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First published online August 22, 2008; 10.1104/pp.108.123547 Plant Physiology 148:808-817 (2008) © 2008 American Society of Plant Biologists OPEN ACCESS ARTICLE
Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants1,[C],[W],[OA]Division of Applied Life Science (BK21 Program), EB-NCRC and Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660–701, Korea (Y.H.C., J.C.M., J.H.P., W.I.F., H.H.J., J.R.L., Y.M.L., S.T.K., C.O.L., J.-Y.K., D.-J.Y., K.O.L., S.Y.L.); Department of Molecular Biology, Pusan National University, Busan 609–735, Korea (H.-S.K., I.S.Z, C.-H.L.); and School of Life Sciences and Biotechnology, Korea University, Seoul 136–701, Korea (Y.-Y.C.)
Plant cells contain several thioredoxin isoforms that are characterized by subcellular localization and substrate specificity. Here, we describe the functional characterization of a rice (Oryza sativa) thioredoxin m isoform (Ostrxm) using a reverse genetics technique. Ostrxm showed green tissue-specific and light-responsive mRNA expression. Ostrxm was localized in chloroplasts of rice mesophyll cells, and the recombinant protein showed dithiothreitol-dependent insulin β-chain reduction activity in vitro. RNA interference (RNAi) of Ostrxm resulted in rice plants with developmental defects, including semidwarfism, pale-green leaves, abnormal chloroplast structure, and reduced carotenoid and chlorophyll content. Ostrxm RNAi plants showed remarkably decreased Fv/Fm values under high irradiance conditions (1,000 µmol m–2 s–1) with delayed recovery. Two-dimensional electrophoresis and matrix-assisted laser-desorption/ionization time-of-flight analysis showed that the levels of several chloroplast proteins critical for photosynthesis and biogenesis were significantly decreased in Ostrxm RNAi plants. Furthermore, 2-Cys peroxiredoxin, a known target of thioredoxin, was present in oxidized forms, and hydrogen peroxide levels were increased in Ostrxm RNAi plants. The pleiotropic effects of Ostrxm RNAi suggest that Ostrxm plays an important role in the redox regulation of chloroplast target proteins involved in diverse physiological functions.
Thioredoxins are ubiquitously distributed proteins that regulate numerous cellular processes. All thioredoxins have a highly conserved active-site sequence that contains two redox-active Cys residues in a conserved motif, Trp-Cys-Gly-Pro-Cys (Holmgren, 1989
Chloroplast thioredoxins are implicated in the light-dependent enzyme regulation of photosynthetic organisms from cyanobacteria to higher plants (Ruelland and Miginiac-Maslow, 1999
Although the molecular characteristics and biochemical properties of chloroplast thioredoxins have been well studied in vitro (Scheibe and Anderson, 1981
Isolation and Expression Pattern of Ostrxm A search of The Institute for Genomic Research rice genome database (http://www.tigr.org/tigr-scripts/e2k1/osa1/putative_function_search.pl) with the search term "thioredoxin m-type" revealed matches with three genes (Os02g42700, Os04g44830, and Os12g08730). Alignment and phylogenetic analysis of the corresponding cDNA sequences of the three genes revealed that AK099517 (Os02g42700) and AK069195 (Os04g44830) share a sequence identity of 52.8%, but that they significantly diverge from AJ005841 (Os12g08730), sharing only 24.2% and 23.9% sequence identity with this gene, respectively (Supplemental Fig. S1). A cDNA corresponding to Os12g08730 designated as Ostrxm was isolated from a rice leaf cDNA library with the goal of investigating the in vivo function of the protein. A rice functional genomics database (http://signal.salk.edu/cgi-bin/RiceGE) search using the Ostrxm cDNA sequence as a query revealed that the gene comprises two exons interrupted by an intron and that it spans about 1 kb. The high degree of cDNA sequence divergences of Os02g42700 and Os04g44830 from Ostrxm are consistent with a Southern-blot analysis of rice genomic DNA using the Ostrxm cDNA as a probe, which revealed a single hybridizing band (Fig. 1A ) and with a BLAST search of a rice genomic DNA database using the cDNA sequence as a query, which hit a single highly homologous gene. When expression of the three genes was evaluated by reverse transcription (RT)-PCR analysis, Ostrxm showed relatively higher expression and Os02g42700 and Os04g44830 were expressed at very low levels in 12-d-old seedlings. Northern-blot analysis was then performed to examine the expression pattern of the Ostrxm gene. As seen in Figure 1B, Ostrxm is predominantly expressed in leaf and floral tissue. To examine the light-dependent expression of Ostrxm, 12-d-old rice seedlings were allowed to adapt to the dark for 24 h and then exposed to light for specified times. Expression of Ostrxm transcripts in the seedlings began to increase after 3 h of light treatment and it was maintained continuously up to 24 h (Fig. 1C).
