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First published online February 27, 2008; 10.1104/pp.108.115832 Plant Physiology 146:1663-1672 (2008) © 2008 American Society of Plant Biologists OPEN ACCESS ARTICLE
The MADS-Domain Transcriptional Regulator AGAMOUS-LIKE15 Promotes Somatic Embryo Development in Arabidopsis and Soybean1,[OA]Department of Plant and Soil Sciences, University of Kentucky, Lexington, Kentucky 40546–0312 (D.T., S.E.P.); Center for Medical Genomics, Emory University School of Medicine, Atlanta, Georgia 30033–5307 (W.T.); and Department of Biological Sciences, Dartmouth College, Hanover, New Hampshire 03755 (K.H.)
The MADS-domain transcriptional regulator AGAMOUS-LIKE15 (AGL15) has been reported to enhance somatic embryo development when constitutively expressed. Here we report that loss-of-function mutants of AGL15, alone or when combined with a loss-of-function mutant of a closely related family member, AGL18, show decreased ability to produce somatic embryos. If constitutive expression of orthologs of AGL15 is able to enhance somatic embryo development in other species, thereby facilitating recovery of transgenic plants, then AGL15 may provide a valuable tool for crop improvement. To test this idea in soybean (Glycine max), a full-length cDNA encoding a putative ortholog of AGL15 was isolated from soybean somatic embryos. Subsequently, the corresponding genomic region of the gene was obtained. This gene, designated GmAGL15, encodes a protein with highest similarity to AGL15 from Arabidopsis (Arabidopsis thaliana) and Brassica napus that accumulates to its highest amount in embryos in these species. Like Arabidopsis and Brassica AGL15, GmAGL15 was preferentially expressed in developing embryos. When ectopically overexpressed the soybean protein was able to enhance somatic embryo development in soybean.
Somatic embryo systems provide a more easily accessible tissue for studies on embryogenesis than does zygotic embryo development that occurs embedded within maternal layers and involves small numbers of cells at the early stages. Somatic embryogenesis (SE) is also important as a means to regenerate plants after transformation or to propagate commercially valuable genotypes. However, early events in somatic embryo development remain a mystery and the ability of an explant to form somatic embryos either directly or indirectly depends on many factors including in some cases particular genotype (Vogel, 2005
A number of genes have been identified in Arabidopsis (Arabidopsis thaliana) that when ectopically expressed promote somatic embryo development. These include the key embryo transcriptional regulators LEAFY COTYLEDON1 (LEC1) and LEC2 that when ectopically expressed will result in a fraction of seedlings that will then produce somatic embryo tissue without need for any hormone treatment. Likewise, ectopic expression of the B3 domain transcription factor FUS3 in the L1 layer via the ML1 promoter causes lateral organs to develop with embryonic features rather than as postgerminative vegetative tissue (Gazzarrini et al., 2004
The APETALA2 domain transcription factor BABYBOOM can also promote SE when ectopically expressed (Boutilier et al., 2002
Although immunoreactive proteins could be detected using AGL15-specific antibodies in a variety of embryos or embryonic tissues from angiosperms (Heck et al., 1995
Loss of Function of AGL15 Leads to Decreased Frequency of Somatic Embryo Development
We previously reported that when developing zygotic embryos are removed from the seed at the green bent cotyledon stage and placed into culture on media lacking any exogenous hormones, embryonic foci will appear on the embryos within 2 to 3 weeks (Harding et al., 2003
We have now examined effects of insertional mutations into AGL15 on production of embryonic tissue in this system. Insertional alleles agl15-3 and agl15-4 are in the Columbia (Col) ecotype and were compared to wild-type Col and 35S:AGL15 introduced into Col for production of secondary embryonic tissue from cultured zygotic embryos. We found that Col wild type was much more efficient at production of secondary embryo tissue than was Ws wild type. For wild-type Col, 47% of cultured embryos had secondary embryonic foci present at 3 weeks of culture (Fig. 1A
) compared to 18.2% of Ws as reported by Harding et al. (2003)
