Enhanced Photosynthetic Performance and Growth as a Consequence of Decreasing Mitochondrial Malate Dehydrogenase Activity in Transgenic Tomato Plants

Cloning of a cDNA-Encoding mMDH from Tomato

Searching tomato expressed sequence tag collections (Van der Hoeven et al., 2003) facilitated the isolation of the full-length 1,041-bp mMDH clone cLEI112D19 (subsequently named SlmMDH; GenBank accesssion no. AY725474). Sequence analysis of the tomato MDH revealed an open reading frame of 346 amino acids. Comparison with functionally characterized MDHs revealed relatively high identity with the mitochondrial isoforms and a much lower homology with plastidial, cytosolic, and glycoxysomal isoforms (Fig. 1A ). SlmMDH bears characteristics of a mitochondrial transit peptide sequence, indicating a mitochondrial location for the protein encoded by the SlmMDH cDNA. These in silico predictions were further corroborated by promoter-green fluorescent protein fusion studies (C. Studart-Rodriguez, F. Carrari, and A.R. Fernie, unpublished data). Analysis of mRNA northern blots using the SlmMDH cDNA as a probe indicates constitutive expression of the gene, with the transcript present at approximately equivalent levels in young and mature leaves, stems, roots, and fruits. In addition, the transcript is ubiquitous during fruit development (data not shown).

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Figure 1.

Characterization and expression of tomato mMDH. A, Dendrogram of plant MDH sequences. MDH sequences were aligned using the ClustalW alignment program (Higgins and Sharp, 1988). Organellar targeting sequences were removed from the aligned sequences. The taxonomic names of the species and the accession numbers of the sequences used in the phylogenetic analysis are: Solanum (S. lycopersicum), mMDH, AY725474; Glycine (G. max), mMDH, AF068687; Chlamydomonas (C. reinhardtii), mMDH, AAA84971.1; Medicago (M. sativa), mMDH, AF020271; Brassica (B. napus), mMDH, X89451; Vitis (V. vinifera), mMDH, AF195869; Citrullus (C. lanatus), mMDH, P17783; Eucalyptus (E. gunnii), mMDH, X78800; Oryza (O. sativa) mMDH, AF444195; Solanum (S. lycopersicum), gMDH, AY725476; Brassica (B. napus), gMDH, 1050435; Medicago (M. sativa) gMDH, AF020270; Glycine (G. max), gMDH, P37228; Citrullus (C. lanatus), gMDH, P19446; Arabidopsis (Arabidopsis thaliana), chMDH-NAD dependent, Y13987; Solanum (S. lycopersicum), chMDH, AY725477; Zea (Z. mays), chMDH, X16084; Pisum (P. sativum), chMDH, X74507; Medicago (M. sativa), chMDH, AF020269; Sorghum (S. bicolor), chMDH, 100755; Spinacia (S. oleracea), chMDH, X84020; Solanum (S. lycopersicum), cMDH, AY725475; Medicago (M. sativa), cMDH, AF020272; Zea (Z. mays), cMDH, 2286153; Arabidopsis, cMDH, 2341034. B, Construction of a chimeric gene for the expression of tomato mMDH antisense RNA (subsection i) or RNA interference (RNAi; subsection ii) consisting of a 514-bp fragment encoding the CaMV 35S promoter and a 961-bp (antisense) or two 961-bp tandem fragments separated by a stem loop (RNAi; ocs terminator). C, Western-blot analysis of leaves of transgenic plants with altered expression of mMDH as compared to wild type (WT). D, Total MDH activity determined in 6-week-old leaves taken from fully expanded source leaves of transgenic plants with altered expression of mMDH as compared to wild type.

Transgenic Plants Show an Elevated Growth Rate But Not an Accelerated Developmental Phenotype

A 996-bp fragment of the cDNA-encoding mMDH was cloned either in the antisense orientation into the transformation vector pBINAR between the cauliflower mosaic virus (CaMV) promoter and the ocs terminator (Fig. 1B, subsection i) or using the RNAi design (Fig. 1B, subsection ii). We then transferred 60 transgenic tomato plants obtained by Agrobacterium tumefaciens-mediated transformation to the greenhouse.