Subcellular Localization and Disulfide Oxidoreductase Activity of Recombinant Ostrxm
To determine the subcellular localization of Ostrxm in rice, we generated transgenic rice plants expressing Ostrxm-smGFP or
In an experiment to investigate the disulfide reductase activity of the protein, recombinant Ostrxm was tested for its ability to reduce the insulin β-chain, an artificial substrate of thioredoxins. Recombinant Ostrxm reduced the insulin β-chain only in the presence of dithiothreitol (DTT; Fig. 2B). In the absence of DTT or when DTT was replaced with ascorbate, the protein was completely unable to reduce insulin (data not shown), indicating that Ostrxm possesses thiol-dependent disulfide reductase activity. However, the disulfide reductase activity of Ostrxm was lower than that of Escherichia coli thioredoxin. These results indicate that Ostrxm is a bioactive disulfide oxidoreductase in chloroplasts.
To study the physiological role of Ostrxm in rice, we generated Ostrxm RNAi transgenic plants that showed a significantly reduced expression pattern of Ostrxm (Fig. 3 ). Fifteen hygromycin-resistant T0 transformants were transferred into soil and grown in a greenhouse and self-pollinated to obtain segregating T1 progeny for genetic analysis. Integration and copy number of the T-DNA were confirmed by Southern-blot analysis (Fig. 3B). Among the 15 hygromycin-resistant T0 transformants, only four lines survived and produced T1 seeds. The four lines showed a segregation pattern of 3:1 for hygromycin resistance (Table I ). Northern-blot analysis of the four surviving transgenic lines showed that Ostrxm expression was efficiently suppressed in all the RNAi transgenic lines (Fig. 3C). Two lines, 4 and 14, were selected for further analysis. T2 and T3 Ostrxm RNAi transgenic lines used for experiments were easily distinguished from segregating wild-type plants by their pale-green and semidwarf phenotypes. When gene-specific RT-PCR was performed to check the specificity and efficiency of the targeted knock-down of the Ostrxm gene, about 90% of Ostrxm transcripts was found to be specifically decreased, whereas transcripts of Os0242700 and Os04g44830 were not affected by Ostrxm RNAi (Supplemental Fig. S1C).
Germination was scored following seed imbibition and the subsequent development of roots and shoots was monitored. Both wild-type and Ostrxm RNAi seeds had germinated, with slight differences in germination time (Fig. 4A ). When roots and shoots were examined, the RNAi transgenic rice seedlings exhibited marked dwarf phenotype compared to the wild-type seedlings (Fig. 4B). The Ostrxm RNAi transgenic lines also had pale-green leaves with light-yellow stripes, and exhibited reduced plant mass, tiller number (about 70%), and semidwarfism (Fig. 4, C and D). However, there was no significant difference in the leaf number. Ostrxm RNAi transgenic rice produced immature panicles and empty spikelets and had significantly reduced grain yields compared to wild-type plants (Fig. 4E). The average spikelet number per panicle in Ostrxm RNAi transgenic rice was 46.7 ± 3.6 compared with 67.0 ± 4.1 in the wild type.
