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Published on September 28, 2007; 10.1104/pp.107.104422


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Received June 21, 2007
Accepted September 14, 2007

Global Expression Profiling Applied to the Analysis of Arabidopsis Stamen Development

Marcio Alves-Ferreira , Frank Wellmer , Aline Banhara , Vijaya Kumar , Jose Luis Riechmann , and Elliot M. Meyerowitz *

California Institute of Technology, Division of Biology, Pasadena, CA 91125, USA; Department of Genetics, Federal University of Rio de Janeiro, Av. Prof. Rodolpho Paulo Rocco, CCS, 21949900 Rio de Janeiro, Brazil

* Corresponding author; email: meyerow{at}caltech.edu.

To obtain detailed information about gene expression during stamen development in Arabidopsis thaliana, we compared, by microarray analysis, the gene expression profile of wild-type inflorescences to those of the floral mutants apetala3, sporocyteless/nozzle, and male sterile 1, in which different aspects of stamen formation are disrupted. These experiments led to the identification of groups of genes with predicted expression at early, intermediate and late stages of stamen development. Validation experiments using in situ hybridization confirmed the predicted expression patterns.

Additional experiments aimed at characterizing gene expression specifically during microspore formation. To this end, we compared the gene expression profiles of wild-type flowers of distinct developmental stages to those of the male sterile 1 mutant. Computational analysis of the datasets derived from this experiment led to the identification of genes that are likely involved in the control of key developmental processes during microsporogenesis. We also identified a large number of genes whose expression is prolonged in ms1 mutant flowers compared to the wild type. This result suggests that MS1, which encodes a putative transcriptional regulator, is involved in the stage-specific repression of these genes.

Lastly, we applied reverse genetics to characterize several of the genes identified in the microarray experiments and uncovered novel regulators of microsporogenesis, including the transcription factor MYB99 and a putative phosphatidylinositol 4-kinase.




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