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First published online January 24, 2008; 10.1104/pp.107.113506 Plant Physiology 146:1322-1332 (2008) © 2008 American Society of Plant Biologists OPEN ACCESS ARTICLE
Serine Palmitoyltransferase, a Key Enzyme for de Novo Synthesis of Sphingolipids, Is Essential for Male Gametophyte Development in Arabidopsis1,[W],[OA]State Key Laboratory of Plant Genomics and National Plant Gene Research Center (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (C.T., H.D., L.S., Y.D., J.M., J.Z., X.Y., J.Z.); and Graduate School, Chinese Academy of Sciences, Beijing 100049, China (C.T., H.D., L.S., Y.D., J.M.)
Sphingolipids are important signaling molecules involved in various cellular activities. De novo sphingolipid synthesis is initiated by a rate-limiting enzyme, serine palmitoyltransferase (SPT), a heterodimer consisting of LONG-CHAIN BASE1 (LCB1) and LCB2 subunits. A mutation in the Arabidopsis thaliana LCB1 gene, lcb1-1, was found to cause embryo lethality. However, the underpinning molecular and cellular mechanisms remain largely unclear. Here, we report the identification of the fumonisin B1 resistant11-2 (fbr11-2) mutant, an allele of lcb1-1. The fbr11-2 mutation, most likely an allele stronger than lcb1-1, was transmitted only through female gametophytes and caused the formation of abortive microspores. During the second pollen mitosis, fbr11-2 initiated apoptotic cell death in binucleated microspores characteristic of nuclear DNA fragmentation, followed by cytoplasm shrinkage and organelle degeneration at the trinucleated stage. In addition, a double mutant with T-DNA insertions in two homologous LCB2 genes showed a phenotype similar to fbr11-2. Consistent with these observations, the FBR11/LCB1 expression was confined in microspores during microgametogenesis. These results suggest that SPT-modulated programmed cell death plays an important role in the regulation of male gametophyte development.
Sphingolipids are a class of complex lipids consisting of a sphingoid long-chain base (LCB) that is amide-linked to a fatty acid. Sphingolipids function as essential components of cellular membranes and important signaling molecules involved in a variety of cellular activities, including cell proliferation, cell differentiation, apoptosis, and stress responses (Spassieva and Hille, 2003
SPT and ceramide synthase are two key enzymes of the pathway. Whereas SPT is a heterodimer consisting of two subunits, LCB1 and LCB2, ceramide synthase is a multisubunit enzyme that can be competitively inhibited by AAL-toxin and fumonisin B1 (FB1), two fungal toxins that are structural analogs of dh-sph (Hanada, 2003
In Arabidopsis, pollen development has been well documented by microscopic studies (Owen and Makaroff, 1995
Identification and Genetic Analysis of the fbr11-2 and fbr11-3 Mutants
In a previous study, we identified and characterized a mutant fumonisin B1 resistant11-1 (fbr11-1), which was a weak allele with a T-DNA insertion in the 3'-untranslated region (UTR) of LCB1 and had no detectable phenotype under normal growth conditions (Shi et al., 2007
To obtain fbr11-2 mutant plants homozygous for the T-DNA insertion, we screened a population derived from self-pollinated FBR11/fbr11-2 heterozygous plants by PCR. However, we failed to recover any homozygous fbr11-2 mutant plants by screening of 444 individual plants. Among these progenies, 205 plants are heterozygous for the T-DNA insertion and 239 plants were wild type. This result suggests that fbr11-2 may cause a gametophyte-lethal phenotype. The fbr11-3 mutant allele, identical to the lcb1-1 mutant, showed an embryo-defective phenotype as previously reported (Chen et al., 2006
Because of the lethality of these mutations, fbr11-2 and lcb1-1 (fbr11-3) were maintained as heterozygous. Similar to that of fbr11-1 (Shi et al., 2007
Data presented above suggest that fbr11-2 may cause gametophytic lethality. To determine the nature of the mutation, we performed reciprocal crosses between the wild type and the FBR11/fbr11-2 heterozygote. The transmission efficiency of the T-DNA insertion was 33.3% through the female gametophytes, lower than expected in wild-type plants (50%). However, essentially no transmission of fbr11-2 through the pollen was found in the tested population (Table I ). These results indicated that both the mutant allele and the T-DNA insertion were transmitted only through female gametophytes, but not male gametophytes.