Structural Defect of the Photosynthetic Apparatus in Ostrxm RNAi Plants The pale-green and semidwarf phenotypes urged us to investigate chloroplast structure and the photosynthetic apparatus of Ostrxm RNAi plants. When leaves were examined under a light microscope, we observed decreased numbers of chloroplasts per mesophyll cell in Ostrxm RNAi plants compared to wild-type plants, and the shape and size of chloroplasts were irregular in Ostrxm RNAi plants compared to those of wild-type plants (Fig. 5, A and B ). When chloroplasts of wild-type leaves were investigated by transmission electron microscopy, well-defined grana and stroma-thylakoid boundaries and regularly shaped starch grains were observed (Fig. 5, C and E). In contrast, chloroplasts from Ostrxm RNAi plants were of abnormal shape, their thylakoid boundaries were vague, and they lacked regularly shaped starch grains (Fig. 5, D and F). Overall, the ultrastructural defects observed in the leaves and chloroplasts of Ostrxm RNAi transgenic plants suggested that Ostrxm is required for chloroplast biogenesis and differentiation.
Pigment Content and Photosynthetic Efficiency of Ostrxm RNAi Plants In Ostrxm RNAi plants, chlorophyll (Chl) content per fresh weight was significantly decreased to 76% in the case of RNAi 4 or 53% in the case of RNAi 14. The amount of carotenoids and xanthophyll cycle pigments was also decreased; however, their relative levels with respect to total Chl were different. Thus, the relative amounts of neoxanthin and lutein were decreased in Ostrxm RNAi plants compared to wild-type and vector plants, but those of β-carotene and the pool size of the xanthophyll cycle pigments were increased in Ostrxm RNAi plants (Table II ). In addition, the Chl a/b ratio was slightly higher in the leaves of Ostrxm RNAi plants compared to wild-type plants.
Because Ostrxm RNAi plants had reduced pigment content and structurally defective chloroplasts, we measured the potential quantum yield of PSII (Fv/Fm). Under high light irradiance of 1,000 µmol m–2 s–1 for 4 h, Ostrxm RNAi plants showed significant decreases in Fv/Fm by about approximately 30%, whereas wild-type plants showed about approximately 15% decrease (Fig. 6 ). After 4 h, the Fv/Fm of wild-type plants recovered to about 95%, whereas that of Ostrxm RNAi plants recovered to about 75%, and it recovered thereafter almost fully, but relatively slowly.
Redox State of Ostrxm RNAi Plants
Thioredoxin m, acting as an electron donor for Cys-containing proteins, may regulate the activities of target proteins by reducing their disulfide bonds. To explore this hypothesis, the redox state of endogenous 2-Cys peroxiredoxin (2-Cys Prx; Motohashi et al., 2001
Despite extensive in vitro characterization of thioredoxin m in plants, its in vivo function remains to be determined. Thus, we generated Ostrxm RNAi transgenic rice plants to investigate the in vivo function of Ostrxm in planta. Ostrxm RNAi plants showed phenotypes such as pale-green leaves, growth inhibition, reduced Chl and pigment content, decreased photosynthetic efficiency, defective chloroplast development, and inactivation of 2-Cys Prx. These results raise the possibility that some of the important biosynthetic pathways in chloroplasts are linked to the light-dependent thioredoxin electron transfer chain.