Screening of the lines for a reduction of total cellular MDH activity yielded eight lines that exhibited a significant reduction in activity as determined by activity gel assays (data not shown). To demonstrate that this reduction was a consequence of a specific reduction in the mitochondrial isoform we carried out northern (data not shown) and western (Fig. 1C) analyses in addition to direct assay of total MDH activity (Fig. 1D). These preliminary studies suggested that the antisense, but not the RNAi, transformants were suitable for further study since in these lines the reduction in MDH expression was confined to the mitochondrial isoform. Subcellular fractionation studies on samples from a second harvest (Table I), provided further evidence, in addition to that provided by zymogram and northern analysis, that the reduction in activity was confined to the mitochondria. It should be noted that, although the absolute values for total MDH activity are variable between the harvests, the relative degree of inhibition in the antisense lines is conserved between the harvests.

Analysis of the maximal catalytic activities of other important enzymes of photosynthetic carbohydrate metabolism revealed no changes in important enzymes of photosynthesis (Rubisco and Calvin cycle enzymes) but a mild increase in the glycolytic enzyme phosphofructokinase (PFK). In addition, no significant differences were observed in the maximal catalytic activity of l-galactono-lactone dehydrogenase (GLDH), the terminal step of ascorbic acid biosynthesis in plants (Wheeler et al., 1998); however, this activity was highly variable both across and within genotypes.

When we grew the transgenic plants in the greenhouse side by side with wild-type controls, a clear increase in the growth of the aerial parts of the transformants was observed (Fig. 2A ). Close examination of the transgenic plants revealed that they were significantly taller and appeared to have marginally bigger fruit; however, there were no difference in leaf formation or onset of senescence. These visual observations were supported by experimental measurements (Fig. 2B). Furthermore, there was a tendency of earlier flowering in the transformants (significant in the cases of lines AL7 and AL8). While the total leaf mass did not vary across the genotypes, analysis of root biomass revealed that this was somewhat restricted in the transformants (Fig. 2B). When taken together these findings imply an improved harvest index. Assessment of pigment content of leaves revealed that the photosynthetic pigment content was largely unaltered with the exception of small decreases in violaxanthin and significant increases in the level of antheraxanthin (data not shown).

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Figure 2.

Growth phenotype of antisense mMDH tomato plants. Transgenic plants showed an enhanced aerial biomass with respect to the wild type. A, Photograph showing representative plants after 7 weeks growth. B, Biomass (in grams dry weight) of various plant organs on plant maturity. Wild type, black bar; AL7, very dark gray bar; AL8, dark gray bar; AL9, light gray bar; and AL21, very light gray bar.

Reduction in mMDH Activity Results in an Increased Chloroplastic-Electron Transport Rate and Enhanced Photosynthesis

Given the increase in aerial yield in the transformants, we next analyzed whether they exhibited altered photosynthetic rates. Firstly, we studied the metabolism of ¹⁴CO₂ by leaf discs excised from the wild-type and transformant plants. Notably the assimilation rate was markedly increased in plants exhibiting inhibition of MDH (Fig. 3A ). Furthermore, this increased carbon fixation was coupled with an increase in the accumulation of [¹⁴C]Suc, [¹⁴C]-starch, and [¹⁴C]-organic acids. When these data are expressed as a percentage of ¹⁴CO₂ metabolised, decreased mMDH activity led to a decreased partitioning into organic and amino acids, implying a reduced respiration rate in these plants.

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Figure 3.

Effect of decreased mMDH activity on photosynthesis. A, Photosynthetic assimilation and carbon partitioning at the onset of illumination. Leaf discs were cut from six separate untransformed potato plants and four independent transgenic lines at the end of the night and illuminated at 250 μmol photosynthetically active radiation m⁻² s⁻¹ in an oxygen electrode chamber containing air saturated with ¹⁴CO₂. After 30 min the leaf discs were extracted and fractionated. B, In vivo fluorescence emission was measured as an indicator of the ETR by use of a PAM fluorometer at PFDs of 250 (black bars) and 700 μmol m⁻² s⁻¹ (white bars). C, Assimilation rate. D, Transpiration rate. E, Stomatal conductance. The lines used were: wild type, black circles; AL21, white circles; and AL7, black triangles. Values are presented as mean ± se of determinations on six individual plants per line; an asterisk indicates values that were determined by the t test to be significantly different (P < 0.05) from the wild type.