In lcb1-1 (fbr11-3), the T-DNA insertion showed slightly lower transmission efficiency through male gametophytes (41.4%; Supplemental Table S1), which was consistent with the observation that approximately 6% of pollens were abnormally developed in FBR11/fbr11-3 anthers.
Genetic analysis indicates that the fbr11-2 mutation causes male sterility. We therefore examined the viability of the mutant pollens. Pollens collected from wild-type and FBR11/fbr11-2 flowers were stained with Alexander solution, which stained mature viable pollen grains as purple and dead or dying ones as dark green (Alexander, 1969
To track the expression stage of the fbr11-2 mutation, we followed pollen development in the mutant by microscopy. Semithin sections were prepared from anthers collected at various developmental stages of wild-type and FBR11/fbr11-2 floral inflorescences, and then analyzed by light microscopy. No abnormality of pollen development was found in FBR11/fbr11-2 anthers before stage 12 (Fig. 2, A and C
; anther development stages were defined according to Sanders et al., 1999
To confirm the light microscopic results, we further analyzed pollen development in FBR11/fbr11-2 flowers by 4',6'-diamidino-2-phenylindole (DAPI) staining. In the wild type, normal pollens at different developmental stages, including binucleated and trinucleated microspores, were observed (Fig. 3, A–D ). In FBR11/fbr11-2 anthers, no abnormality was observed in pollen grains at the uninucleated and binucleated stages (Fig. 3, E and F). At the trinucleated stage when the second mitosis is completed, a mixed population of pollen grains was observed. Approximately one-half of the pollen grains displayed a normal phenotype with three nuclei; the other half were smaller and abnormally developed (Fig. 3, G and H). The latter population showed two distinctive DAPI staining patterns. Whereas a portion of pollen grains had no detectable DAPI staining, others displayed a wild-type-like pattern with two or three nuclei (Fig. 3, G and H). In mature pollen grains, however, no DAPI signal or only diffused DAPI signal was detected in the mutant pollen grains that were swollen and misshapen (Fig. 3, I and J). These observations suggest that the degeneration of nuclei in fbr11-2 microspores occurs mainly at the trinucleated stage or after the second pollen mitosis.
Complementation of the fbr11-2 Mutant Phenotype by an FBR11 Transgene
To verify whether the observed abnormal development of microspores was caused by the T-DNA insertion in FBR11, we performed a genetic complementation experiment by crossing FBR11/fbr11-2 (female) plants with a transgenic plant carrying an FBR11 transgene (male; Shi et al., 2007
We noticed that fbr11-2 and lcb1-1 (fbr11-3) showed different phenotypes during development, raising the possibility that the fbr11-2 phenotype is allele specific, rather than representing a general function of LCB1 or SPT. To test this possibility, we analyzed the function of LCB2, a second subunit of SPT. The Arabidopsis genome contains three copies of LCB2-related genes, At3g48780, At3g48790, and At5g23670, of which the former two are arranged as a tandem repeat, presumably originated from a duplication event. Hereafter, we refer to these three genes as LCB2a, LCB2b, and LCB2c, respectively. LCB2b appears to be a truncated form, lacking approximately 140 amino acid residues from the N terminus that is highly conserved across different kingdoms. Previous biochemical studies suggested that LCB2c was a functional LCB2 (Tamura et al., 2001
We identified two T-DNA insertional mutants in LCB2a (SALK_110242) and LCB2c (SALK_061472; Alonso et al., 2003
LCB2 Genes Are Essential for Male Gametogenesis Because plants homozygous for the T-DNA insertions in either LCB2 locus did not show apparent phenotype under normal growth conditions, we attempted to construct lcb2a lcb2c double mutants. In a screen for putative double mutants from an F2 population by PCR, we only recovered plants with two genotypes of lcb2a/lcb2a LCB2c/lcb2c and LCB2a/lcb2a lcb2c/lcb2c, and no double-mutant plants homozygous at both loci were identified. This result suggests that the double mutant is likely gametophyte or embryo lethal. When stained with Alexander solution, approximately 50% of pollens were inviable in anthers derived from lcb2a/lcb2a LCB2c/lcb2c or LCB2a/ lcb2a lcb2c/lcb2c flowers (Fig. 4C). A similar observation was made by scanning electron microscopy (Fig. 4D). These results suggest that the lcb2a lcb2c double mutant is likely affected in male gametophyte development. To genetically verify the above results, we performed reciprocal crosses of LCB2a/lcb2a lcb2c/lcb2c x lcb2a/lcb2a LCB2c/LCB2c and LCB2a/LCB2a lcb2c/lcb2c x lcb2a/lcb2a LCB2c/lcb2c. Similar to that of fbr11-2, the T-DNA insertions in both combinations were transmitted only through female, but not male, gametophytes (Table II ). We conclude from the above data that the lcb2a lcb2c double mutant is male gametophytic lethal. Again, similar to fbr11-2, lcb2a lcb2c showed reduced transmission efficiency of T-DNA through female gametophytes, indicating that SPT is also important for female reproductive development.
