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Plant Physiology Preview Published on March 11, 2009; 10.1104/pp.108.134882
OPEN ACCESS ARTICLE
Received December 30, 2008 System Analysis of An Arabidopsis Mutant Altered in de novo Fatty Acid Synthesis Reveals Diverse Changes in Seed Composition and Metabolism
Interdisciplinary Plant Group and Division of Biochemistry; Computer Science Department; DNA Core Microarray Facility; Charles Gehrke Proteomics Center 109 Christopher S. Bond Life Sciences Center, University of Missouri-Columbia, Columbia, Missouri 65211, USA * Corresponding author; email: thelenj{at}missouri.edu.
Embryo-specific overexpression of biotin carboxyl carrier protein 2 (BCCP2) inhibited plastid acetyl-CoA carboxylase (ACCase) resulting in altered oil, protein, and carbohydrate composition in mature Arabidopsis seed. To characterize gene and protein regulatory consequences of this mutation, global microarray, two-dimensional difference gel electrophoresis, iTRAQ, and quantitative immunoblotting were performed in parallel. These analyses revealed: 1) transgenic overexpression of BCCP2, did not affect expression of other ACCase subunits; 2) four subunits to plastid pyruvate dehydrogenase complex (PDC) were 25-70% down-regulated at protein but not transcript levels; 3) key glycolysis and de novo fatty acid/lipid synthesis enzymes were induced; 4) multiple storage proteins, but not cognate transcripts, were up-regulated; and 5) biotin synthesis pathway was up-regulated at both transcript and protein levels. Biotin production appears closely matched to endogenous BCCP levels, since overexpression of BCCP2 produced mostly apo-BCCP2 and the resulting ACCase-compromised, low-oil phenotype. Differential expression of glycolysis, plastid PDC, fatty acid, and lipid synthesis activities indicate multiple, complex regulatory responses including feedback as well as futile "feed-forward" elicitation in the case of fatty acid and lipid biosynthetic enzymes. Induction of storage proteins reveals oil and protein synthesis share carbon intermediate(s) and that reducing malonyl-CoA flow into fatty acids diverts carbon into amino acid and protein synthesis.
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