes. In this progeny, the mutant (bk2/bk2 homozygotes) and wild-type siblings (bk2/+ heterozygotes) were indistinguishable in all aspects of growth, development, and vigor, except that the bk2 mutants were brittle and broke readily (Fig. 1A ). All of the plant organs are brittle, including leaves, the ear, the tassel, and brace roots, as well as the stems. Field-grown mutants have to be staked as even a slight wind gust causes bk2 to snap at the lower internodes (Fig. 1B).
A unique characteristic of the maize bk2 mutant that distinguishes it from brittle mutants of other plant species is that its phenotype is developmentally programmed. During early germination and growth, the mutants are indistinguishable from wild-type siblings for the first 4 weeks after planting. Afterward, all organs of the bk2 mutants turn brittle, even the preexisting ones, and they remain brittle throughout the life of the plant.
To determine if the brittleness of bk2 mutants arises from changes in cell shape, size, or structure, we compared internode stem cells of bk2 with those of their wild-type siblings using bright-field and scanning electron microscopies. Sections derived from the first, third, and fourth internodes (counted from the bottom) of the greenhouse-grown mutant and wild-type siblings were used for these comparisons. While the wild-type stems produce secondary vascular bundles in the rind region of their lower internodes at maturity, the mutant stems do not (Fig. 2, A and B ). As a result, the density of peripheral vascular bundles in bk2 stems is only 1.7 ± 0.2 per mm compared to 3.5 ± 0.4 per mm in wild-type internodes, even though there is little difference in stem circumference. The total number of peripheral bundles was almost halved, with an average of 37 for bk2 and 72 for wild type. The density of peripheral bundles was slightly reduced in the third internode of bk2, 2.4 ± 0.3 per mm versus 2.9 ± 0.2 per mm, with total peripheral bundles of 53 for bk2 and 84 for wild type. Although most cells in the rind region had slightly thinner walls in the mutant compared to the wild type, the difference was more conspicuous in the walls of sclerenchyma underlying the epidermis and surrounding the vascular bundles (Fig. 2, C–H). Whereas the thinner bk2 sclerenchyma walls are homogeneous in appearance, those of the wild type show separation of primary and secondary wall. There are relatively more cells in bk2 stem cortex between the epidermis and the outer ring of vascular bundles than in those of wild type. The lowermost internodes tend to form a continuous layer of sclerids between the outermost ring of vascular bundles in wild-type plants but not in bk2 mutants. Taken together, these observations indicate that the bk2 mutation results in developmental alterations in the structure and anatomy of the maize stalk.
Tagging of Bk2
We tagged the Bk2 gene using a directed mutagenesis approach involving Mutator (Mu; Multani et al., 2003
As we were identifying the tagged bk2 gene by standard cosegregation analyses (Multani et al., 2003
Primers were designed from the ZmBc1 sequence and used to clone a part of the gene by PCR. A radiolabeled probe derived from this amplicon was hybridized to the same blots used earlier to map bk2 using RFLP markers (Fig. 3A
). No recombinants were found between ZmBc1 and the bk2 brittle phenotype, suggesting that the two were closely linked. To address whether the bk2 phenotype results from a mutation in ZmBc1, we took advantage of the bk2-Mu1 mutant allele. DNA isolated from this mutant was subjected to a reverse-genetics PCR-amplification test to assess if it was caused by insertion of a Mu element. Using the genomic ZmBc1 sequence as a guide, several primers were designed from the gene (Fig. 3B). We especially targeted the 5' end of the gene for primers because Mu elements are known to insert preferentially in this gene region (May et al., 2003
To show that the maize bk2 and the rice bc1 are orthologs, we demonstrated that the original mutant allele (br2-ref) also has a structural aberration that would disrupt the function of ZmBc1. Primers were designed across the ZmBc1 gene sequence and used in different combinations to amplify various parts of the gene by PCR. These reactions resulted in the identification of a region within the ZmBc1 gene of the bk2-ref mutant allele that failed to amplify repeatedly under normal PCR conditions. To address the possibility of an insertion in this region, a long-range PCR reaction was used that led to an amplification of a product that was about 1 kb larger than the product from B73 genomic DNA. Sequencing of this PCR product revealed the presence of a 1,085 bp novel insertion within the second exon of ZmBc1 in the bk2-ref allele (Fig. 3C), thereby confirming a structural and functional relationship between the maize Bk2 and the rice Bc1 genes.