Light microscopic studies revealed that defective microspore development mainly occurred at stage 12 in lcb2a lcb2c (Fig. 2, E and F), similar to that in fbr11-2 (Fig. 2, C and D). We have also observed abortive lcb2a lcb2c microspores at stage 11 with a low frequency of 3% to 5%. The defective pollen development phenotype was fully rescued by transforming an LCB2a and an LCB2c transgene into lcb2a/lcb2a LCB2c/lcb2c and LCB2a/lcb2a lcb2c/lcb2c plants, respectively. In both cases, we have obtained transgenic plants homozygous for T-DNA insertions at both LCB2a and LCB2c loci (lcb2a/lcb2a lcb2c/lcb2c plants) that displayed normal pollen development in all tested transgenic lines (Fig. 4C), demonstrating that the observed abnormal pollen development was caused by T-DNA insertions in these two genes. Taken together, these results indicate that the lcb2a lcb2c double mutant shows a phenotype similar to that of fbr11-2, suggesting that LCB1/FBR11 and LCB2 genes function similarly or in a linear pathway. In addition, these results also render it unlikely that the fbr11-2 phenotype is allele specific or caused by a dominant-negative effect (see "Discussion").
To better understand its function, we analyzed the expression pattern of LCB1/FBR11. An LCB1/FBR11 promoter::GUS reporter construct was made and then stably transformed into wild-type plants. Consistent with the results of a previous study (Chen et al., 2006
Cellular Basis of Defective Microspore Development in fbr11-2 and lcb2a lcb2c To reveal the cellular mechanism of the fbr11-2 and lcb2 mutations, we compared the ultrastructures of the mutant and wild-type pollens by transmission electron microscopy. In wild-type pollen sacs at stage 12, highly synchronized and well-developed pollens were observed. At the same developmental stage, approximately one-half of pollen grains were abnormally developed in FBR11/fbr11-2, lcb2a/lcb2a LCB2c/lcb2c, and LCB2a/lcb2a lcb2c/lcb2c anthers. The mutant pollen grains were collapsed and misshapen and the cytoplasm was shrunken (Fig. 6, A and B ).
A wild-type pollen grain contained structurally well-defined nuclei, mitochondria, Golgi apparatus, oil bodies, and vacuoles (Fig. 6, C and D). By contrast, fbr11-2 (Fig. 6, E and F) and lcb2a lab2c (Fig. 6, G and H) pollen grains had no distinctive structures of nuclei and organelles and had reduced numbers of oil bodies and vacuoles. In particular, most organelles were degenerated, resulting in no recognizable membrane systems in the mutant pollens. Compared to the wild type, the extine layer of fbr11-2 and lcb2a lab2c pollen grains remained nearly normal. However, the intine layer of the mutant pollen grains was irregular and became degenerative. Overall, fbr11-2 and lcb2a lab2c pollen grains showed a similar cellular phenotype (Fig. 6, E–H). These results suggest that fbr11-2 and lcb2a lcb2c mutations may trigger a cell death program, characteristics of condensed cytoplasm and degenerated organelles.
To determine whether or not cell death observed in fbr11-2 and lcb2a lcb2c pollens is involved in a PCD-related mechanism, we performed a TdT-mediated dUTP nick-end labeling (TUNEL) experiment to examine possible nuclear DNA fragmentation in wild-type and mutant pollens. Pollens prepared from wild-type, FBR11/fbr11-2, and LCB2a/lcb2a lcb2c/lcb2c flowers at stages 11 to 12 were used for the TUNEL experiment. In pollens prepared from wild-type flowers, no TUNEL-positive signals were detected (n > 2,000). However, a large population of microspores was TUNEL positive in preparations made from FBR11/fbr11-2 (17.1%; n = 1,273) and LCB2a/lcb2a lcb2c/lcb2c (20.8%; n = 315; Fig. 7 ). Notably, most TUNEL-positive microspores were in the binucleated stage (>98%) as revealed by DAPI staining. This result suggests that the onset of PCD occurs in binucleated microspores prior to apparent morphological abnormalities observed in trinucleated microspores (Figs. 2 and 3). Taken together, data presented in Figures 6 and 7 indicate that fbr11-2 and lcb2a lab2c mutant microspores undergo apoptotic-type cell death, which is initiated in the binucleated stage before the completion of the second pollen mitosis.