Both insertional alleles into AGL15, agl15-3 and agl15-4, showed a decreased ability to produce secondary embryo tissue compared to Col wild type that was significant at P < 0.01 (Fig. 1A). Production of secondary embryos by the two insertional alleles was not different from one another. An insertional allele in the Ws ecotype, agl15-2, was also significantly impaired in production of secondary embryonic tissue (12% of cultured embryos produced secondary embryonic tissue compared to 22% for Ws wild type; this difference is significant at P < 0.05, data not shown). Unlike in the Ws ecotype where introduction of a 35S:AGL15 transgene significantly enhanced production of embryonic tissue (Harding et al., 2003
We also previously reported that a 35S:AGL15 transgene enhanced production of somatic embryo tissue from SAMs of seedlings in liquid culture (Harding et al., 2003
Because many of the insertional mutants are in the Col ecotype, including two of the agl15 alleles, we tested the effect of accumulation of AGL15 on SAM SE in the Col ecotype. As shown in Figure 1C, for experiments performed with several seed lots and over a 2-year period, an average of 26% of Col wild-type seedlings had somatic embryo tissue at the apex in this system (7,427 seedlings total, n = 29). While over all experiments, agl15-3 and agl15-4 (5,114 seedlings total scored, n = 19) did show a significant reduction in production of SAM somatic embryos at P < 0.05 with 19% of seedlings showing this development, whether the difference was significant or not in individual experiments varied and the difference was not significant at P < 0.01. Because AGL18 is the closest family member to AGL15 and is expressed in overlapping developmental context (Lehti-Shiu et al., 2005
Would ectopic expression of AGL15 enhance SE in other species, perhaps providing a tool to facilitate recovery of transgenic plants via SE? To address this question, we cloned a soybean MADS-box gene from somatic embryo tissue. Isolation of sequences encoding GmAGL15 was initiated by searching the GenBank EST database for possible candidates. One entry (accession no. AW756465) was found annotated as "similar to...AGL15." BLASTX program (http://www.ncbi.nlm.nih.gov/blast) confirmed this EST represented the N-terminal 37 amino acid residues of the conserved MADS domain. To obtain the full-length cDNA, RNA was isolated from a soybean somatic embryo culture (Reddy et al., 2001 The longest cDNA clone (GenBank accession no. AY370659) consisted of an approximately 270-bp 5'-untranslated region (UTR), an approximately 260-bp 3'-UTR plus polyA tail, and an open reading frame of 708 bp, which encodes a protein of 235 amino acid residues. A BLASTP search was performed using the protein sequence. The highest scoring matches were to Arabidopsis AGL15 (AtAGL15), Brassica type I and type II AGL15 (BnAGL15-1 and -2; accession nos. NP_196883, Q39295, and AAB03807, respectively), and to proteins from cotton (Gossypium hirsutum), petunia (Petunia hybrida), and grape (Vitis vinifera) that when used to search the Arabidopsis AGI protein database had highest similarity to AGL15. Pairwise comparison of GmAGL15 protein with the other three AGL15s revealed an identity of approximately 50%. Multiple sequence alignment showed a moderate conservation among these proteins (Fig. 2A ). This was not unexpected, because even between Arabidopsis and B. napus, two closely related species, considerable divergence in AGL15 exists. Nevertheless, the soybean sequence displayed overall homology to the AGL15 proteins, including divergent domains outside the conserved MADS domain. In addition, the soybean protein contained several signature sequences that are rarely found in MADS-domain proteins other than AGL15, such as the C-terminal LENETLRRQI/VE/QELR and LGLP motifs. Therefore, it is likely that GmAGL15 is the soybean ortholog of AGL15.
The 5.8-kb genomic region of GmAGL15 (accession no. AY370660) was amplified from Jack soybean genomic DNA, using primers corresponding to the UTRs of the cDNA. An alignment of the genomic and cDNA sequences revealed that GmAGL15 contained eight exons and seven introns (Fig. 2B). The introns were longer than found in Arabidopsis. Nevertheless, the exon-intron boundary locations appeared to be identical between the two species, as often observed among evolutionarily conserved orthologs. This further suggested GmAGL15 was the soybean counterpart of AGL15.
