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First published online July 10, 2009; 10.1104/pp.109.140699 Plant Physiology 151:323-333 (2009) © 2009 American Society of Plant Biologists OPEN ACCESS ARTICLE
Arabidopsis Separase Functions beyond the Removal of Sister Chromatid Cohesion during Meiosis1,[OA]Department of Chemistry and Biochemistry, Miami University, Oxford, Ohio 45056
Separase is a capase family protease that is required for the release of sister chromatid cohesion during meiosis and mitosis. Proteolytic cleavage of the -kleisin subunit of the cohesin complex at the metaphase-to-anaphase transition is essential for the proper segregation of chromosomes. In addition to its highly conserved role in cleaving the -kleisin subunit, separase appears to have acquired additional diverse activities in some organisms, including involvement in mitotic and meiotic anaphase spindle assembly and elongation, interphase spindle pole body positioning, and epithelial cell reorganization. Results from the characterization of Arabidopsis (Arabidopsis thaliana) separase (ESP) demonstrated that meiotic expression of ESP RNA interference blocked the proper removal of cohesin from chromosomes and resulted in the presence of a mixture of fragmented chromosomes and intact bivalents. The presence of large numbers of intact bivalents raised the possibility that separase may also have multiple roles in Arabidopsis. In this report, we show that meiotic expression of ESP RNA interference blocks the removal of cohesin during both meiosis I and II, results in alterations in nonhomologous centromere association, disrupts the radial microtubule system after telophase II, and affects the proper establishment of nuclear cytoplasmic domains, resulting in the formation of multinucleate microspores.
The proper segregation of chromosomes during mitosis and meiosis is dependent on the systematic formation and subsequent removal of sister chromatid cohesion, which is required for homologous chromosome pairing, recombination, and repair (for review, see Onn et al., 2008
The establishment of sister chromatid cohesion in yeast involves a multistep process (Milutinovich et al., 2007
Studies on the distribution of cohesin proteins during meiosis in a number of organisms, including yeast, Caenorhabditis elegans, mammals, and Arabidopsis (Arabidopsis thaliana), have shown that similar to the situation during mitosis in animal cells, a significant amount of cohesin is either removed from or redistributed on prophase chromosomes in a separase-independent process (Pasierbek et al., 2001
In addition to its highly conserved role in cleaving the
Results from the characterization of Arabidopsis separase suggested that the protein also has multiple roles in plants (Liu and Makaroff, 2006 In this report, we show that meiotic expression of ESP RNAi blocks the release of sister chromatid cohesion during both meiosis I and II, results in nonhomologous centromere association, disrupts the radial microtubule system (RMS) after telophase II, and affects the proper establishment of nuclear cytoplasmic domains. Unlike the large majority of plant meiotic mutants that have been characterized to date, reduction of ESP levels during meiosis leads to the formation of multinucleate microspores.
ESP Is Essential for Sister Chromatid Separation during Anaphase II
We previously showed that DMC1-driven expression of ESP-RNAi interferes with the separation of chromosomes during anaphase I and II (Liu and Makaroff, 2006 The 4',6-diamino-phenylindole (DAPI)-stained spreads of meiotic chromosomes from ESP RNAi, ask1-1, and ESP RNAi; ask1-1 plants were prepared and analyzed. Chromosome condensation and the pairing of homologous chromosomes appeared relatively normal during leptotene, zygotene (data not shown), and pachytene (Fig. 1A ) in ESP RNAi plants. However, we did observe that most pachytene-staged meiocytes in ESP RNAi plants contained fewer bright DAPI-stained areas than wild-type meiocytes at the same stage. Usually four to six brightly stained heterochromatin regions, including five centromeric and one nucleolar organizer region, are observed in wild-type meiocytes during pachytene. In contrast, we typically observed between one and three heterochromatin regions in ESP RNAi meiocytes at the same stage (Fig. 1A), suggesting that there is a higher frequency of nonhomologous centromere association in these cells. However, five bivalents were observed at diakinesis (Fig. 1B) and metaphase I (Fig. 1C), indicating that the association of nonhomologous centromeres is transient. During anaphase I, homologous chromosomes failed to separate properly, resulting in the presence of chromosomes stretched between the two spindle poles in most cells (Fig. 1D). Cells containing five bivalents were frequently observed at metaphase II (Fig. 1M). Stretched bivalents were again observed at anaphase II (Fig. 1N). A number of cells were observed containing nonseparated bivalents at telophase II (Fig. 1O), suggesting that the homologous chromosomes either never attached to the spindle or were pulled to one side of the cell due to the persistent presence of sister chromatid cohesion. Polyads, some of which appeared to contain microspores with multiple nuclei (Fig. 1P), were produced after cytokinesis.
