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First published online September 5, 2008; 10.1104/pp.108.118810 Plant Physiology 148:1474-1486 (2008) © 2008 American Society of Plant Biologists OPEN ACCESS ARTICLE
AtCCX3 Is an Arabidopsis Endomembrane H+-Dependent K+ Transporter1,[W],[OA]Vegetable and Fruit Improvement Center, Texas A&M University, College Station, Texas 77845 (J.M., S.P., K.D.H.); Plant Physiology Group, United States Department of Agriculture/Agriculture Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, Texas 77030 (J.M., K.D.H.); Department of Plant Biology, University of Minnesota, St. Paul, Minnesota 55108 (H.T., J.M.W.); and Department of Immunology, M.D. Anderson Cancer Center, Houston, Texas 77030 (C.S.S.)
The Arabidopsis (Arabidopsis thaliana) cation calcium exchangers (CCXs) were recently identified as a subfamily of cation transporters; however, no plant CCXs have been functionally characterized. Here, we show that Arabidopsis AtCCX3 (At3g14070) and AtCCX4 (At1g54115) can suppress yeast mutants defective in Na+, K+, and Mn2+ transport. We also report high-capacity uptake of 86Rb+ in tonoplast-enriched vesicles from yeast expressing AtCCX3. Cation competition studies showed inhibition of 86Rb+ uptake in AtCCX3 cells by excess Na+, K+, and Mn2+. Functional epitope-tagged AtCCX3 fusion proteins were localized to endomembranes in plants and yeast. In Arabidopsis, AtCCX3 is primarily expressed in flowers, while AtCCX4 is expressed throughout the plant. Quantitative polymerase chain reaction showed that expression of AtCCX3 increased in plants treated with NaCl, KCl, and MnCl2. Insertional mutant lines of AtCCX3 and AtCCX4 displayed no apparent growth defects; however, overexpression of AtCCX3 caused increased Na+ accumulation and increased 86Rb+ transport. Uptake of 86Rb+ increased in tonoplast-enriched membranes isolated from Arabidopsis lines expressing CCX3 driven by the cauliflower mosaic virus 35S promoter. Overexpression of AtCCX3 in tobacco (Nicotiana tabacum) produced lesions in the leaves, stunted growth, and resulted in the accumulation of higher levels of numerous cations. In summary, these findings suggest that AtCCX3 is an endomembrane-localized H+-dependent K+ transporter with apparent Na+ and Mn2+ transport properties distinct from those of previously characterized plant transporters.
The plant vacuole and other endomembrane compartments play an important role in the sequestration of various compounds (Marschner, 1995
CCXs (for calcium cation exchangers) were previously identified as CAX (for cation exchanger) homologs. Recently CAX7 to CAX11 were reclassified as CCX1 to CCX5 due to higher homology to mammalian K+-dependent Na+/Ca2+ antiporters (Shigaki et al., 2006
CAX proteins have N-terminal regulatory domains (Pittman and Hirschi, 2001
Arabidopsis (Arabidopsis thaliana) CCXs are related to mammalian plasma membrane Na+/Ca2+ exchangers (NCXs). The NCXs mediate the exchange of Na+ for Ca2+ depending on the electrochemical gradients, and NCKXs (for Na2+/Ca2+-K+ exchangers) transport K+ and Ca2+ in exchange for Na+ (Lytton, 2007 To investigate the function of CCX transporters, we cloned AtCCX3 and the closely related AtCCX4. We expressed the transporters in various yeast strains in order to compare and contrast their functions to those of AtCAX1 and AtNHX1 transporters. We monitored the expression and localization of AtCCX3 in yeast cells and in planta. Finally, we overexpressed AtCCX3 in plants and examined ion uptake and plant growth. Collectively, these findings demonstrate that AtCCX3 is an endomembrane H+-dependent K+ transporter.