A phylogenetic tree was constructed using protein sequences of GmAGL15, BnAGL15s, and all 39 Arabidopsis MIKC-type MADS-domain proteins (Parenicová et al., 2003
To investigate the expression pattern of GmAGL15, semiquantitative reverse transcription (RT)-PCR was performed on RNAs isolated from various tissues. As shown in Figure 3
, GmAGL15 transcript was not detected in the vegetative tissues (leaves, stems), or in the open flowers. GmAGL15 mRNA was not detectable at very early stages of seed pod development, but was present in young developing embryos, and the level declined after maturation. This pattern was consistent with that previously reported for AGL15 from Arabidopsis and Brassica (Heck et al., 1995
Ectopic Expression of GmAGL15 Enhances SE in Soybean To test whether ectopic expression of AGL15 via the 35S promoter would enhance SE in soybean, biolistic transformation of Jack soybean somatic embryo tissue was performed with 35S:gGmAGL15 (includes introns), 35S:cGmAGL15 (lacks introns), 35S:AtAGL15 (Arabidopsis AGL15 containing the first three introns), or empty vector control. After recovery for 7 d, the bombarded tissue was cultured for 10 weeks in selective media that contained hygromycin, changing media at 7- to 8-d intervals. After 10 weeks, putative transformants were identified by their green color and characteristic shape and subcultured individually in six-well plates (schematic showing steps involved is shown in Fig. 4A ). The number of putative transformants per bombardment was scored and is shown in Figure 4B. Transformation with either the 35S:gGmAGL15 and 35S:cGmAGL15 transgenes showed enhanced recovery of putative transformants compared to the empty vector control (16.6 and 14.0 putative transformants moved to individual subculture for the genomic and for the cDNA transformations, respectively, compared to 8.0 putative transformants for the empty vector). Transformation with a 35S:AtAGL15 transgene did not significantly increase the number of potential transformants recovered at 10 weeks compared to the empty vector control (Fig. 4B).
Constitutive expression of GmAGL15 also impacted on survival in culture. After individual transformants were subcultured in six-well plates, they were allowed to continue development for an additional 2.5 months under selection. Some putative transformants will proliferate, whereas others die during this period. Individual putative transformants were scored for survival after approximately 2.5 months. For the empty vector control, 21% survived, compared to 33% for 35S:cGmAGL15, 26% for 35S:gGmAGL15, and 25% for 35S:AtAGL15. Promotion of SE and survival in culture thus resulted in a net of 1.7 transformants per bombardment progressing to maturation media for the empty vector control compared to 4.6 for 35S:cGmAGL15, 4.3 for 35S:gGmAGL15, and 2.1 for 35S:AtAGL15.
35S:AGL15 in Arabidopsis cultured embryos leads to long-term (over 11 years) maintenance of development as embryo tissue (Harding et al., 2003 Although 35S:GmAGL15 transgenes enhanced recovery of putative transformants, perhaps by promoting somatic embryo production, the somatic embryos obtained in soybean underwent maturation and differentiation, and produced plantlets that were transplanted to soil. The plants continued development and appeared relatively normal considering the culture process. Of 17 separate events that were recovered as plantlets and subsequently tested, 88% were verified as containing the transgene by PCR. We tested a number of plants for expression and verified transcript accumulation from the transgenes by RT-PCR (using a GmAGL15 forward primer and an oligonucleotide primer to the C-terminal c-myc tag as a reverse primer). As shown in Figure 5A , transcript from the transgene was detected in young leaf tissue of potential transgenics but not in untransformed Jack soybean or in the empty vector transgenics.