SPT is a key enzyme in de novo biosynthesis of sphingolipids, catalyzing the first rate-limiting reaction. In this study, we present evidence showing that both subunits are essential for male gametophyte development. Mutations in the single-copied LCB1/FBR11 gene (fbr11-2) or double mutants in the highly homologous LCB2a and LCB2c genes, which presumably result in the lack or reduced de novo synthesis of sphingolipids, cause apoptotic-type cell death in microspores. Therefore, de novo synthesized sphingolipids play a critical role in pollen development, presumably by regulating a PCD event.
As the first rate-limiting enzyme, SPT is essential for growth and development in several eukaryotic organisms thus far documented (Perry, 2002 In addition to its role in embryogenesis, we have revealed a novel function of SPT in male gametophyte development. Several lines of evidence obtained from the analysis of fbr11-2 and lcb2a lcb2c mutants suggest that SPT is essential for male gametogenesis. First, fbr11-2 can only be transmitted through female gametophytes, suggestive of male-germline lethality of the mutation. Second, approximately 50% of pollen grains in self-pollinated FBR11/fbr11-2 heterozygous plants were aborted, characteristic of male gametophytic sterility. Third, microscopic studies revealed that the haploid fbr11-2 pollen grains displayed a variety of developmental abnormalities after the second pollen mitosis, which is well correlated with the expression pattern and timing of FBR11 during male gametogenesis. Fourth, these haploid fbr11-2 pollen grains clearly undergo apoptotic-type cell death, as revealed by transmission electron microscopy and TUNEL analysis. Finally, lcb2a lcb2c double mutants showed a phenotype similar to that of fbr11-2, suggesting that these two classes of genes function similarly during pollen development. More importantly, the fact that fbr11-2 and lcb2a lcb2c pollens show a similar cellular and molecular phenotype rules out the possibility that abnormal male microgametogenesis is an allele-specific phenotype of fbr11-2. Taken together, these observations suggest that de novo synthesis of sphingolipids is essential for male gametophyte development.
We noticed that the lcb1-1 mutation was mainly expressed during embryogenesis, although the cellular basis of the phenotype remained unknown. As mentioned before, because the lcb2a lcb2c mutant shows a phenotype similar, if not identical, to that of fbr11-2, it is unlikely that defective pollen development in fbr11-2 is allele specific. The phenotypic variations between fbr11-2 and lcb1-1 may be due to the different strengths of these two alleles. Several observations suggest that fbr11-2 is likely a stronger allele. First, whereas fbr11-2 showed full penetration of the mutant phenotype during microgametogenesis, only a small fraction of lcb1-1 microspores were aborted. Second, F1 progenies derived from the cross of fbr11-2 (female) and lcb1-1 (male) showed the lcb1-1 phenotype during embryogenesis. Third, it is possible that fbr11-2 is a dominant-negative mutation, due to possible formation of a truncated protein. However, the fbr11-2 mutation did not exert any detectable adverse effects on growth and development of FBR11/fbr11-2 heterozygous plants, thus disfavoring such an argument. Moreover, an FBR11 transgene fully rescues defects in pollen development as well as the sensitivity to FB1 (C. Teng, H. Dong, L. Shi, and J. Zuo, unpublished data) of the mutant, which is again inconsistent with the nature of a dominant-negative mutation. Last, in lcb1-1, a T-DNA was inserted inside intron 2 of FBR11/LCB1, but not in the junction between intron 2 and exon 3 as previously suggested (Chen et al., 2006
Transmission electron microscopy reveals the presence of cell death in fbr11-2 and lcb2a lcb2c pollen grains, characteristics of shrunk cytoplasm, degenerative organelles, and nuclei. Importantly, these cellular defects are preceded by nuclear DNA fragmentation, indicating that the cellular defects of these mutant microspores are caused by a PCD event, presumably due to the lack or reduced de novo synthesis of sphingolipids. A number of mutants that displayed defective pollen mitosis have been characterized, including sidecar pollen (Chen and McCormick, 1996
During male gametogenesis, PCD has been shown as a major regulatory mechanism to control the developmental fate of tapetal cells. The failure of initiation of PCD causes delayed or no degeneration of tapetum, thereby leading to abnormal pollen development, as observed in the rice (Oryza sativa) tapetum degeneration retardation mutant (Li et al., 2006 Sphingolipids have long been considered as major signaling molecules to regulate cell division, cell differentiation, and cell death. Our findings illustrate an important regulatory role of the sphingolipid-modulated PCD in germline cell development. More specifically, together with the observation made in the mmd1 mutant, results presented in this study suggest that PCD can be specifically initiated during male gametophyte development at different stages, which may act as a cellular surveillance mechanism to monitor the male reproductive process. Therefore, PCD plays a more general regulatory role in male reproductive development than previously appreciated.