AtCCXs Show Homology to Mammalian NCKXs
A family of genes originally identified as members of plant CAXs (Maser et al., 2001
AtCCX3 and AtCCX4 were cloned into the piHGpd vector (Nathan et al., 1999
We also tested the possibility that AtCCX3 and AtCCX4 transport other metals, thus making the host yeast cells tolerant or hypersensitive to these metals. Expression of AtCCX3 in an Mg2+-requiring strain (CM66) did not suppress the ion sensitivity of these strains (MacDiarmid and Gardner, 1998
In order to determine whether AtCCX3 mediated K+ transport, we measured 86Rb+ uptake as a tracer for K+ into yeast cells and yeast microsomal membranes (Venema et al., 2002
Transport assays were performed using vacuole membrane-enriched vesicles from yeast. Membranes isolated from wx1 cells expressing AtCCX3 or AtNHX1 showed increased 86Rb+ uptake at 50 mM K+ concentrations (Fig. 2A
) than that of wx1 with vector only. At low external K+ (0.5 mM) concentrations, 86Rb+ uptake by cells expressing AtCCX3 and AtNHX1 was similar to that of vector controls (data not shown). As shown before, uptake of 86Rb+ by AtNHX1 was inhibited by benzamil (Venema et al., 2003
These phenotypes suggest that AtCCX3 has a role in K+ transport, but the suppression of the smf1, smf2 Mn2+-sensitive yeast strain also suggests that AtCCX3 functions in Mn2+ transport (Cohen et al., 2000
We tested the alkali cation content in mutant alone or in yeast strains expressing AtCCX3 and AtNHX1 after cells were exposed to 100 mM NaCl or KCl. Yeast cells expressing AtCCX3 and AtNHX1 showed a 25% increase in Na+ and a 50% increase in K+ content, compared with yeast cells expressing only the vector (Fig. 3 ). Thus, CCX3 promotes Na+ or K+ uptake similar to NHX1. In a preliminary experiment of wild-type W303-1A yeast cells expressing AtCCX3, the Mn2+ content was 85% higher compared with that in cells expressing only vector. Thus, AtCCX3 expressed in yeast cells could play a role in Na+, K+, and Mn2+ homeostasis.
Localization of AtCCX3 in Yeast and Plants
An N-terminal HA-tagged AtCCX3 construct conferred resistance to high Na+ and K+ stress in wx1 (data not shown). We utilized this construct to identify the cellular location of AtCCX3. As shown in Figure 4A
, western-blot analysis of yeast membranes fractionated on Suc gradients showed that AtCCX3 colocalized with vacuolar membranes. The distribution of HA-AtCCX3 corresponded with the yeast vacuolar membrane marker alkaline phosphatase but not with the plasma membrane marker Pma1p. As further confirmation of yeast endomembrane localization, the AtCCX3-GFP expressed in yeast also appeared to reside on intracellular membranes, as the signal overlapped with vacuolar protein P51 fused to red fluorescent protein (Fig. 4B; Carter et al., 2004
To investigate the subcellular localization of AtCAX3 in plants, microsomal membranes from transgenic lines harboring the AtCCX3-GFP fusion protein were fractionated. Centrifugation through a linear Suc gradient was first used to compare the distribution of the epitope-tagged transporter in transgenic Arabidopsis (Fig. 5A ) with that of markers for the tonoplast, plasma membrane, and endoplasmic reticulum lumen. As shown in Figure 5A, the tagged proteins were located in fractions of 26% to 37% Suc. The AtCCX3-GFP protein was associated with fractions enriched in endomembranes, as indicated by the sedimentation profiles, which overlapped with a vacuole-type H+-ATPase (V-ATPase subunit B; Ward et al., 1992
Expression of AtCCX3 and AtCCX4 in Arabidopsis
Analysis of publicly available Arabidopsis microarray data indicates that AtCCX3 is expressed at very low levels and predominantly in flowers and pollen grains (Bock et al., 2006
The ability of AtCCX3 to suppress a yeast mutant sensitive to Na+ and K+ and the increased sensitivity of wild-type yeast to Mn2+ prompted us to examine whether these or other cations could induce AtCCX3 expression in Arabidopsis roots, leaves, and flowers. Expression of AtCCX3 increased 2- to 3-fold in response to exogenous Na+ and K+, and by 0.5-fold compared with Mn2+, in both roots and flowers (Fig. 6B). We then directly compared the changes in AtCCX3 expression with those of AtNHX1 under salt stress conditions. An increase in AtNHX1 in response to Na+ has been reported previously (Yokoi et al., 2002
To investigate the physiological function of AtCCX3 and AtCCX4 in Arabidopsis, we obtained two independent lines containing T-DNA insertions inside each open reading frame (Supplemental Fig. S2D). Homozygous lines were isolated by screening for the presence of the T-DNA insert and lack of native AtCCX. We isolated two different mutant alleles for AtCCX3, termed atccx3-1 and atccx3-2, and two alleles for AtCCX4, termed atccx4-1 and atccx4-2. RT-PCR analysis of the four different alleles showed no expression of AtCCX3 or AtCCX4 in the respective mutants (Supplemental Fig. S2, B and C). Pollen viability, pollen tube growth, and seed set were not altered in these mutants (data not shown), nor were there any other discernible growth abnormalities.