To determine if transgenic plants accumulated AGL15, nuclei were isolated from open flowers, extract prepared and analyzed by SDS-PAGE, transfer to membrane and probing with anti-AGL15 serum. As shown in Figure 5B, the different transgenics exhibited a range of AGL15 accumulation from no detectable accumulation from the transgene (data not shown), low levels of accumulation (gGm, 8983-21A), to high levels of accumulation (cGm, 8981-17C; and gGm, 8984-9A). The slightly lower band in Jack and in the empty vector control likely represents endogenous AGL15 that is expressed, at least in Arabidopsis, at low levels in flowers (Fernandez et al., 2000
Previous work demonstrated that ectopic expression of AGL15 could enhance production of somatic embryos from cultured zygotic embryos and from the SAMs of seeds that complete germination in liquid media that contains 2,4-D (Harding et al., 2003
The Arabidopsis ecotype Col was more efficient at somatic embryo production than was Ws in both the cultured embryo and the SAM somatic embryo systems. Other work has demonstrated differences between ecotypes in the ability to produce somatic embryos. Specifically, Luo and Koop (1997)
Two different loss-of-function alleles of AGL15 in the Col ecotype significantly decreased secondary embryo production when zygotic embryos were cultured on media lacking exogenous hormones (Fig. 1A). A loss-of-function allele of AGL15 (agl15-2) in the Ws ecotype also significantly decreased the fraction of cultured zygotic embryos producing secondary embryo tissue in this system (data not shown). Although the double mutant of agl15 with the closest related family member agl18 (Col) was not tested in this system, the agl18 single mutant alone did not show a decrease in fraction of cultured zygotic embryos that produce secondary embryo tissue compared to wild type (data not shown). However, expression of a transgene that produces a form of AGL15 that is predicted to function as a dominant negative (35S:MIK), and could interfere with not only AGL15 but other MADS or proteins that interact with MADS factors, had a more severe effect on production of secondary embryos than did the agl15-2 mutant in the Ws background (2.4% compared to 12%; Harding et al., 2003
There exist systems by which Arabidopsis cultured embryos are used to generate somatic embryo tissue in the presence of 2,4-D and sometimes other hormones (Wu et al., 1992
In the SAM SE system, where seeds are allowed to complete germination in liquid media with 2,4-D, the single agl15 mutant alleles did not show a completely consistent significant reduction in production of SAM somatic embryos for every experiment. However, in some experiments there was such a reduction and when the data collected over more than a 2-year period is considered as a whole, the single agl15 mutants are significantly different from wild type in production of SAM somatic embryos. The single agl18 mutant showed some reduction in frequency of SAM SE compared to wild type but this was not significant. Data as a whole shows significant reduction of SAM SE for the agl15 agl18 double mutant compared to wild type at P < 0.01, and in almost all cases individual experiments showed a significant reduction. It is interesting to note that often the tips of the cotyledons for the double mutant remained green and uncallused (Fig. 1C). This was also observed in the Ws ecotype containing the dominant negative construct 35S:MIK (Harding et al., 2003
To expand our work to plants that are agriculturally relevant, we cloned a gene and genomic region encoding a potential AGL15 ortholog from soybean. Sequence similarity, gene structure, and expression pattern support GmAGL15 as the likely soybean ortholog to previously reported AGL15s from Arabidopsis and B. napus. In addition, ectopic expression of either the cDNA or the intron-containing version of GmAGL15 via the 35S promoter enhanced recovery of transformants via SE. In the Arabidopsis Ws ecotype, ectopic expression of AGL15 promoted the initial production of secondary foci and then enhanced continued development in this mode. Similarly, in soybean, more potential transformants were recovered at 10 weeks, and then, at least for the cDNA version of the transgene, there was a significant enhancement in survival after subculturing the individual putative transformants. However, it was possible to switch the tissue out of embryogenic mode and recover plantlets. Although we have not attempted purposefully to switch the Arabidopsis embryogenic culture tissue that has been developing in embryonic mode for over 11 years, into a postembryonic state, it is interesting that we have observed increased leaf-like development when plates are not subcultured for lengthy times and begin to dry (S.E. Perry, unpublished data). The recovered transgenic soybean plants constitutively expressing AGL15 appear relatively normal, with some plants showing perhaps increased branching or darker green color combined with reduced seed set and some meristem abnormalities. All of these potential phenotypes would be consistent with phenotypes observed with ectopic expression of AGL15 in Arabidopsis (Fernandez et al., 2000
GmAGL15, like Arabidopsis AGL15, appears to promote development as embryonic tissue and may be a valuable tool for recovery of transgenics in this and other species recalcitrant to regeneration by SE. However, ectopic expression of AtAGL15 did not enhance embryogenesis in soybean. The 35S:GmAGL15 constructs were also stably transformed into Arabidopsis and the transgenic plants recovered did not show phenotypes typical of overexpression of AtAGL15 in this plant (i.e. lack of abscission and senescence of floral organs after fertilization; Fernandez et al., 2000