Meiotic chromosomes in ESP RNAi; ask1-1 plants generally resembled the ask1-1 mutant prior to anaphase II. Homologous chromosomes failed to pair properly during prophase I in ask1-1 (Fig. 1, E and F) and ESP RNAi; ask1-1 plants (Fig. 1, I and J), with 10 univalents typically observed during metaphase I in both plants (Fig. 1, G and K). Homologous chromosomes randomly segregated to opposite poles during anaphase I in both ask1-1 and ESP RNAi; ask1-1 meiocytes (Fig. 1, H and L), resulting in an uneven distribution of chromosomes at metaphase II (Fig. 1, Q and U). Chromosome bridges were not observed in meiocytes of ask1-1 or ESP RNAi; ask1-1 plants at anaphase I. In contrast to the random segregation of chromosomes during anaphase II in ask1-1 plants (Fig. 1R), meiocytes of ESP RNAi; ask1-1 plants contained stretched sister chromatids at anaphase II (Fig. 1V), indicating that persistent cohesion blocked sister chromatid segregation. This phenotype is similar to what is observed in ESP RNAi plants (Fig. 1D). At telophase II, variable groups of chromosomes were observed in both ask1-1 and ESP RNAi; ask1-1 mutant meiocytes (Fig. 1, S and W). A number of polyads containing microspores with multiple nuclei were produced after cytokinesis in ESP RNAi; ask1-1 plants (Fig. 1X). Microspores with multiple nuclei were never observed in the ask1-1 mutant (Fig. 1T). These results confirm that ESP is required for the removal of cohesin during both meiosis I and II and demonstrate that ask1-1 is epistatic to ESP prior to anaphase II. They also suggest that expression of ESP RNAi affects meiotic heterochromatin during prophase I and ultimately the proper establishment of nuclear domains following cytokinesis.
The observation that meiocytes expressing ESP RNAi exhibited a reduced number of heterochromatin regions suggested that ESP may function earlier than anaphase I. In order to further investigate this possibility, fluorescence in situ hybridization (FISH) experiments were conducted using the 180-bp repetitive centromere fragment as a probe on meiocytes of wild-type, ask1-1, ESP RNAi, and ESP RNAi; ask1-1 plants, and the number of CEN signals at pachytene were compared. Two to five CEN signals were observed in wild-type meiocytes at pachytene, with most cells containing four or five signals (Fig. 2 ). Pachytene cells with four (27.5%) or five (66.7%) CEN signals accounted for >94% of the wild-type meiocytes observed (n = 69), and cells with a single CEN signal were never observed. Pachytene stage meiocytes in ESP RNAi transgenic plants were also found to have between two and five CEN signals; however, most of the cells contained less than three signals (Fig. 2). Meiocytes with one (21%), two (44%), and three (20%) CEN signals accounted for 85% of the total ESP RNAi cells observed (n = 61). Meiocytes of ask1-1 plants, which exhibit defects in homologous chromosome pairing, contained approximately eight (three to 10) centromere signals throughout prophase I (Fig. 2). Interestingly, ESP RNAi; ask1-1 plants most closely resembled ESP RNAi plants. While meiocytes with between one and eight CEN signals were observed, almost 80% of the cells had four or fewer signals (average = 4.1, n = 79). Meiocytes with five (6%), six (3%), seven (5%), and eight (5%) CEN signals were also observed.