To further test the function of AtCCX3 in Arabidopsis, AtsCCX3 and AtCCX3 were expressed using the cauliflower mosaic virus 35S promoter. Despite increased expression of AtCCX3 RNA in the Arabidopsis lines, no visible changes in plant growth or development were detected (Supplemental Fig. S2A; J. Morris, unpublished data). However, lack of an AtCCX3-specific antibody prevented actual quantification of alterations of AtCCX3 protein amounts. 35S::AtCCX3 Arabidopsis plants treated with exogenous NaCl accumulated 35% more Na+ compared with controls (26,490 ± 370 µg g–1 dry weight for 35S::AtCCX3, 17,305 ± 2,145 µg g–1 dry weight for controls). In contrast, when grown under normal conditions, there was only a modest Na+ accumulation in 35S::AtCCX3 lines (6,044 ± 55 µg g–1 for 35S::AtCCX3, 5,772 ± 73 µg g–1 for controls).
To determine the in planta K+ transport properties of AtCCX3, direct 86Rb uptake assays into whole plants and vacuole-enriched vesicles isolated from Arabidopsis roots were assayed (Pittman et al., 2004a
We also tested the inhibition of 86Rb uptake by competition with excess (300 µM) nonlabeled cation chlorides. Similar to our results in yeast, excess KCl and NaCl reduced 86Rb uptake, while CaCl2 and ZnCl2 had no effect on 86Rb uptake into membranes isolated from cells expressing AtNHX1 and AtCCX3 (Fig. 7B). However, excess MnCl2 reduced the uptake of 86Rb by 57% in membranes from 35S::AtCCX3-expressing membranes but showed no inhibition of 86Rb uptake in AtNHX1-expressing membranes (Fig. 7B). These transport measurements again suggest that AtCCX3 has a role in Na+, K+, and Mn2+ homeostasis in planta. The Arabidopsis AtCCX3 and AtsCCX3 were also heterologously expressed in tobacco (KY14 variety). As shown in Figure 8C , AtCCX3 RNA accumulated in all 35S::AtCCX3 transgenic lines. The inability to detect transcript in the vector lines indicates the specificity of the primers used during the amplification process. Visible alterations in plant growth were readily apparent in the 35S::AtCCX3-expressing lines (Fig. 8C). After 3 weeks of growth in sterile conditions, 100% (17 of 17) of the primary transformants expressing 35S::AtCCX3 formed leaves with small yellowing necrotic lesions (Fig. 8A). After being transferred to soil, the lines appeared to partially recover for a period of 3 to 5 d. After 1 week, these phenotypes reoccurred in all 17 of the primary transformants; however, the roots of these plants did not show altered growth. As shown in Figure 8, A and B, after 3 months, all of the 35S::AtCCX3-expressing plants were severely stunted. The 35S::AtCCX3 transgenic lines with the least dramatic growth changes always displayed low levels of 35S::AtCCX3 expression (data not shown). In contrast to these dramatic phenotypes, the 12 35S::AtsCCX3-expressing lines displayed phenotypes indistinguishable from the vector-expressing controls. Because the 35S::AtCCX3 phenotypes were so dramatic, we repeated the transformation process and obtained identical results in a replicate experiment (data not shown).
