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Published on April 27, 2007; 10.1104/pp.107.097980


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Received February 13, 2007
Accepted April 13, 2007

Transcriptome Analysis of Arbuscular Mycorrhizal Roots during Development of the Pre-penetration Apparatus

Valeria Siciliano , Andrea Genre , Raffaella Balestrini , Gilda Cappellazzo , Pierre J.G.M. deWit , and Paola Bonfante *

Dipartimento di Biologia Vegetale, Università di Torino and IPP-CNR. Viale Mattioli 25 - 10125 Torino, Italy; Laboratory of Phytopathology, Wageningen University, Binnenhaven 5 - 6709 PD Wageningen, The Netherlands

* Corresponding author; email: p.bonfante{at}ipp.cnr.it.

Information on changes in the plant transcriptome during early interaction with arbuscular mycorrhizal (AM) fungi is still limited since infections are usually not synchronized and plant markers for early stages of colonization are not yet available. A pre-penetration apparatus (PPA), organized in epidermal cells during appressorium development, has reported to be responsible for assembling a trans-cellular tunnel to accommodate the invading fungus (Genre et al., 2005). Here we used PPAs as markers for cell responsiveness to fungal contact in order to investigate gene expression at this early stage of infection with minimal transcript dilution. PPAs were identified by confocal microscopy in transformed roots of Medicago truncatula expressing GFP:HDEL, colonized by the AM fungus Gigaspora margarita. A PPA-targeted suppressive-subtractive cDNA library was built, the cDNAs were cloned and sequenced, and led to the identification of 107 putative interaction-specific genes. The expression of a subset of 15 genes, selected by reverse Northern dot blot screening, and five additional genes, potentially involved in PPA formation, was analyzed by real-time RT PCR and compared with an infection stage, 48 hours after the onset of the PPA. Comparison of the expression profile of G. margarita-inoculated wild-type (WT) and the mycorrhiza-defective dmi3-1 mutant of M. truncatula revealed that an expansin-like gene, expressed in WT epidermis during PPA development, can be regarded as an early host marker for successful mycorrhization. A putative Avr9/Cf9 rapidly elicited gene, found to be up-regulated in the mutant, suggests novel regulatory roles for the DMI3 protein in the early mycorrhization process.




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