These results confirm that meiotic expression of ESP RNAi results in the nonspecific association of centromeres during pachytene. Furthermore, this association is not dependent on homologous chromosome pairing. This suggests that ESP may play a role in centromeric heterochromatin structure/formation during early meiosis.
Five CEN signals are typically observed during pachytene in wild-type meiocytes, with the number of signals gradually increasing during diplotene/diakinesis as the homologous chromosomes desynapse (data not shown; Zhao et al., 2006
In ESP RNAi meiocytes, the centromeres of homologous chromosomes typically remained closely associated at metaphase I (Fig. 3E). During anaphase I, ESP RNAi meiocytes exhibit severe chromosome stretching. We had initially assumed that the stretched regions represented homologous chromosome arms that had failed to resolve due to persistent cohesion. However, lines of discrete centromere signals were detected along the stretched chromosomes (Fig. 3, F and G), and the DNA remaining in the center of the cells was not labeled with the CEN probe, indicating that the chromosome arms remain tightly joined in the center of the cell, while the pericentromeres stretch and unravel as they are pulled to opposite poles. Consistent with this observation, it was recently shown that pericentromeric chromatin is an elastic element of the spindle that is stretched proportionally to the force applied to it (Bouck and Bloom, 2007 Later in meiosis, a mixture of large, strongly labeled and small, weakly labeled centromere signals were observed distributed throughout the cells (Fig. 3H). These most likely represent broken centromeres. Consistent with this assumption are the presence of chromosome fragments with no CEN signals (Fig. 3M). Bivalents containing a pair of closely spaced signals are also observed in some cells consistent with our prediction that some bivalents fail to separate (Fig. 2, M and N). Polyads and released microspores with irregular numbers and intensities of CEN signals were observed later in meiosis (Fig. 3, O and P). Therefore, failure to release arm cohesion during meiosis I results in stretching, unwinding, and breakage of the pericentromeric regions.
It was previously reported that the depletion of ESP results in the production of polyads containing two to nine microspores (Liu and Makaroff, 2006
A transmission electron microscopy (TEM) analysis was conducted on meiocytes from ESP RNAi plants to confirm that the microspores do in fact contain multiple intact nuclei and to possibly gain further insight into why multiple nuclei are present in some cells. Wild-type microsporocytes contain four haploid nuclei located at the cell periphery in a tetrahedral arrangement after telophase II (Fig. 5A ). Each nucleus is surrounded both by a nuclear membrane and endoplasmic reticulum (ER; Fig. 5A). The onset of cytokinesis is first observed as small ingrowths of callose that are deposited between the nuclei demarking future microspore domains (Fig. 5B). After cytokinesis has taken place, the four haploid microspores are tetrahedrally arranged and encased in a thick callose wall. Usually only two or three microspores with their respective nuclei are visible in a section (Fig. 5C). After callose wall dissolution, the microspores are released, increase in size, and start depositing a sporopollenin wall. At this stage the nucleus is centrally positioned (Fig. 5D).
Following telophase II and prior to the onset of cytokinesis in ESP RNAi meiocytes, the coenocytic microsporocytes contain an abnormal arrangement of nuclei (Fig. 5, E and F). In many cases, instead of the nuclei localizing to the cell periphery in a tetrahedral arrangement, the nuclei were observed to group together. In all instances, adjacent nuclei had their own nuclear membranes, but shared a common layer of ER (Fig. 5, E–H). Ingrowths of the callose wall again marked the onset of cytokinesis, but in many instances, these did not correspond to a single nuclear domain. After cytokinesis, microspores containing multiple nuclei, which were always in close proximity, were observed (Fig. 5I). The multiple nuclei in newly released microspores remained encircled with a common ER network (Fig. 5J).