35S::AtCCX3 lines were selected for further study on the basis of their T1 phenotype and their ability to make seeds. All lines analyzed that displayed the altered morphology were fertile (n = 13). The same growth abnormalities revisited all of the lines in the second generation. When grown from seed in tissue culture, the T2 plants appeared normal and unperturbed for the first 2 weeks, after which time the leaves began to display altered growth phenotypes (data not shown). T2 35S::AtCCX3-transformed plants that were sown and grown in the greenhouse also displayed leaf symptoms after 3 weeks of growth (Fig. 8B). Once again, none of the 35S::AtsCCX3- or vector control-expressing plants displayed these phenotypes.
The symptoms of the 35S::AtCCX3-expressing tobacco plants could not be phenocopied in vector control lines under any growth conditions tested (excess and depleted Na+, Mg2+, K+, Mn2+, and Ca2+; data not shown). Primary transformants and T2 35S::AtCCX3-expressing plants displayed altered morphology regardless of the medium used for growth. Conceivably, constitutive AtCCX3 expression may alter various mineral levels simultaneously, making suppression of the phenotypes dependent on the addition or subtraction of multiple components. To ascertain whether 35S::AtCCX3 expression altered ion content, we measured the total accumulation of ions in both mature and young leaves. In 35S::AtCCX3-expressing plants, young leaves accumulated at least 40% more K+ and Na+ (Fig. 9A ) compared with control lines and maintained these increased levels for K+ and Na+, even as the leaves matured (Fig. 9B). Mn2+ levels also increased as the plant leaves matured. One explanation for these growth defects is that the alterations in cellular Mn2+ and other cations may produce excess reactive oxygen species. To test this, we isolated total leaf protein from vector- and 35S::AtCCX3-expressing plants and detected the carbonyl content of the proteins. As shown in Supplemental Figure S3A, the protein carbonyl content was higher in 35S::AtCCX3-expressing plants compared with vector controls and AtsCCX3-expressing lines. In fact, these alterations were detectable before the onset of morphological changes in leaf architecture. Together, these findings suggest that AtCCX3 has a role in ion homeostasis in plants and that when AtCCX3 expression is heightened, increases in protein oxidation occur.
The plant vacuole is a cation depot, and numerous transporters have been proposed to mediate influx and efflux from this endomembrane compartment (Marty, 1999
Phylogenetic analysis recently identified five Arabidopsis CCX transporters as being closely related to mammalian K+-dependent Na+/Ca2+ exchangers (Supplemental Fig. S1A; Shigaki et al., 2006
Our data show that AtCCX3 and AtCCX4 have functions distinct from AtNHX1. Results from transport assays in yeast are consistent with the phylogenetic analysis and indicate a possible Na+/K+ transport function for AtCCX3 and AtCCX4 (Fig. 1; Shigaki et al., 2006
AtCCX3- and AtCCX4-expressing yeast cells did not completely phenocopy AtNHX1-expressing yeast cells. AtCCX3- and AtCCX4-expressing cells could not suppress the hygromycin sensitivity of nhx1-deficient cells (data not shown; Nass and Rao, 1998
Our other yeast data further support AtCCX3 and AtCCX4 having biochemical functions distinct from CAX transporters. For example, N-terminal truncations of AtCAX1 and AtCAX2 suppress the Ca2+ sensitivity of yeast cells defective in vacuolar Ca2+ transport (Hirschi et al., 1996
Functional epitope tags of AtCCX3 demonstrated that AtCCX3 localized to the endomembrane in both yeast and plants (Figs. 4 and 5). Furthermore, AtCCX3 appeared to function at the yeast vacuolar membrane as a cation transporter (Figs. 1 and 2). Whether AtCCX3 is localized exclusively on the plant vacuole or also on the trans-Golgi network and prevacuolar compartment is unclear at this time.