Plant Materials, Growth Conditions, and Genetic Analysis of fbr Mutants
The Columbia ecotype of Arabidopsis (Arabidopsis thaliana) was used in this study. Unless otherwise indicated, plants were grown under a 16-h-light/8-h-dark cycle at 22°C in soil or on Murashige and Skoog medium (Murashige and Skoog, 1962
Reciprocal crosses and genetic analysis of male gametophytic mutants were performed essentially as described (Johnson-Brousseau and McCormick, 2004
To prepare pollen grains for the TUNEL analysis, flower buds at appropriate stages were homogenized in phosphate-buffered saline (PBS) containing 4% paraformaldehyde, and the mixture was passed through a nylon filter (60 µm). The pollen suspension was fixed for at least 3 h at room temperature. After dehydration in 90% methanol and 10% 0.5 M EGTA (ME), pH 8.0, 4% paraformaldehyde in PBS (PP) gradients (ME:PP = 1:3, 1:1, and 3:1), and absolute ethanol twice, the sample was cleared in 100% xylene. After rehydration in ethanol gradients (95%, 85%, 70%, 55%, and 35%), the sample was resuspended in 10 mM Tris-HCl, pH 7.4, and digested in 1 mg/mL proteinase K for 40 min at 37°C. After washing with PBS, the sample was subjected to TUNEL analysis using the In Situ Cell Death Detection kit according to the manufacturer's instructions (Roche Diagnostics). The reaction was carried out at 37°C for 1 h in the dark, briefly washed with PBS, and then stained with 1 mg/mL DAPI for 5 min at room temperature. The sample was permanently mounted on a poly-Lys slide and analyzed under a fluorescent microscope or a confocal microscope (Olympus FV1000S).
To examine pollen viability, pollen grains were stained with Alexander solution (Alexander, 1969
Transmission electron microscopy was carried out as previously described (Dong et al., 2007
For scanning electron microscopy, samples were fixed, postfixed, and dehydrated as described above. Samples were critical-point dried in liquid CO2, mounted, sputter coated with gold particles, and then observed under a scanning electron microscope (model S-570; Hitachi) as described (Feng et al., 2007
All molecular manipulations were carried out according to standard methods (Sambrook and Russell, 2001
Analysis of gene expression by RT-PCR and real-time PCR was performed essentially as previously described (Sun et al., 2003
Genotyping of fbr11 and lcb2 mutants was performed by PCR with three primers as previously described (Dong et al., 2007
Histochemical analysis of GUS activity was performed as described (Jefferson et al., 1987
The following materials are available in the online version of this article.
We thank the Arabidopsis Biological Resource Center for providing seeds, as well as Sodmergen, Quan Zhang, Weicai Yang, Li Yuan, and Bo Zhang for help on microscopic analyses. We are grateful to Dr. Yongbiao Xue, Dr. Weicai Yang, and Dr. De Ye for critically reading the manuscript. Received November 19, 2007; accepted January 17, 2008; published January 24, 2008.
1 This work was supported by the National Natural Science Foundation of China (grant nos. 30330360 and 30221002; Outstanding Young Investigator Award [30125025] to J.Z.) and the Chinese Academy of Sciences (grant to J.Z.).
2 These authors contributed equally to the article. The author responsible for distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (www.plantphysiol.org) is: Jianru Zuo (jrzuo{at}genetics.ac.cn).
[W] The online version of this article contains Web-only data.
[OA] Open Access articles can be viewed online without a subscription. www.plantphysiol.org/cgi/doi/10.1104/pp.107.113506 * Corresponding author; e-mail jrzuo{at}genetics.ac.cn.
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