The presence of bivalents followed by the presence of mispositioned nuclei after telophase II raised the possibility that reduction/elimination of ESP in meiocytes may affect the spindle and/or microtubule network. In order to investigate this possibility, we performed immunolocalization studies on wild-type and ESP RNAi meiocytes using an antibody against β-tubulin. No significant differences were observed in β-tubulin staining patterns between wild-type and ESP RNAi plants prior to metaphase I. At metaphase I, the spindle structures in ESP RNAi meiocytes exhibited a typical bipolar configuration similar to those of wild-type cells (data not shown; Lam et al., 2005
Separase and Chromosome Disjunction
We previously showed that depletion of ESP in wild-type plants interferes with the normal segregation of homologous chromosomes during anaphase I and sister chromatids at anaphase II (Liu and Makaroff, 2006 It is generally assumed that separase is required for the release of cohesion at both metaphase I and II. However, it is possible that defects in sister chromatid segregation during meiosis II could result in part from the aberrant homolog separation that occurs at anaphase I. We show in this report that depletion of ESP in ask1-1 plants, which are defective in homologous chromosome synapsis and contain a mixture of univalents and abnormal bivalents at metaphase I, blocks sister chromatid separation during anaphase II (Fig. 4V), thereby clearly demonstrating the involvement of ESP in the release of cohesion during both anaphase I and II.
While studies in a wide range of organisms have shown that separase is essential for the release of sister chromatid cohesion, differences in the removal of cohesin complexes have also been observed (for review, see Queralt and Uhlmann, 2005
While separase appears to be universally responsible for chromosome disjunction at anaphase, a number of organism-specific separase-dependent functions have also been reported. These include mitotic anaphase spindle assembly and elongation (Jensen et al., 2001 In this report, we show that reduction/elimination of ESP during meiosis results in a number of cellular defects in addition to blocking chromosome disjunction. Specifically, we observe that meiotic expression of ESP RNAi (1) results in alterations in nonhomologous centromere association, (2) disrupts the RMS and in some telophase II meiocytes converts it to phragmoplast-like structures, and (3) affects the proper establishment of nuclear cytoplasmic domains that leads to the formation of multinucleate microspores.
DAPI-stained spreads of meiotic chromosomes and centromere FISH experiments both demonstrated a prolonged, nonspecific association of centromeres during prophase in ESP meiocytes. In wild-type meiocytes, a transient clustering and aggregation of chromocenters is typically observed during zygotene (Armstrong et al., 2001
In contrast to the situation in yeast, separase is not required for normal meiotic spindle formation in Arabidopsis. With the exception of the presence of multiple spindles in some meiocytes, spindle formation appeared relatively normal in ESP RNAi meiocytes. While some broadening of the spindles was observed, which presumably results from alterations in chromosome segregation caused by persistent cohesion, relatively normal spindles were observed during meiosis I and II in ESP RNAi plants. This is in contrast to the alterations in spindle formation observed during meiosis in yeast (Jensen et al., 2001
Although separase is not required for meiotic spindle formation in Arabidopsis, it is necessary for proper formation of the RMS, which is formed as part of the reorganization of the spindle at the end of meiosis II. The RMS is a microtubule network that emanates from the surface of each microspore nucleus and extends throughout each nuclear cytoplasmic domain of the nascent tetrad during cytokinesis (Fig. 6B). The RMS plays a pivotal role in defining cytoplasmic boundaries and the position of cell wall formation (Brown and Lemmon, 2001
The RMS alterations that we observe in ESP-RNAi plants are likely related, either directly or indirectly, to the generation of microspores with multiple nuclei. During the normal progression of meiosis and cytokinesis, a nuclear membrane and sheet of ER surround each of the four clusters of chromosomes, which are arranged in a tetrahedral organization. Each nucleus then establishes a radial network of microtubuli that coalesce forming miniphragmoplasts that define the division planes and demark the locations for microspore cell wall formation (Yang et al., 2003a In ESP RNAi meiocytes, multiple groups of partially dispersed chromosomes are present with a nuclear membrane forming around each of them. Some of the nuclei remain adjacent to one another and share a common sheet of ER. These adjacent nuclei act as a unit and are packaged into a single microspore. Adjacent nuclei may arise if a spindle did not form between two groups of chromosomes during meiosis II or if the chromosomes can't be separated by the spindle. While relatively normal looking spindles are found in ESP RNAi meiocytes, we did observe that spindles do not form on some chromosomes (Fig. 6, C and E). Adjacent nuclei often exhibit the greatest alterations in the RMS. Therefore, it is possible that the absence of ESP affects spindle formation on some chromosomes, which ultimately results in multinucleate microspores.