The experiments performed in this report utilized the cultivar Jack that has been reported as highly embryogenic as well as uniformly responsive to induction of SE across diverse locations (Meurer et al., 2001
Plant Material
Arabidopsis (Arabidopsis thaliana) ecotypes Ws and Col wild type, loss-of-function mutants with insertional alleles (agl15-2 in Ws; agl15-3, agl15-4, and agl18-1 in Col), and transgenic plants were sown on germination medium (GM; Murashige and Skoog, 1962
Soybean (Glycine max Merr. Jack) plants were grown in greenhouse at a temperature of approximately 27°C and 15-h-light regime as described by Parrott et al. (1989)
The embryo culture system has been described previously (Harding et al., 2003
The SAM somatic embryo system is as described by Mordhorst et al. (1998)
Two different versions of the cDNA and of the genomic GmAGL15 constructs were generated. One version was untagged, while the other contained a c-myc tag at the carboxyl-terminal end. For the untagged versions, the coding region lacking (cDNA) or containing introns (gDNA) were inserted downstream of the cauliflower mosaic virus 35S promoter in the pBIMC vector (gift from Dr. D. Falcone, University of Massachusetts Lowell). A nopaline synthase (Nos) terminator was present after the stop codon. The 35S-AGL15-Nos expression cassettes were subsequently cloned into pCambia 1301 that also constitutively expresses a GUS gene and confers hygromycin B resistance. To add a c-myc tag onto the C-terminal end of cGm and gGmAGL15, the respective forms of AGL15 were PCR amplified from the original pCambia 1301-based plasmid constructs, using oligonucleotides that introduced restriction sites SpeI at the 5' end and SacI at the 3' end. The reverse 3'-oligonucleotide corresponded to the sequence before the stop codon and engineered in sequences encoding a c-myc epitope. The sequence of the forward and reverse oligonucleotides was 5'-GACTAGTCCATGGGTCGAGGGAAAATCGAG-3' and 5'-GAGCTCTCACAGGTCCTCCTCTGAGATCAGCTTCTGCTCCTCTTTGAAAAGGTTTCTTTCTTGGGGGCC-3', respectively. The SpeI and NcoI (forward) and SacI (reverse) sites are underlined, the sequence encoding the c-myc epitope is in italics, and the engineered stop codon is in bold. For amplification, high-fidelity Taq polymerase (Ex Taq; Takara Bio Inc.) was used following the manufacturer's instructions. The PCR-amplified fragments were gel purified and cloned into the pGEM-T Easy vector system (Promega Corporation) for sequence verification. For cloning into a binary vector system, the SpeI/SacI fragment was recovered from pGEM-T and cloned into pBIMC such that the AGL15-c-myc sequences were flanked by the 35S promoter and Nos terminator. The 35S:cGmAGL15-cmyc:NOS cassette was then restricted with EcoRI/HindIII and the purified fragment was ligated into the pC1301 vector resulting in vector pcGmAGL15-cmyc. To transfer gGmAGL15-cmyc from pBIMC, the plasmid was restricted with SalI and SacI and the purified insert was ligated with vector obtained by digestion of pcGmAGL15-cmyc with the same restriction enzymes. The finished vector 35S:gGmAGL15-cmyc:NOS cassette, i.e. pgGmAGL15-cmyc, was confirmed by sequencing and used for biolistic transformation of soybean.
Somatic embryos were generated from the cultivar Jack (soybean Merr.). Immature pods (approximately 15–20 d after anthesis) were harvested, rinsed with distilled water containing a few drops of liquinox, and surface sterilized by immersing for 30 s in 70% isopropanol, 12 min in 25% Clorox solution with a few drops of liquinox, and washing twice for 5 min with sterile distilled water. Immature zygotic embryos of 4.0 ± 1 mm were aseptically excised and the embryonic axis removed by cutting through both cotyledons. About 25 individual cotyledons were cultured abaxial side down toward the media, on D40 induction media plates under diffused light (Murashige and Skoog salt containing B5 vitamins, 3% Suc, 40 mg L–1 2,4-D, 0.2% phytagel [Sigma], pH 7.0). After 6 to 8 weeks of incubation, the embryos induced on the cotyledons from D40 medium were transferred to the D20 media (Murashige and Skoog salt containing B5 vitamins, 3% Suc, 20 mg L–1 2,4-D, 0.2% phytagel, pH 5.8). Good quality proliferating embryos clusters were subcultured after every 4 weeks on fresh D20 media plates for no more than four cycles. Four to five days before transformation, equal amounts of somatic embryo tissue was placed at the center of a plate containing D20 media. Gold microcarriers (5 mg of 0.6 µm; Bio-Rad) were washed with ethanol (100%, 10 s), incubated on ice for 30 s, centrifuged at approximately 2,300g, and the liquid removed. Ethanol (35 µL of 100%) was added, microcarriers gently vortexed for 1 min, and pelleted (approximately 2,000g, 10 s). One milliliter of water was added and carriers pelleted at 400g, 5 min. The supernatant was removed, and DNA in the order as follows (3 µg at 0.5 µg µL–1, 220 µL sterile water, 250 µL of 2.5 M CaCl2, and 100 µL of 0.1 M spermidine) were added while mixing gently (vortex speed 3), incubated on ice for 2 min, and then mixed gently by vortex, 10 min at 0°C to 4°C. Carriers were pelleted by centrifugation 5 min, approximately 100g, liquid removed, and carriers washed by adding ethanol (600 µL, 100%) and gentle vortexing, 1 min. Wash was removed by pelleting carriers as before, followed by resuspension in 36 µL ethanol and incubation on ice for 1 h. Microcarriers were resuspended by pipetting and 10 µL used per macrocarrier (Bio-Rad, catalog no. 1652335), for bombardment using a DuPont BioListic particle delivery system (model PSD-1000; Bio-Rad), and 1,100-psi rupture discs (Inbio Gold). Bombardment of embryos with each construct was performed in triplicate for each experiment.