As a second experiment, fluorescence emission was measured in vivo using a pulse amplitude modulation (PAM) fluorimeter in order to calculate relative electron transport rates (ETRs). When exposed to higher irradiance (photon flux density [PFD] of 700 μmol m⁻² s⁻¹) the mMDH plants exhibited elevated ETRs (significantly so in the case of line AL7; Fig. 3B). Finally, gas exchange was measured directly in a subset of the transformants under PFDs that ranged from 100 to 1,000 μmol m⁻² s⁻¹ (Fig. 3, C–E). The transformants exhibited assimilation rates that were higher than the wild type under all conditions except the lowest irradiance (significantly so in the case of AL21; Fig. 3C). Similar results were obtained from a second harvest. Interestingly, when data from both harvests are plotted together a clear negative correlation becomes apparent between the activity of MDH and the rate of photosynthesis (data not shown). Analysis of other parameters of gas exchange revealed that the transformants also exhibited minor changes in transpiration rate at all PFD (Fig. 3D) and that the stomatal conductance is noticeably (yet not significantly) lower in the transgenics. The lower stomatal conductance, paradoxically, suggests increased resistance to carbon dioxide uptake (Fig. 3E) and, in keeping with this, the internal carbon dioxide concentration inside the stomatal cavity was estimated to be lower (data not shown).

Photosynthetic Carbon Metabolism in the mMDH Transformants

Analysis of the carbohydrate content of leaves from 6-week-old plants during a diurnal cycle revealed that the transformants were characterized by small, but nonsignificant, increases in Suc and starch contents (Fig. 4 ) and significant increases in Glc and Fru (data not shown). In all cases metabolite contents were in a similar range to those reported previously for tomato (e.g., Galtier et al., 1993). We next decided to extend this study to major primary pathways of plant photosynthetic metabolism by utilizing an established gas chromatography-mass spectrometry (GC-MS) protocol for metabolic profiling (Fernie et al., 2004a). These studies revealed a decrease in levels of Asn and Gln (despite no consistent change in the levels of Asp or Glu) alongside a decrease in Met content in the transgenic lines (Fig. 5 ). In addition, trends of increased Gly and succinate content were observable in the transformants; however, the levels of the other TCA cycle intermediates were largely unaffected. When other organic acids were analyzed, the cell wall constituents galacturonic and GlcUA showed no consistent pattern of change, but ascorbate and dehydroascorbate increased by up to 5.7-fold in the transgenic lines (significantly in the case of dehydroascorbate but notably not in line AL9).

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Figure 4.

Diurnal changes in Suc (A) and starch (B) content in leaves of 7-week-old transgenic and wild-type tomato plants. At each time point, samples were taken from mature source leaves, and the data presented are mean ± se of determinations on six individual plants per line. The lines used were: wild type, black circles; AL7, white circles; AL8, black triangles; and AL21, white triangles. Black bars indicate the dark period; white bars indicate the light period.

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Figure 5.

Relative metabolite content of fully expanded leaves from 8-week-old plants of the antisense mMDH lines. Metabolites were determined as described in “Materials and Methods.” The full data set from these metabolic profiling studies can be accessed at our Web site: www.mpimp-golm.mpg.de/fernie. Data are normalized with respect to the mean response calculated for the wild type (to allow statistical assessment, individual samples from this set of plants were normalized in the same way). Values are presented as mean ± se of determinations on six individual plants per line; asterisk indicates values that were determined by the t test to be significantly different (P < 0.05) from the wild type. Wild type, black bar; AL7, very dark gray bar; AL8, dark gray bar; AL9, light gray bar; and AL21, very light gray bar.

Since this method does not readily allow the determination of phosphorylated intermediates, which are important diagnostic markers for alterations in photosynthesis (Stitt, 1997) we assayed these by means of cycling assays, regular linear spectrophotometric assays, and HPLC methods (Table II). There were no significant differences in either the individual pools or the total phosphoester levels in the transformants, and furthermore, little change in the levels of nucleotides. The one exception to this statement is the fact that line AL9 displayed a decreased level of UTP and consequently a decreased level of total uridinylates. Interestingly, there was, however, a tendential decrease in the level of inorganic phosphate in the transgenics (significant in lines AL8 and AL9) and a consequent increase in the deduced phosphoester to inorganic phosphate ratio.