In yeast, separase is known to stabilize the dynamics of spindle microtubules at the onset of anaphase and to participate in the FEAR mitotic exit pathway (Stegmeier et al., 2002
Very little is currently known about the factors that control microtubule pattern formation during meiosis. A mutation in the Arabidopsis kinesin gene, TETRASPORE (TES)/STUD/NACK2 has been described that results in microtubules that do not organize into a radial system, do not extend to the surface of adjacent nuclei, and fail to establish stable boundaries for nuclear cytoplasmic domains (Yang et al., 2003a In summary, ESP appears to play a number of roles during meiosis in Arabidopsis in addition to its highly conserved role in the release of sister chromatid cohesion. It is required for the proper establishment and organization of the RMS and defining nuclear/cytoplasmic boundaries. It also appears to play a role in the association of centromere regions of nonhomologous chromosomes. At this time, it is not clear if ESP plays a direct or indirect role in these processes, if the defects we observe are the result of the absence of separase protease activity, or if ESP has other activities. Additional studies are necessary to investigate these questions and further explore the roles of separase in plant cells.
Plant Material and Growth Conditions Seeds of wild-type Arabidopsis (Arabidopsis thaliana), ask1-1, ESP RNAi, and ESP RNAi; ask1-1 plants were sterilized in 70% ethanol and grown on a commercial potting mix in a growth chamber at 22°C with a 16-h-light/8-h-dark cycle. Buds at appropriate stages during meiosis were collected from prebolting plants, fixed, and analyzed as described below. ESP RNAi transgenic plants were initially identified by BASTA selection, and the presence of the transgene was then confirmed by PCR. Plants defective in both ASK1 and ESP expression were generated by crossing ask1-1 homozygous plants with ESP RNAi transgenic plants. F2 plants from the crosses were screened with Basta, and ask1-1 plants containing the RNAi construct were identified by performing PCR analysis on sterile plants using primers specific for ASK1, ask1-1, and the ESP RNAi construct.
Meiosis in the transgenic lines was examined and compared to that in wild-type plants using DAPI-stained meiotic chromosome spreads (Ross et al., 1996
Staged buds, which were fixed in acetic alcohol (ethanol:acetic acid, 3:1 [v/v]) for 2 h at room temperature and stored at –20°C, were subjected to FISH as previously published (Yang et al., 2006
A TEM analysis of microsporogenesis was conducted as described (Owen and Makaroff, 1995 Sequence data from this article can be found in the GenBank/EMBL data libraries under accession number AY823256.
We thank members of the Makaroff Lab for helpful discussions and critical reading of the manuscript. Received May 1, 2009; accepted June 28, 2009; published July 10, 2009.
1 This research was supported by the National Science Foundation (grant nos. MCB0322171 and MCB0718191 to C.A.M.).
2 Present address: Genetics and Biochemistry Branch, The National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, 5 Memorial Road, Building 5/209, Bethesda, MD 20892.
3 Present address: Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine, Rochester, MN 55905. The author responsible for distribution of materials integral to the findings presented in this article in accordance with the policy described in the Instructions for Authors (www.plantphysiol.org) is: Christopher A. Makaroff (makaroca{at}muohio.edu).
[OA] Open access articles can be viewed online without a subscription. www.plantphysiol.org/cgi/doi/10.1104/pp.109.140699 * Corresponding author; e-mail makaroca{at}muohio.edu.
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