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Plant Physiol, December 2002, Vol. 130, pp. 2129-2141

Transcriptome Changes for Arabidopsis in Response to Salt, Osmotic, and Cold Stress1,[w]

Joel A. Kreps, Yajun Wu, Hur-Song Chang, Tong Zhu, Xun Wang, and Jeff F. Harper*

Torrey Mesa Research Institute, Syngenta, 3115 Merryfield Row, San Diego, California 92121 (J.A.K., Y.W., H.-S.C., T.Z., X.W.); and The Scripps Research Institute, 10550 North Torrey Pines, San Diego, California 92037 (J.F.H.)

To identify genes of potential importance to cold, salt, and drought tolerance, global expression profiling was performed on Arabidopsis plants subjected to stress treatments of 4°C, 100 mM NaCl, or 200 mM mannitol, respectively. RNA samples were collected separately from leaves and roots after 3- and 27-h stress treatments. Profiling was conducted with a GeneChip microarray with probe sets for approximately 8,100 genes. Combined results from all three stresses identified 2,409 genes with a greater than 2-fold change over control. This suggests that about 30% of the transcriptome is sensitive to regulation by common stress conditions. The majority of changes were stimulus specific. At the 3-h time point, less than 5% (118 genes) of the changes were observed as shared by all three stress responses. By 27 h, the number of shared responses was reduced more than 10-fold (< 0.5%), consistent with a progression toward more stimulus-specific responses. Roots and leaves displayed very different changes. For example, less than 14% of the cold-specific changes were shared between root and leaves at both 3 and 27 h. The gene with the largest induction under all three stress treatments was At5g52310 (LTI/COR78), with induction levels in roots greater than 250-fold for cold, 40-fold for mannitol, and 57-fold for NaCl. A stress response was observed for 306 (68%) of the known circadian controlled genes, supporting the hypothesis that an important function of the circadian clock is to "anticipate" predictable stresses such as cold nights. Although these results identify hundreds of potentially important transcriptome changes, the biochemical functions of many stress-regulated genes remain unknown.

1 This work was supported by the Department of Energy (grant no. DE-FG03-94ER20152 to J.F.H.), by the National Science Foundation (grant no. DBI-0077378 to J.F.H.), and by the Torrey Mesa Research Institute (to J.F.H.).

[w] The online version of this article contains Web-only data. The supplemental material is available at www.plantphysiol.org.

* Corresponding author; e-mail Harper{at}Scripps.edu; fax 858-784-2862.

© 2002 American Society of Plant Biologists


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[Abstract] [Full Text] [PDF]

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[Abstract] [Full Text] [PDF]

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J. Dong, S. T. Kim, and E. M. Lord
Plantacyanin Plays a Role in Reproduction in Arabidopsis
Plant Physiology, June 1, 2005; 138(2): 778 - 789.
[Abstract] [Full Text] [PDF]

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 Crop Sci.Home page
V. Chinnusamy, A. Jagendorf, and J.-K. Zhu
Understanding and Improving Salt Tolerance in Plants
Crop Sci., January 31, 2005; 45(2): 437 - 448.
[Abstract] [Full Text] [PDF]

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 J Exp BotHome page
E. H. Murchie, S. Hubbart, S. Peng, and P. Horton
Acclimation of photosynthesis to high irradiance in rice: gene expression and interactions with leaf development
J. Exp. Bot., January 1, 2005; 56(411): 449 - 460.
[Abstract] [Full Text] [PDF]

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 Plant Cell PhysiolHome page
T. Nanjo, N. Futamura, M. Nishiguchi, T. Igasaki, K. Shinozaki, and K. Shinohara
Characterization of Full-length Enriched Expressed Sequence Tags of Stress-treated Poplar Leaves
Plant Cell Physiol., December 15, 2004; 45(12): 1738 - 1748.
[Abstract] [Full Text] [PDF]