After bombardment, plates were sealed with parafilm and tissue let recover by inverting plates and incubating at room temperature under diffused light for 7 d. Tissue was then transferred to 25 mL of FN-Lite (Finner and Nagasawa, 1988
Transgenic plants were recovered by disruption of tissue and transfer to soybean histodifferentiation and maturation media as described by Schmidt et al. (1995)
For detection of accumulation of c-myc-tagged AGL15 transcript in soybean transgenic plants, RNA was extracted from leaf tissue using Trizol (Invitrogen Life Technologies). The AMV RT system (Promega) was used for cDNA synthesis following the manufacturer's protocol. The primers for PCR were 5'-GGTCCCATTCCAATACCAAC-3' corresponding to GmAGL15 and 5'-CAGGTCCTCCTCGTAGATCAGCTT-3' corresponding to c-myc epitope tag. Control primers amplified EF1-
Crude nuclear extracts were prepared from approximately 75 mg of open flowers following the protocol described by Busk and Pagès (1997) Sequence data from this article can be found in the GenBank/EMBL data libraries under accession numbers AtAGL15, At5g13790; GmAGL15, AY370659 (cDNA); and AY370660 (genomic).
We thank Kay McAllister, Jeanne Prather, and Carl Redmond for providing the soybean somatic embryo culture, and Dr. Randy Dinkins and Dr. Glenn Collins and his lab for training and assistance with soybean transformation. We thank Dr. Donna Fernandez for the loss-of-function mutants. This article (no. 07–06–139) is published with the approval of the Director of the Kentucky Agricultural Experiment Station. Received January 3, 2008; accepted February 21, 2008; published February 27, 2008.
1 This work was supported by a National Research Initiative Competitive Grant (grant no. 2005–35301–15699) from the U.S. Department of Agriculture Cooperative State Research, Education, and Extension Service, by the National Science Foundation (grant no. IBN–9984274), and by the University of Kentucky. The author responsible for distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (www.plantphysiol.org) is: Sharyn E. Perry (sperr2{at}uky.edu).
[OA] Open Access articles can be viewed online without a subscription. www.plantphysiol.org/cgi/doi/10.1104/pp.108.115832 * Corresponding author; e-mail sperr2{at}uky.edu.