Although the precise role of AtCCX3 is still unclear, low AtCCX3 expression levels suggest that AtCCX3 might have a role in cation uptake in a specific subset of cells rather than be involved in bulk cation uptake (Fig. 6). Furthermore, the localization of AtCCX3 to the plant vacuole, and possibly other endomembrane compartments, combined with expression in floral tissue (Supplemental Fig. S2, A and B; publicly available microarray data) propose possible functions associated with the pollen vacuole during tube elongation and polarized tip growth (Cheung et al., 2003
AtCCX3 and AtCCX4 may function in concert with numerous other transporters to regulate pollen growth. The atccx3 and atccx4 lines displayed no altered pollen phenotypes, and general plant growth appeared robust in all our assays (Supplemental Fig. S2, B and C; data not shown). This lack of altered growth could be related to the expression of other AtCCX transporters during vegetative and pollen development (Sze et al., 2004
The strong phenotype resulting from overexpression of AtCCX3 in tobacco indicates that AtCCX3 must be carefully modulated. Tobacco plants ectopically expressing 35S::AtCCX3 were stunted in growth and contained necrotic lesions in the leaf interveinal regions (Fig. 8A). These tobacco phenotypes differentiate AtCCX3 from both AtCAX1- and AtNHX1-overexpressing phenotypes. The AtCCX3 phenotypes were not observed in plants expressing AtsCCX3 (Fig. 8A). In contrast, ectopic expression of AtsCAX1 in tobacco produces dramatic phenotypes (Hirschi, 1999
Although no phenotypes related to changes in Mn2+ concentrations could be observed in Arabidopsis either lacking or expressing 35S::AtCCX3, the Mn2+ inhibition of 86Rb uptake in vacuole-enriched vesicles suggests that AtCCX3 has a role in Mn2+ homeostasis (Fig. 7B). This lack of whole plant phenotypes could be related to functional redundancy that may prohibit fluctuations in Mn2+ content that could cause deleterious phenotypes in Arabidopsis (Pittman et al., 2004a
AtCCX3 function may be related to plant reactive oxygen species signaling (Supplemental Fig. S3). Indeed, tobacco plants expressing 35S::AtCCX3 showed much higher oxidation of proteins compared with controls (Supplemental Fig. S3). The drastic phenotypes observed in 35S::AtCCX3 tobacco lines may be due to the perturbation of transient metal concentrations in AtCCX3-expressing tobacco lines (Figs. 8 and 9). Regulation of metal concentrations is essential for plant antioxidant systems (Halliwell and Gutteridge, 2006
In summary, we have characterized what are to our knowledge the first CCX transporters from plants. We demonstrate that AtCCX3 resides predominantly on an endomembrane and may function as an H+-dependent K+ transporter that can also transport Na+ and Mn2+. The ability to transport both monovalent and divalent cations will need to be directly demonstrated, although it is analogous to yeast SMF1, which transports Fe2+ and is permeable by Na+, Li+, and K+ (Chen et al., 1999
See Supplemental Table S1 for primer information.
AtCCX3 and AtCCX4 were amplified from Arabidopsis (Arabidopsis thaliana) genomic DNA using PCR. Both AtCCX3 and AtCCX4 are predicted to have no introns. The primers are listed in Supplemental Table S1 (primers 1–5).