The coding region of the Bk2 gene (ZmBc1) is 1,353 bp long and its predicted product has 84% and 70% identity with the rice BC1 and Arabidopsis COBL4 proteins, respectively (Fig. 4
). In addition, the maize Bk2 and rice Bc1 genes comprise three exons with identical exon/intron boundaries. The predicted BK2 protein is 450 amino acids long in contrast to the 468 amino acids of BC1. BK2 and BC1 differ from each other substantially in the N-terminal signal peptide and the hydrophobic C-terminal sequence, the latter of which is predicted to be clipped at the
Insertion in the bk2-ref Allele Uncovers a New and Unusual Family of Transposons
The insertion in bk2-ref reveals a new family of transposons with at least two unusual characteristics. First, they have an imperfect TIR of 46 bp, of which only the outermost 7 bp exhibit a perfect match between the left and the right borders (Fig. 3D). Second, they cause a 10-bp duplication at the site of insertion, another novelty among the transposable elements identified thus far in plants. However, Ching et al. (2006)
Sections of wild-type and bk2 leaves were tested for break strength. Thin sections of leaves taken parallel to the vascular tissue broke at a force about twice that of leaf sections made perpendicularly, but the average breaking strengths of wild type and bk2 were indistinguishable (Fig. 5A
). Similarly, the strain profiles in a one-point bend test of internodes of wild type and bk2 were indistinguishable. Whereas the wild type only bent upon increasing stress, the bk2 internodes snapped at variable points beyond the maximum stress exerted (Fig. 5B). These results contrast with those of Ching et al. (2006)
bk2 Exhibits Abnormalities in Cell Wall and Cellulose Deposition in Leaves and Mature Stem We characterized cellulose and noncellulosic monosaccharide distributions in the leaf and internode walls of bk2 and wild-type plants at stages before and after the brittle phenotype developed. Leaf and internode tissues were pulverized in liquid nitrogen, portions were freeze-dried directly to give total dry mass of the tissue, and cell walls were isolated from the remaining material. Relative cellulose content could be quantified as a proportion of the total dry mass and total cell wall mass (Fig. 6, A and B ). Before the appearance of the brittle phenotype, only the juvenile leaves are present and little difference in proportions of wall mass or cellulose content were observed (data not shown). After the appearance of the phenotype, wild-type cellulose mass represents 13% to 17% of the total dry mass of the juvenile and adult leaves and 13% to 19% of the dry mass of the stem, and in each tissue the reduction in cellulose is more drastic with increased maturity of the tissues (Fig. 6A). In contrast, the proportions of the cell wall mass per total dry mass were greater in bk2 than in wild type (Fig. 6A). The proportion of cell wall cellulose varied from 31% to 39% in wild-type leaves and 23% to 33% in bk2 leaves (Fig. 6B). However, while bk2 exhibited a stark cellulose deficiency in the mature stem, the percentage cellulose in the cell walls of bk2 developing stems was slightly greater than that of wild type.
Hydrolysis of isolated walls with 2 M trifluoroacetic acid (TFA) gives an insoluble residue, which is mostly cellulose, and soluble monosaccharides from noncellulosic polysaccharides. The monosaccharides, quantified by separation as alditol acetates, give an estimate of the relative abundance of the major wall constituents. With increasing maturity of leaves, Xyl content was higher in proportion relative to all other monosaccharides and with a slight increase in Xyl at the expense of Glc in bk2 leaves relative to wild type after the brittle phenotype develops (Fig. 7, A and B ). These results indicate that the increase in relative wall mass to dry mass (Fig. 6A) involves an increased synthesis of xylans.