Adamczyk BJ, Lehti-Shiu MD, Fernandez DE (2007) The MADS-domain factors AGL15 and AGL18 act redundantly as repressors of the floral transition in Arabidopsis. Plant J 50: 1007–1019[CrossRef][Medline] Alonso JM, Stepanova AN, Leisse TJ, Kim CJ, Chen HM, Shinn P, Stevenson DK, Zimmerman J, Barajas P, Cheuk R, et al (2003) Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science 301: 653–657 Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K, editors (1998) Current Protocols in Molecular Biology. John Wiley & Sons, Cambridge, MA Boutilier K, Offringa R, Sharma VK, Kieft H, Ouellet T, Zhang L, Hattori J, Liu CM, van-Lammeren AAM, Miki BLA, et al (2002) Ectopic expression of BABY BOOM triggers a conversion from vegetative to embryonic growth. Plant Cell 14: 1737–1749 Braybrook SA, Stone SL, Park S, Bui AQ, Lee BH, Fischer RL, Goldberg RB, Harada JJ (2006) Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis. Proc Natl Acad Sci USA 103: 3468–3473 Busk PK, Pagès M (1997) Microextraction of nuclear proteins from single maize embryos. Plant Mol Biol Rep 15: 371–376[CrossRef] Curaba J, Moritz T, Blervaque R, Parcy F, Raz V, Herzog M, Vachon G (2004) AtGA3ox2, a key gene responsible for bioactive gibberellin biosynthesis, is regulated during embryogenesis by LEAFY COTYLEDON2 and FUSCA3 in Arabidopsis. Plant Physiol 136: 3660–3669 Fernandez DE, Heck GR, Perry SE, Patterson SE, Bleecker AB, Fang SC (2000) The embryo MADS domain factor AGL15 acts postembryonically: inhibition of perianth senescence and abscission via constitutive expression. Plant Cell 12: 183–197 Finner JJ, Nagasawa A (1988) Development of an embryogenic suspension culture of soybean (Glycine max Merrill.). Plant Cell Tissue Organ Cult 15: 125–136[CrossRef][Web of Science] Gaj MD, Zhang SB, Harada JJ, Lemaux PG (2005) LEAFY COTYLEDON genes are essential for induction of somatic embryogenesis of Arabidopsis. Planta 222: 977–988[CrossRef][Web of Science][Medline] Gallois JL, Nora FR, Mizukami Y, Sablowski R (2004) WUSCHEL induces shoot stem cell activity and developmental plasticity in the root meristem. Genes Dev 18: 375–380 Gazzarrini S, Tsuchiya Y, Lumba S, Okamoto M, McCourt P (2004) The transcription factor FUSCA3 controls developmental timing in Arabidopsis through the hormones gibberellin and abscisic acid. Dev Cell 7: 373–385[CrossRef][Web of Science][Medline] Harding EW, Tang W, Nichols KW, Fernandez DE, Perry SE (2003) Expression and maintenance of embryogenic potential is enhanced through constitutive expression of AGAMOUS-Like 15. Plant Physiol 133: 653–663 Hecht V, Vielle-Calzada JP, Hartog MV, Schmidt ED, Boutilier K, Grossniklaus U, de Vries SC (2001) The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embryogenic competence in culture. Plant Physiol 127: 803–816 Heck GR, Perry SE, Nichols KW, Fernandez DE (1995) AGL15, a MADS domain protein expressed in developing embryos. Plant Cell 7: 1271–1282[Abstract] Hill K, Wang H, Perry SE (2008) A transcriptional repression motif in the MADS factor AGL15 is involved in recruitment of histone deacetylase complex components. Plant J 53: 172–185[Web of Science][Medline] Ikeda-Iwai M, Satoh S, Kamada H (2002) Establishment of a reproducible tissue culture system for the induction of Arabidopsis somatic embryos. J Exp Bot 53: 1575–1580 Ikeda-Iwai M, Umehara M, Satoh S, Kamada H (2003) Stress-induced somatic embryogenesis in vegetative tissues of Arabidopsis thaliana. Plant J 34: 107–114[CrossRef][Web of Science][Medline] Jiménez VM (2005) Involvement of plant hormones and plant growth regulators on in vitro somatic embryogenesis. Plant Growth Regul 47: 91–110[Medline] Karlova R, Boeren S, Russinova E, Aker J, Vervoort J, de Vries S (2006) The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE1 protein complex includes BRASSINOSTEROID-INSENSITIVE1. Plant Cell 18: 626–638 Lehti-Shiu MD, Adamczyk BJ, Fernandez DE (2005) Expression of MADS-box genes during the embryonic phase in Arabidopsis. Plant Mol Biol 58: 89–107[CrossRef][Web of Science][Medline] Lumba S, McCourt P (2005) Preventing leaf identify theft with hormones. Curr Opin Plant Biol 8: 501–505[CrossRef][Web of