Inhibition in mMDH Activity Results in Reduced Rates of Respiration

While some of the results presented above suggest a decreased rate of respiration, they do not provide direct evidence in support of this. We therefore next directly evaluated the rate of respiration in the transformants. For this purpose we adopted two strategies. First, we recorded the evolution of ¹⁴CO₂ following incubation of leaf discs in positionally labeled ¹⁴C-Glc molecules, and second, we used a combination of conventional respiratory and NMR studies of isolated mitochondria to assess flux through the TCA cycle. In the first experiment, we incubated leaf discs taken from plants in the light and supplied these with [1-¹⁴C], [2-¹⁴C], [3:4-¹⁴C], or [6-¹⁴C]Glc over a period of 6 h. During this time, we collected the ¹⁴CO₂ evolved at hourly intervals. Carbon dioxide can be released from the C1 position by the action of enzymes that are not associated with mitochondrial respiration, but carbon dioxide evolution from the C3:4 positions of Glc cannot (ap Rees and Beevers, 1960). Thus, the ratio of carbon dioxide evolution from C1 to C3:4 positions of Glc provides an indication of the relative rate of the TCA cycle with respect to other processes of carbohydrate oxidation. When the relative ¹⁴CO₂ release of the transgenic and wild-type lines is compared for the various fed substrates, an interesting pattern emerges (Fig. 6A ). The rate of ¹⁴CO₂ evolution is always highest in leaves incubated in [1-¹⁴C]Glc; however, the absolute rate of carbon dioxide evolution from the C1 position of the transgenic lines is far in excess of that observed in the wild type. In contrast, the release from the C3:4 positions is much lower in the transgenic lines (both in relative and absolute terms) than in the wild type. Thus, these data reveal that a lower proportion of carbohydrate oxidation is carried out by the TCA cycle in the transgenic lines.

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Figure 6.

Respiratory parameters in leaves and isolated fruit mitochondria of the antisense mMDH lines. A, ¹⁴CO₂ evolution from isolated leaf discs in the light. Leaf discs were taken from 10-week-old-plants and were incubated in 10 mm MES-KOH, pH 6.5, supplemented with [1-¹⁴C]-, [2-¹⁴C]-, [3:4-¹⁴C]-, or [6-¹⁴C]Glc (at an activity concentration of 2.32 KBq mL⁻¹ and specific activity of 58, 55, 54, and 56 mC_i mmol⁻¹, respectively). The ¹⁴CO₂ liberated was captured (in hourly intervals) in a KOH trap and the amount of radiolabel released was subsequently quantified by liquid scintillation counting. Values are presented as mean ± se of determinations on six individual plants per line. Note the scale on the y axis is different in the plots of the transgenic and wild-type data. B, Proton-decoupled ¹³C NMR spectra of tomato mitochondria isolated from (subsection i) wild type and (subsection ii) line 8 MDH antisense breaker fruits. The spectra were recorded over a 4-h incubation period under state III respiration in the presence of 10 mm [3- ¹³C]pyruvate, 2.1 mm citrate, 0.02 mm isocitrate, 1.3 mm succinate, 0.02 mm fumarate, and 0.6 mm malate. a, Citrate; b, DMSO; c, succinate. C, Average amount of [4-¹³C]citrate and [2-¹³C]succinate production in the first hour by wild type (black bar), line 7 MDH antisense (light gray bar), and line 8 MDH antisense (dark gray bar) mitochondria as measured by ¹³C NMR (n = 4 except line 8 where n = 2 for citrate measurements and n = 1 for the succinate measurement). D, The rate of oxygen consumption of isolated tomato mitochondria in the presence of 10 mm pyruvate, 10 mm malate, 0.1 mm TPP, and 1 mm ADP (black bar); 1 mm NADH (light gray bar); or 1 mm NADH and 2 mm l-galactono-lactone (dark gray bar). Values are presented as mean ± se of determinations on four individual plants per line; an asterisk indicates values that were determined by the t test to be significantly different (P < 0.05) from NADH alone.

Carbon dioxide evolution from the C2 and C6 positions was relatively similar across the genotypes with the exception that evolution from the C6 position was somewhat higher, in both lines tested, and that from the C2 position was lower, in line AL21, than that observed in wild type.