Analysis of Secondary Wall Architecture by Fourier Transform Infrared Spectroscopy
Using scanning electron microscopy, we observed specific decreases in secondary wall thickness in sclerids of the rind and surrounding vascular bundles in the bk2 stem (Fig. 2, G and H). We used Fourier transform infrared (FTIR) microspectroscopy to assess wall phenotypes in isolated cell walls from juvenile and adult leaves, and from sclerid-enriched fragments of the rind of mature and developing internodes. FTIR spectroscopy is a vibrational spectroscopic method that can quantitatively detect, without derivatization, the relative amounts of functional groups, including carboxylate esters, phenolic esters, amides and carboxylic acids, and a carbohydrate fingerprint region, with absorbances at certain wave number serving as diagnostic of cellulose, cross-linking glycans, and pectins in maize and other grasses (Tsuboi, 1957
Principal components analysis applied to populations of spectra taken from isolated walls of wild-type and bk2 mature basal internodes showed that over 90% discrimination could be obtained using only three PCs (Fig. 9, A and B ). The wild-type population was enriched in PC1, the loading for which has absorbances of 1,034, 1,057, 1,108, and 1,157 cm–1, characteristic of cellulose. In contrast, the walls of bk2 mature internodes had higher PC3 scores, the loading for which has absorbances at 1,728 to 1,732 cm–1 and 1,234 to 1,242 cm–1, which are characteristic of phenolic esters. A similar PC1 loading was obtained when spectra from cell walls of bk2 juvenile and immature internodes of were compared to those of wild type, but PC1 scores did not contribute to discrimination of the two populations (under 60% correct assignment using PC1 for either group). However, spectra derived from walls of bk2 immature stems and juvenile leaves were significantly discriminated from wild type by PC3, for which loading 3 demonstrates an enrichment in phenolic esters in bk2 (Fig. 9, D and F). Whereas discrimination of bk2 and wild-type cell walls of the internodes and juvenile leaves was nearly 80% using three PCs, the spectra from cell walls of adult leaves were poorly discriminated. However, marked increases in discrimination of the walls of adult leaves were achieved using up to five PCs, with PC loading 5 having absorbances at 1,728 and 1,238 cm–1 associated with an enrichment of phenolic esters in the bk2 (Fig. 9H).
Qualitative and Quantitative Changes in Lignin and Hydroxycinnamic Acids
Whereas the relative proportion of Klason lignin in juvenile leaves is essentially unchanged before or after the appearance of the brittle phenotype, lignin was markedly enriched in the cell walls of bk2 mature and developing stems (Fig. 10
). Despite this enrichment in total content, there is significantly less phloroglucinol-staining material in the mutant stem slices and sections compared to those derived from wild-type siblings (Fig. 11, A–C
). This staining difference is only detected in the mature stems, as developing stems of both bk2 and wild-type tissues do not stain. Consistent with these results, we found that cell walls of mature bk2 stems were less autofluorescent than wild type when viewed under UV light (Fig. 11, D and E). These results are consistent with enhanced levels of Klason lignin observed in rice bc1 but differ in the Wiesner (phloroglucinol)-staining behavior (Li et al., 2003
Comparison of normalized mass spectral data obtained after pyrolysis of isolated cell wall material from the developing internode indicated that the chemical composition of mutant and wild type were similar (Table II ). Based on the increase in the intensity of mass-to-charge ratio (m/z) 73, 85, and 114, bk2 contains slightly more pentose-based polysaccharides (arabinoxylans) but the content of cellulose is unchanged (m/z 126, 144). The mutant contains less total pCA (m/z 164, 147) but a higher amount of FA (m/z 194). In contrast, the cell walls of mature stems of the bk2 mutant contain more lignin and more pCA and FA, confirming the results from the lignin content analysis and the HPLC analyses of saponified cell walls. The peak intensity corresponding to lignin-derived compounds was 30% to 40% higher in bk2, whereas the peak intensities of polysaccharide indicators did not change or were only slightly higher. The peak intensities of compounds derived from both guaiacyl (G; m/z 137, 151, 152, 178, 180) and syringyl (S; m/z 153, 165, 167, 208, 210) residues were increased in the bk2 mutant, but the ratios of S to G, calculated for two pairs of selected compounds representing each subunit, were nearly constant. Since pCA is primarily esterified to S residues (Ralph et al., 1994
Bk2 Is Expressed Strongly Only during Early Development Reverse transcriptase-coupled PCR (RT-PCR) was used to examine the transcriptional pattern of Bk2 using gene-specific primers. Bk2 was expressed in most parts of the maize plant (B73 inbred) including roots, shoots, and stems. However, no RT-PCR product could be amplified from plants homozygous either for bk2-ref or bk2-Mu1, indicating that both of these mutant alleles are null. To address how the expression of the Bk2 gene relates to the developmentally specified phenotype of the mutant, total RNA was also extracted from leaves of B73 at weeks 1, 2, 3, 4, and 8 and subjected to semiquantitative RT-PCR. Bk2 transcripts are more abundant at early stages of growth (weeks 1 and 2) than at later stages (weeks 3, 4, and 8; Fig. 12 ). Northern gel-blot analyses of polyA(+)-RNA confirmed a higher transcript level at weeks 1 and 2 with transcript abundance markedly decreasing in weeks 3 and 4 (Fig. 12).