AtCCX3, AtsCCX3, and AtCCX4 cDNAs were subcloned into the yeast expression vector piHGpd (Nathan et al., 1999
The AtsCAX2 plasmid was cloned previously (Shigaki et al., 2003
The AtCCX3 and AtsCCX3 ORFs were cloned into a modified pBIN19 vector (Dr. Toshiro Shigaki, Clontech, personal communication). The resulting constructs contained the cauliflower mosaic virus 35S promoter fragment driving expression of the transporters and the NOS terminator (Hull et al., 2000
The triple HA epitope-tagged AtCCX3 (HA-AtCCX3) was constructed as described previously (Shigaki et al., 2001
The C-terminal GFP tag AtCCX3 (CCX3-GFP) was constructed as described previously (Cheng et al., 2004
The following Saccharomyces cerevisiae yeast strains were used in this study: W303-1A (MATa ade2-1 can1-100 his3-11,15 leu2-3, 112 trp1-1 ura3-1; Wallis et al., 1989
Yeast culture conditions and sample processing were modified from previous studies (Lahner et al., 2003
Arabidopsis ecotype Columbia was used as the wild type. Agrobacterium tumefaciens GV3101 was transformed with AtCCX3, AtsCCX3, or vector controls (Sambrook et al., 1989
Arabidopsis seeds expressing 35S:AtCCX3 were planted on half-strength Murashige and Skoog (MS) + 1% Suc plates and grown for 10 d. Plants were transferred to soil and watered with 100 mL of 50 mM NaCl twice weekly. Plants were harvested at 35 d of age, dried at 68°C, and ground. Tobacco seeds were germinated on half-strength MS + 3% Suc and grown for 2 weeks, then they were transferred to soil. At 28 and 40 d of age, leaves were removed, dried at 68°C, and ground. Inductively coupled plasma (ICP) analysis was done as described previously (Franson, 1989
A yeast strain (wx1) expressing AtCCX3, AtNHX1, and vector were grown for 16 h in AP selection medium, and membrane vesicles were isolated as described previously (Pittman and Hirschi, 2001
Time-dependent 86Rb+ uptake measurements into membrane vesicles were performed as described previously (Venema et al., 2002
Total protein was isolated from yeast expressing HA-AtCCX3 using the glass bead method (Ausubel et al., 1998
Microsomal membranes were prepared from AtCCX3-GFP-expressing Arabidopsis leaf tissues as described previously (Cheng et al., 2003
Single epidermis layers were removed from white onion (Allium cepa) bulb and placed on the surface of a MS plate (Murashige and Skoog, 1962
RNA was isolated using the RNeasy Plant Kit (Qiagen) according to the instructions of the manufacturer. RT-PCR was performed to detect mRNA transcript in Arabidopsis of AtCCX3 and AtCCX4 knockout lines, Arabidopsis plants overexpressing AtCCX3 and AtsCCX3, and tobacco plants ectopically expressing AtCCX3 and AtsCCX3. One microliter of the first-strand cDNA was used to amplify an AtCCX3 gene-specific fragment and an Actin1 fragment (Geisler et al., 2000
To isolate ccx3 and ccx4 null alleles, two T-DNA insertional lines were obtained from the SAIL T-DNA insertion collection (Sessions et al., 2002
At 14 d of age, 25 plants were transferred to control medium or medium supplemented with 100 mM KCl, 50 mM NaCl, or 1 µM MnCl2. After 24 h, the plants were harvested and total plant RNA was extracted using the RNeasy Plant Kit (Qiagen). For floral RNA, 25 plants were transferred to soil and watered weekly with 50 mL of 100 mM KCl, 50 mM NaCl, or 1 µM MnCl2 solution. RNA was extracted using the RNeasy Plant Kit (Qiagen). Serial dilutions of RNA were made from 5 µg to 5 ng, and first-strand cDNA was synthesized as described previously (Geisler et al., 2000
Carbonyl assays for the analysis of oxidized proteins in plant cells were performed as described previously (Levine et al., 1994 Sequence data from this article can be found in the GenBank/EMBL data libraries under accession numbers AtCCX3: NM_112262 and AtCCX4: NM_104289.
The following materials are available in the online version of this article.
We thank Dr. Ramon Gonzalez for providing AtNHX1 in pDR196. We thank Bronwyn Barkla and Heven Sze for critical reading of the manuscript. We also thank Adam Gillum for his help with the preparation of the figures. Received May 8, 2008; accepted August 30, 2008; published September 5, 2008.
1 This work was supported by the U.S. Department of Agriculture/Agricultural Research Service (Cooperative Agreement no. 58–62650–6001), the National Science Foundation (grant nos. NSF 0344350 and NSF 020977), and the U.S. Department of Agriculture Cooperative State Research, Education, and Extension Service (grant no. 2005–34402–17121 to K.D.H.). The National Science Foundation (grant no. 0209792) funded work in the laboratory of J.M.W. The author responsible for distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (www.plantphysiol.org) is: Kendal D. Hirschi (kendalh{at}bcm.tmc.edu).
[W] The online version of this article contains Web-only data.
[OA] Open Access articles can be viewed online without a subscription. www.plantphysiol.org/cgi/doi/10.1104/pp.108.118810 * Corresponding author; e-mail kendalh{at}bcm.tmc.edu.
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