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 Plant Physiol.Home page
F. Kaplan, J. Kopka, D. W. Haskell, W. Zhao, K. C. Schiller, N. Gatzke, D. Y. Sung, and C. L. Guy
Exploring the Temperature-Stress Metabolome of Arabidopsis
Plant Physiology, December 1, 2004; 136(4): 4159 - 4168.
[Abstract] [Full Text] [PDF]

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 Proc. Natl. Acad. Sci. USAHome page
J. Browse and B. M. Lange
Counting the cost of a cold-blooded life: Metabolomics of cold acclimation
PNAS, October 19, 2004; 101(42): 14996 - 14997.
[Full Text] [PDF]

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 Proc. Natl. Acad. Sci. USAHome page
D. Cook, S. Fowler, O. Fiehn, and M. F. Thomashow
From The Cover: A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis
PNAS, October 19, 2004; 101(42): 15243 - 15248.
[Abstract] [Full Text] [PDF]

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 J. Biol. Chem.Home page
M. Boudsocq, H. Barbier-Brygoo, and C. Lauriere
Identification of Nine Sucrose Nonfermenting 1-related Protein Kinases 2 Activated by Hyperosmotic and Saline Stresses in Arabidopsis thaliana
J. Biol. Chem., October 1, 2004; 279(40): 41758 - 41766.
[Abstract] [Full Text] [PDF]

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 Plant Physiol.Home page
T. J. Panikulangara, G. Eggers-Schumacher, M. Wunderlich, H. Stransky, and F. Schoffl
Galactinol synthase1. A Novel Heat Shock Factor Target Gene Responsible for Heat-Induced Synthesis of Raffinose Family Oligosaccharides in Arabidopsis
Plant Physiology, October 1, 2004; 136(2): 3148 - 3158.
[Abstract] [Full Text] [PDF]

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 Plant Physiol.Home page
A. J. Liska, A. Shevchenko, U. Pick, and A. Katz
Enhanced Photosynthesis and Redox Energy Production Contribute to Salinity Tolerance in Dunaliella as Revealed by Homology-Based Proteomics
Plant Physiology, September 1, 2004; 136(1): 2806 - 2817.
[Abstract] [Full Text] [PDF]

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 Plant Physiol.Home page
H. Sze, S. Padmanaban, F. Cellier, D. Honys, N.-H. Cheng, K. W. Bock, G. Conejero, X. Li, D. Twell, J. M. Ward, et al.
Expression Patterns of a Novel AtCHX Gene Family Highlight Potential Roles in Osmotic Adjustment and K+ Homeostasis in Pollen Development
Plant Physiology, September 1, 2004; 136(1): 2532 - 2547.
[Abstract] [Full Text] [PDF]

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 Plant Physiol.Home page
F. Kaplan and C. L. Guy
{beta}-Amylase Induction and the Protective Role of Maltose during Temperature Shock
Plant Physiology, July 1, 2004; 135(3): 1674 - 1684.
[Abstract] [Full Text] [PDF]

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 Proc. Natl. Acad. Sci. USAHome page
J. Zhu, H. Shi, B.-h. Lee, B. Damsz, S. Cheng, V. Stirm, J.-K. Zhu, P. M. Hasegawa, and R. A. Bressan
An Arabidopsis homeodomain transcription factor gene, HOS9, mediates cold tolerance through a CBF-independent pathway
PNAS, June 29, 2004; 101(26): 9873 - 9878.
[Abstract] [Full Text] [PDF]

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 Plant Cell PhysiolHome page
Y. Kasukabe, L. He, K. Nada, S. Misawa, I. Ihara, and S. Tachibana
Overexpression of Spermidine Synthase Enhances Tolerance to Multiple Environmental Stresses and Up-Regulates the Expression of Various Stress-Regulated Genes in Transgenic Arabidopsis thaliana
Plant Cell Physiol., June 15, 2004; 45(6): 712 - 722.
[Abstract] [Full Text] [PDF]