Bk2 Encodes a COBL Protein
Mutations in the COB gene of Arabidopsis were so named because of a change in the orientation of cell expansion in the root from the longitudinal axis to the radial axis, widening the root diameter progressively away from the tip and giving roots the appearance of a the head of a cobra (Hauser et al., 1995
The cleavage site in known GPI-anchored proteins, termed
Similar to other COBL proteins, BK2 possesses a conserved region between amino acids 53 to 217, characteristic of a metal-binding domain of plant phytochelatin synthases (E = 3.6 e–99, with 83%–91% similarity and 72%–80% identity to four plant phytochelatins). Leuchter et al. (1998)
Amino acids 37 to 76 of BK2 also show weak similarity (7%–13%) to a family II cellulose-binding module related to that of several bacterial type II cellulases (Simpson et al., 2000
Although mutation of COBRA and other GPI-anchored proteins affect orientation of expansion, this phenotype is not observed in either bc1 or bk2 mutants. A reduction in secondary cell wall deposition indicates that the activities of these COBL proteins may be restricted to wall deposition in specialized cells after elongation. An independent expression-profiling study showed that the most closely related Arabidopsis COBL4 is coregulated with secondary wall cellulose synthases (Brown et al., 2005
There are no reports of irregular xylem phenotypes in grass mutants. In dicots, defects in secondary cell wall formation, whether due to defects in cellulose synthases or other components, lead to the collapsed or irregular xylem phenotype (Turner et al., 2001
The appearance of the brittle phenotype coincides with the transition from juvenile to adult leaves and a qualitative change in the deposition of lignin. This is apparent from various phase-change and brown midrib mutants (Moose and Sisco, 1994
Despite the drastic increase in lignin content of the bk2 stems, acid phloroglucinol-stained material is reduced in the cells of these stems. This finding is in sharp contrast to that observed in rice (Li et al., 2003
Consistent with a secondary wall function, rice Bc1 demonstrates expression associated primarily with vascular bundles and the rind (Li et al., 2003
Does BK2 function similarly to other COBL proteins that function during primary wall growth and cellulose deposition? Alterations in cell walls can be an indirect consequence of mutations in more global developmental programs and expression of cell wall-related genes is modified in many different signal transduction pathways. Therefore, a cell wall mutant phenotype is not necessarily a result of a mutation in a gene directly involved in cell wall synthesis or assembly. For example, cellulose deficiency is a consequence of several kinds of mutations other than a defect in cellulose synthase catalytic subunits. Mutations in another plasma membrane-associated protein, kobito (Pagant et al., 2002
Plant Material The maize (Zea mays) mutant bk2 was obtained from the Maize Genetics Cooperative as a stock (no. 916C) that had been maintained over many generations as a backcross progeny. To have a uniform background, the material was propagated by backcrossing bk2 mutants with their wild-type heterozygotes an additional five times. These backcrosses resulted in a uniform background where the mutant (bk2/bk2 homozygotes) and wild-type plants (bk2/+ heterozygotes) were indistinguishable from each other except for the appearance of a brittle phenotype at 4 weeks in the bk2 mutants. In this backcross progeny, the mutant and wild-type plants segregated in a 1:1 ratio of homozygotes to heterozygotes. Upon harvest of plant material, it was frozen immediately with liquid nitrogen before being placed at –80°C until all samples had been collected.