In higher plants, carotenoids mainly accumulate in the thylakoid membrane of chloroplasts, where they function to harvest light and protect the photosynthetic apparatus from oxidative damage by quenching the triplet excited state of Chl (3Chl) and reactive singlet oxygen (1O2) and dissipating excess energy (Demmig-Adams et al., 1996
Recent approaches for identifying targets of chloroplast thioredoxins have provided new insights into the functions of plant thioredoxins (Motohashi et al., 2001
Photoreduction of oxygen in PSI of chloroplasts generates superoxide anion (O2–) as the primary product of reduced oxygen species. O2– is converted to H2O2 and O2 by superoxide dismutase. To avoid photoinhibition and protect target molecules in chloroplasts, the immediate removal of H2O2 at the site of production is essential. H2O2 in chloroplasts is rapidly reduced to water by ascorbate catalyzed with ascorbate peroxidase in PSI (Asada, 2006
Plant Materials
Rice (Oryza sativa Dong-jin) was used for all experiments. Ostrxm RNAi transgenic rice was obtained by Agrobacterium-mediated transformation of embryonic callus using the RNAi technique. Hygromycin selection and plant regeneration were carried out as described (Dai et al., 2001
RT-PCR was performed to measure the mRNA expression of the Os02g42700, Os04g44830, and Os12g08730 genes and to clone the Ostrxm cDNA (AJ005841). PCRs were performed on a PTC-0220 PCR machine (MJ Research) using 100 ng cDNA, 5 pmol each oligonucleotide primer, 200 µM each dNTP, 1 unit Ex Taq polymerase (TaKaRa Bio) and 1x Ex Taq polymerase buffer in a 20-µL volume. The PCR program initially started with a 95°C denaturation for 5 min, followed by 25 to 35 cycles of 95°C/1 min, 60°C/30 s, 72°C/1 min. The less expressed transcripts of Os02g42700 and Os04g44830 required more than 30 cycles of PCR for detection, whereas 25 cycles were enough for Os12g08730. Specific PCR primers for genes encoding Ostrxm isoforms were used (Os02g42700F: 5'-TCGCCAAGCCAGCCGCGTCTC-3', Os02g42700F: 5'-CAGGGCTCAGCCTTGAATTGCATTTAT-3', Os04g44830F: 5'-CCGTCTGCTCCTCTCCCCTCG-3', Os04g44830F: 5'-CAGGCTTCCTTGCGACTTTCATGATTT-3', Os12g08730F: 5'-ATGGCGTTGGAGACGTGCTTC-3', and Os12g08730R: 5'-GCCACAGTATTGATTCCATGGAGTAGTAGGAT-3').
For Southern-blot analysis, 10 µg of rice genomic DNA were digested with BamHI, EcoRI, and HindIII, separated on a 0.8% agarose gel, and transferred to a nylon membrane (Amersham). The membrane was hybridized and washed as described previously (Cheong et al., 1999
cDNA encoding mature Ostrxm was subcloned into pGEX and expressed in Escherichia coli strain BL21 (DE3), and recombinant protein was purified as described previously (Jang et al., 2004
PCR was used to generate cDNA fragments encoding the full-length Ostrxm protein (amino acids 1–172) and the mature form of Ostrxm (amino acids 65–172). The cDNA fragments were ligated in frame with smGFP to create Ostrxm::smGFP and
A 1-kb PCR fragment derived from the first intron of OsCDPK (accession no. AF 194414) was ligated into the PstI/EcoRI restriction sites of pBluescript (Stratagene). An open reading frame (519 bp) of the Ostrxm cDNA with EcoRI/ClaI restriction sites was inserted downstream of the intron, in the sense orientation. An open reading frame of the Ostrxm cDNA with BamHI/PstI restriction sites was inserted upstream of the intron in the antisense orientation. The complete Ostrxm RNAi construct contained an antisense fragment of the Ostrxm cDNA, followed by the OsCDPK intron, and then by the sense fragment of the Ostrxm cDNA, which included a stop codon. The Ostrxm RNAi construct was inserted into the BamHI/ClaI sites of pCAMBIA1300 between the cauliflower mosaic virus 35S promoter and the Ocs terminator to generate pCAMBIA1300::Ostrxm. The Ostrxm RNAi plasmid was then transformed into rice using Agrobacterium strain LBA4404, as described previously (Dai et al., 2001
Photosynthetic pigments were analyzed according to Gilmore and Yamamoto (1991a)