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 J Exp BotHome page
A. M. Borland and T. Taybi
Synchronization of metabolic processes in plants with Crassulacean acid metabolism
J. Exp. Bot., June 1, 2004; 55(400): 1255 - 1265.
[Abstract] [Full Text] [PDF]

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 J Exp BotHome page
H. Hesse, V. Nikiforova, B. Gakiere, and R. Hoefgen
Molecular analysis and control of cysteine biosynthesis: integration of nitrogen and sulphur metabolism
J. Exp. Bot., June 1, 2004; 55(401): 1283 - 1292.
[Abstract] [Full Text] [PDF]

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 Plant Physiol.Home page
T. Eulgem, V. J. Weigman, H.-S. Chang, J. M. McDowell, E. B. Holub, J. Glazebrook, T. Zhu, and J. L. Dangl
Gene Expression Signatures from Three Genetically Separable Resistance Gene Signaling Pathways for Downy Mildew Resistance
Plant Physiology, June 1, 2004; 135(2): 1129 - 1144.
[Abstract] [Full Text] [PDF]

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 Plant Physiol.Home page
L. Rizhsky, H. Liang, J. Shuman, V. Shulaev, S. Davletova, and R. Mittler
When Defense Pathways Collide. The Response of Arabidopsis to a Combination of Drought and Heat Stress
Plant Physiology, April 1, 2004; 134(4): 1683 - 1696.
[Abstract] [Full Text] [PDF]

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 J. Biol. Chem.Home page
L. Rizhsky, S. Davletova, H. Liang, and R. Mittler
The Zinc Finger Protein Zat12 Is Required for Cytosolic Ascorbate Peroxidase 1 Expression during Oxidative Stress in Arabidopsis
J. Biol. Chem., March 19, 2004; 279(12): 11736 - 11743.
[Abstract] [Full Text] [PDF]

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 Plant CellHome page
Y. Yamauchi, M. Ogawa, A. Kuwahara, A. Hanada, Y. Kamiya, and S. Yamaguchi
Activation of Gibberellin Biosynthesis and Response Pathways by Low Temperature during Imbibition of Arabidopsis thaliana Seeds
PLANT CELL, February 1, 2004; 16(2): 367 - 378.
[Abstract] [Full Text] [PDF]

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 J Exp BotHome page
A. J. Millar
Input signals to the plant circadian clock
J. Exp. Bot., January 2, 2004; 55(395): 277 - 283.
[Abstract] [Full Text] [PDF]

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 J Exp BotHome page
N. L. Taylor, D. A. Day, and A. H. Millar
Targets of stress-induced oxidative damage in plant mitochondria and their impact on cell carbon/nitrogen metabolism
J. Exp. Bot., January 1, 2004; 55(394): 1 - 10.
[Abstract] [Full Text] [PDF]

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 Plant Physiol.Home page
M. A. Rabbani, K. Maruyama, H. Abe, M. A. Khan, K. Katsura, Y. Ito, K. Yoshiwara, M. Seki, K. Shinozaki, and K. Yamaguchi-Shinozaki
Monitoring Expression Profiles of Rice Genes under Cold, Drought, and High-Salinity Stresses and Abscisic Acid Application Using cDNA Microarray and RNA Gel-Blot Analyses
Plant Physiology, December 1, 2003; 133(4): 1755 - 1767.
[Abstract] [Full Text]

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 Mol. Endocrinol.Home page
M. J. Bailey, P. D. Beremand, R. Hammer, D. Bell-Pedersen, T. L. Thomas, and V. M. Cassone
Transcriptional Profiling of the Chick Pineal Gland, a Photoreceptive Circadian Oscillator and Pacemaker
Mol. Endocrinol., October 1, 2003; 17(10): 2084 - 2095.
[Abstract] [Full Text] [PDF]


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