We generated another backcross population of bk2 with B73. One hundred and fifty plants from this population were assessed for the brittle phenotype, as well as the genotype of a number of RFLP markers known to map in the vicinity of bk2 on the proximal part of the long arm of chromosome 9. The data obtained placed bk2 between UMC95 and BNL8.17, with BNL8.17 being 4.0 cM proximal and UMC95 2.5 cM distal to the bk2 locus.
DNA extraction and Southern gel-blot analyses were done as described before (Multani et al., 2003
The PCR reaction conditions and the Mu-TIR primer to seek the insertion of a Mu element in bk2-Mu1 were essentially as described before (Multani et al., 2003 To elucidate the molecular nature of the structural polymorphism in bk2-ref, the Expand High Fidelity PCR system of Roche was used. The reaction conditions were set up as recommended by the manufacturer, except for the addition of 5% (v/v) glycerol. The cycle was repeated 30 times and the final elongation time was 15 min at 72°C. All amplified fragments were cloned in the pGEM-T vector from Promega. For RT-PCR, total RNA was isolated from greenhouse-grown B73 plants and 1 µg of total RNA was used for each reaction for all samples. The first strand of cDNA was synthesized using the RETROscript kit from Ambion, essentially as described by the manufacturer. Next, 5 µL from each primary reaction was used for the second-step PCR reaction using bk2-specific primers 1F and 1R. RT-PCR controls were derived from the actin gene that was amplified using the following primers: forward primer 5'-TGTTTCGCCTGAAGATCACCCTGTG-3'; reverse primer 5'-TGAACCTTTCTGACCCAATGGTGATGA-3'.
The third stalk internode of greenhouse-grown plants at anthesis was used for microscopy. For scanning electron microscopy, stalk slices (approximately 1 mm in height) were prepared with a sharp razor and observed directly with a JFM-840 SEM (JEOL). For light microscopy, stalk slices were cut with a razor blade and fixed in 3% glutaraldehyde in 0.1 M potassium phosphate buffer, pH 6.8, under low vacuum in the desiccators overnight. Following dehydration, the samples were embedded in JB-4 resin following manufacturer's instructions (Electron Microscopy Sciences), and then sectioned (5-µm thickness) using a SORVALL type JB-4 Porter-Blum microtome (DuPont Company). The sections were dropped into a water bath (approximately 60°C) to expand them and four slides containing three to four sections each were prepared for each sample. They were either viewed under bright field or UV for autofluorescence (Nikon E800 Fluorescence Microscope; Fryer Company). For lignin staining, stalk slices were cut freehand and then stained with Wiesner's solution (2%, w/v) phloroglucinol in ethanol:50% HCl (v/v) in water (95:5, v/v). Samples of material were stained immediately or were first fixed in formalin-acetic acid-ethanol overnight before staining, and imaged with either Olympus Vanox-S brightfield or Nikon SMZ-U stereo microscope.
The tensile strength of bk2 and wild-type leaves was tested using a tensile grip probe with a TA.XTplus texture analyzer (Texture Technologies) on 2-month-old sections from the sixth leaf (counted from the bottom). Leaf sections (2 mm x 20 mm), avoiding the midrib and major veins, were cut with razor blades either parallel or perpendicular to the minor veins. The thickness of the leaf was measured with a Nikon SMZ 1500 microscope. The leaf section ends were firmly attached to tensile grip plates with an inelastic adhesive (Advanced Formula Instant Krazy glue), leaving a 5-mm gap between the plates. The tensile grip plates were moved apart at 0.1 mm per second. The Texture Exponent 32 version 4 software displayed fracture breakage of the leaf as distance (mm) by force (g). Maximum stress tolerated before breakage was calculated from force measured at breakage and the total tissue load-bearing volume.