Plant tissues were fixed in a solution containing 2.5% glutaraldehyde and 4% paraformaldehyde in 0.1 M phosphate buffer (pH 7.4) at 4°C for 4 h. They were then rinsed in 0.1 M phosphate buffer (pH 7.4) and treated with 1% (w/v) osmium tetraoxide for 4 h at 4°C. After rinsing with the phosphate buffer, the samples were dehydrated and embedded in LR White resin (London Resin Company). Thin sections (40- to 50-nm thickness) were prepared with an ultramicrotome (RMC MTXL) and collected on nickel grids (1-GN, 150 mesh). The sections were stained with uranyl acetate and lead citrate and examined using a JEM 100CXII transmission electron microscope (Gothandam et al., 2005
Leaf segments from the same plants described in the pigment analysis section were floated on tap water to avoid water loss, and photoinhibitory treatments were performed using a metal-halide lamp at 28°C. The photon flux density reaching the leaf surfaces was about 1,000 µmol m–2 s–1, and a 15-cm-deep water bath was placed under the lamp to avoid overheating. Fv/Fm is a Chl fluorescence parameter used to evaluate the maximum or potential quantum efficiency of PSII and its decrease in plant leaves is reliable evidence that the leaves are subjected to stress. Therefore, photoinhibition was assessed by measuring Fv/Fm before and after high light treatments using a portable fluorometer. A saturating light pulse (3,000 µmol m–2 s–1; 800-ms pulse duration) was applied to measure Fm. Fv/Fm was measured using leaf blade after dark adaptation for 15 min. After photoinhibition, leaves were allowed to recover at 20 µmol m–2 s–1 for the indicated time periods. At least three leaf segments were used and three independent experiments were carried out, giving nine replications for each time point.
Two grams of rice plant leaves ground in liquid nitrogen were homogenized in 10 mL ice-cold Mg/Nonidet P-40 (NP-40) extraction buffer containing 0.5 M Tris-HCl (pH 8.3), 2% (v/v) NP-40, 20 mM MgCl2, 1 mM phenylmethylsulfonyl fluoride, 1% polyvinyl polypyrrolidone, and 0.7 M Suc. 2-DE, in-gel digestion, and protein identification were performed according to previously reported methods (Kim et al., 2004
To measure H2O2 levels, plants grown in sunlight conditions were used. Leaves of 60-d-old rice harvested at the midnight (dark) or midday (sunlight, 1,750 µmol m–2 s–1) were analyzed. Leaves (0.2 g) were ground with mortar and pestle in 2 mL of 0.2 M HClO4. The slurry was centrifuged at 20,000g for 5 min. The supernatant was neutralized with 4 M KOH to pH 7.5 and centrifuged at 20,000g for 1 min. An aliquot (100 µL) of supernatant was applied to a 2-mL column of AG-1-X2 resin (Bio-Rad) and the column was eluted with 2.5 mL of distilled water. The eluate was used for the assay of H2O2. Assays were performed with an Amplex red H2O2/peroxidase assay kit (Molecular Probes) according to the manufacturer's instructions.
The following materials are available in the online version of this article.
Received May 26, 2008; accepted August 11, 2008; published August 22, 2008.
1 This work was supported by grants from the KOSEF/MOST for the EB-NCRC (R15–2003–012–01001–0), CFGC (CG3313–1), NRL (M10600000205–06J0000–20510), Health 21 R&D Project (A060549), the Korea Research Foundation (KRF–2003–908–F00003 to Y.H.C.), and the BK21 Program, the Ministry of Education and Human Resources Development, Korea.
2 These authors contributed equally to this article. The author responsible for distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (www.plantphysiol.org) is: Kyun Oh Lee (leeko{at}gnu.ac.kr).
[C] Some figures in this article are displayed in color online but in black and white in the print edition.
[W] The online version of this article contains Web-only data.
[OA] Open Access articles can be viewed online without a subscription. www.plantphysiol.org/cgi/doi/10.1104/pp.108.123547 * Corresponding author; e-mail leeko{at}gnu.ac.kr.
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