Science][Medline] Luo YK, Koop HU (1997) Somatic embryogenesis in cultured immature zygotic embryos and leaf protoplasts of Arabidopsis thaliana ecotypes. Planta 202: 387–396[CrossRef][Web of Science][Medline] Meurer CA, Dinkins RD, Redmond CT, McAllister KP, Tucker DT, Walker DR, Parrott WA, Trick HN, Essig JS, Frantz HM, et al (2001) Embryogenic response of multiple soybean [Glycine max (L.) Merr.] cultivars across three locations. In Vitro Cell Dev Biol Plant 37: 62–67[Medline] Mordhorst AP, Voerman KJ, Hartog MV, Meijer EA, van Went J, Koornneef M, de Vries SC (1998) Somatic embryogenesis in Arabidopsis thaliana is facilitated by mutations in genes repressing meristematic cell divisions. Genetics 149: 549–563 Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol Plant 15: 473–497[CrossRef] Namasivayam P (2007) Acquisition of embryogenic competence during somatic embryogenesis. Plant Cell Tissue Organ Cult 90: 1–8[CrossRef][Web of Science] Nolan KE, Irwanto RR, Rose RJ (2003) Auxin up-regulates MtSERK1 expression in both Medicago truncatula root-forming and embryogenic cultures. Plant Physiol 133: 218–230 Parenicová L, de Folter S, Kieffer M, Horner DS, Favalli C, Busscher J, Cook HE, Ingram RM, Kater MM, Davies B, et al (2003) Molecular and phylogenetic analysis of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world. Plant Cell 15: 1538–1551 Parrott WA, Williams EG, Hildebrand DF, Collins GB (1989) Effect of genotype on somatic embryogenesis from immature cotyledons of soybean. Plant Cell Tissue Organ Cult 16: 15–21[CrossRef][Web of Science] Perry SE, Lehti MD, Fernandez DE (1999) The MADS-domain protein AGAMOUS-like 15 accumulates in embryonic tissues with diverse origins. Plant Physiol 120: 121–129 Perry SE, Nichols KW, Fernandez DE (1996) The MADS domain protein AGL15 localizes to the nucleus during early stages of seed development. Plant Cell 8: 1977–1989[Abstract] Pillon E, Terzi M, Baldan B, Mariani P, Schiavo FL (1996) A protocol for obtaining embryonic cell lines from Arabidopsis. Plant J 9: 573–577[CrossRef][Web of Science][Medline] Reddy MSS, Ghabrial SA, Redmond CT, Dinkins RD, Collins GB (2001) Resistance to Bean pod mottle virus in transgenic soybean lines expressing the capsid polyprotein. Phytopathology 91: 831–838[Medline] Rose RJ, Nolan KE (2006) Invited review: genetic regulation of somatic embryogenesis with particular reference to Arabidopsis thaliana and Medicago truncatula. In Vitro Cell Dev Biol Plant 42: 473–481[Web of Science] Rounsley SD, Ditta GS, Yanofsky MF (1995) Diverse roles for MADS box genes in Arabidopsis development. Plant Cell 7: 1259–1269[Abstract] Schmidt MA, Tucke DM, Cahoon EB, Parrott WA (1995) Towards normalization of soybean somatic embryo maturation. Plant Cell Rep 24: 383–391[CrossRef] Specht J, Shoemaker R, Jackson S, Stacey G, Cregan P (2007) Soybean genomics research: a strategic plan for 2008-2012. USDA CSREES. www.csrees.usda.gov/nea/plants/pdfs/soybean_genomics.pdf (January 3, 2008) Vogel G (2005) What Don't We Know? How does a single somatic cell become a whole plant. Science 309: 86 Wang H, Caruso LV, Downie AB, Perry SE (2004) The embryo MADS-domain protein AGAMOUS-Like 15 directly regulates expression of a gene encoding an enzyme involved in gibberellin metabolism. Plant Cell 16: 1206–1219 Wang L, Roossinck MJ (2006) Comparative analysis of expressed sequences reveals a conserved pattern of optimal codon usage in plants. Plant Mol Biol 61: 699–710[CrossRef][Web of Science][Medline] Wu Y, Haberland G, Zhou C, Koop HU (1992) Somatic embryogenesis, formation of morphogenetic callus and normal development in zygotic embryos of Arabidopsis thaliana in vitro. Protoplasma 169: 89–96[CrossRef][Web of Science] Zhu C, Perry SE (2005) Control of expression and autoregulation of AGL15, a member of the MADS-box family. Plant J 41: 583–594[CrossRef][Web of Science][Medline] Zuo JR, Niu QW, Frugis G, Chua NH (2002) The WUSCHEL gene promotes vegetative-to-embryonic transition in Arabidopsis. Plant J 30: 349–359[CrossRef][Web of Science][Medline] This article has been cited by other articles:
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