A simple one-point bend test was performed to determine brittleness of bk2 and wild-type internodes. Individual fresh stem sections 20-cm long were cut, and the diameters of the cut section ends were measured with a Nikon SMZ 1500 microscope. The one-point bend rig was attached to the TA.XTplus texture analyzer and the probe was raised to a defined height and calibrated. The stem section was placed across two supports of the rig 40 mm apart, with 20 mm on either side of the supports. The probe for the one-point bend test moved toward the sample at a speed of 0.5 mm per second. Stress at fracture was calculated according to the equation:
is the stress at fracture, F is the maximum force before deformation, L is the distance between the supports, and d is the stem diameter (Timoshenko and Young, 1962
The cell walls of various maize tissue samples were pulverized in liquid nitrogen with a mortar and pestle and divided into two portions. One was freeze dried to yield total dry mass, and for the second, cell walls were isolated by homogenization in 1% SDS in 50 mM Tris[HCl], pH 7.2, with a glass-glass motorized grinder (Kontes-Duall, Thomas Scientific). The samples were then heated at 80°C in 1% SDS for 15 min. All samples were washed five times with water through centrifugation and pelleting before the cells were broken again with the glass-glass motorized grinder. Samples were washed three times with water, two times with warm 50% ethanol, and three times with water. The remaining pellet was resuspended in water and freeze dried.
Samples of total dry mass, ethanol-extracted material, and isolated cell walls were assayed for cellulose by acetic-nitric assay (Updegraff, 1969
Pyrolysis-mass spectrometry is a rapid analytical technique to determine plant cell wall composition (Ralph and Hatfield, 1991
Samples of isolated cell walls (approximately 0.5–1 mg) were hydrolyzed with 2 M TFA containing 400 nmol of myoinositol as internal standard for 90 min at 120°C in 1-mL conical Reacti-vials (Pierce Chemical). The cellulose and other undigested polymers were pelleted by centrifugation. This material was suspended in water and assayed for Glc equivalents by phenol-sulfuric colorimetric assay (Dubois et al., 1956
For FTIR microscopy, approximately 5 µL of a slurry of maize cell walls from wild-type and bk2 maize leaves and stems were spotted in individual wells of IR-reflective, gold-plated microscope slides (Thermo-Electron). The slides with cell wall samples were supported on the stage of a Continuum series microscope accessory to a 670 IR spectrophotometer with a liquid nitrogen-cooled mercury-cadmium telluride detector (Thermo-Electron). Spectra were taken in the transflectance mode, where a beam is transmitted through the wall sample, reflected off the gold-plated slide, and then is transmitted through the sample a second time before detection. One hundred twenty-eight scans were coadded at 8 cm–1 resolution. Each set of 10 independent samples was spotted at least five times, with a minimum of five spectra taken from isolated primary cell walls in each spot from different areas of the sample. The resulting spectra were then analyzed with WIN-DAS software (Kemsley, 1998 Sequence data from this article can be found in the GenBank/EMBL data libraries under accession numbers AY328909 (rice BC1 cDNA), DQ139874 (maize Bk2 cDNA), and AL391144 (Arabidopsis COBL4).
We thank Javier Campos for his assistance with the Klason lignin determinations, and Jason Stout, in the laboratory of Clint Chapple, for determinations of the hydroxycinnamic acids by HPLC. This is journal article number 2007–18194 of the Purdue Agricultural Experiment Station. Received May 19, 2007; accepted October 1, 2007; published October 11, 2007.
1 This work was supported by a grant from the National Science Foundation Plant Genome Research Program (to N.C.C., M.C.C., and W.V.), Purdue University start-up funds (to G.J.), and University of Florida funds to purchase a pyrolysis mass spectrometer (to W.V.).
2 Present address: Department of Plant Pathology, Iowa State University, Ames, IA 50011.
3 Present address: Department of Biological Sciences, University of Missouri, Columbia, MO 65211.
4 Present address: Pioneer Hi-Bred International, P.O. Box 1000, Johnston, IA 50131. The author responsible for distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (www.plantphysiol.org) is: Gurmukh Johal (gjohal@purdue.edu).
[C] Some figures in this article are displayed in color online but in black and white in the print edition.
[OA] Open Access articles can be viewed online without a subscription. www.plantphysiol.org/cgi/doi/10.1104/pp.107.102582 * Corresponding author; e-mail gjohal{at}purdue.edu.
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