Isolation of suitable quantities of leaf mitochondria for respiratory measurements was not feasible, so for the second experiment we isolated mitochondria from breaker fruits obtained from the wild type and two transgenic lines (AL7 and AL8). The mitochondria were incubated with [3-¹³C]pyruvate under simulated cytosolic conditions (described in detail in Smith et al., 2004), and representative ¹³C NMR spectra from line AL8 and the wild type can be seen in Figure 6B. The citrate and succinate signal intensities are lower in the spectra from the transgenic line, and a quantitative analysis confirms that there was a significant decrease in the [4-¹³C]citrate signal in line 8 (Fig. 6C). Surprisingly, the rate of oxygen consumption in the presence of malate and pyruvate showed no difference between the wild type and transgenic lines (Fig. 6D). However, the rate of oxygen consumption in the presence of l-galactono-lactone and NADH was significantly increased in line AL8 (Fig. 4D). The lack of change in oxygen consumption could, however, potentially be explained by the fact that the inhibition of mitochondrial activity was not as dramatic as that observed in the leaf (data not shown).

The Assimilation Rate Is Elevated following the Incubation of Wild-Type Leaf Discs on High Concentrations of Ascorbate

To summarize, the transgenic lines are characterized by a decreased rate of flux through the TCA cycle, a decreased rate of respiration, an increase in the cellular level of ascorbate, and an enhanced photosynthetic rate. To ascertain if the level of ascorbate has any functional significance with respect to the rate of respiration, we next incubated leaf discs isolated from wild-type plants in 50 mm ascorbate in the dark for a period of 2 h before illuminating them and measuring the assimilation of ¹⁴CO₂ (Fig. 7 ). We chose this concentration of ascorbate since it is similar to that estimated to be present in the chloroplast (Smirnoff, 2000). Intriguingly, ascorbate feeding led to an increase in assimilation of approximately 34% (when this experiment was repeated with a range of concentrations, a similar result was observed; however, there was no enhanced assimilation rate at concentrations lower than 50 mm). This elevated assimilation rate was coupled to increased incorporation into starch, organic acids, and amino acids with the increase most prominent in the case of organic acids.

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Figure 7.

Effect of ascorbate loading on photosynthesis. Photosynthetic assimilation and carbon partitioning at the onset of illumination. Leaf discs were cut from six separate untransformed tomato plants at the end of the night and incubated in the dark for 2 h in incubation medium (10 mm MOPS buffer, pH 6.0) prior to illumination at 250 μmol photosynthetically active radiation m⁻² s⁻¹ in an oxygen electrode chamber containing air saturated with ¹⁴CO₂. After 30 min, the leaf discs were extracted and fractionated. Gray bars indicate leaf discs incubated in the absence and black bars in the presence of 50 mm ascorbate; an asterisk indicates values that were determined by the t test to be significantly different (P < 0.05) between experimental conditions.

Materials

Tomato (Solanum lycopersicum) L. cv Moneymaker was obtained from Meyer Beck (Berlin). Plants were handled as described in the literature (Carrari et al., 2003). All chemicals and enzymes used in this study were obtained from Roche Diagnostics (Mannheim, Germany), with the exception of radiolabeled sodium bicarbonate and d-[1-¹⁴C]-, d-[3:4-¹⁴C]-, and d-[6-¹⁴C]Glc, which were from Amersham International (Braunschweig, Germany); d-[2-¹⁴C]Glc was from American Radiolabeled Chemicals (St. Louis); and the [3-¹³C]pyruvate was from Aldrich Chemical (Milwaukee, WI).

cDNA Cloning and Expression

The 996-bp fragment of the mitochondrial SlMDH was cloned in antisense orientation or using an RNAi approach into the vector pBINAR (Liu et al., 1999) between the CaMV 35S promoter and the ocs terminator. This construct was introduced into plants by an Agrobacterium-mediated transformation protocol, and plants were selected and maintained as described in the literature (Tauberger et al., 2000). Initial screening of 58 lines (26 antisense and 32 RNAi) was carried out using a combination of total enzyme activity determinations and activity gels. These screens allowed the selection of eight lines, which were taken to the next generation. Total MDH activity, MDH protein content, and expression of the various isoforms of MDH were confirmed in the second harvest of these lines after which four lines were chosen for detailed physiological and biochemical analyses.

Northern-Blot Analysis

Total RNA was isolated using the commercially available Trizol kit (Gibco BRL, Karlsruhe, Germany) according to the manufacturer's suggestions for the extraction from plant material. Hybridization using standard conditions was carried out using the expressed sequence tags for the various isoforms of MDH obtained from Clemson University (Clemson, SC) collection.

Immunodetection of MDH Protein and Gel Stains of MDH Activities

Western analysis of MDH protein was carried out on either crude protein extract or mitochondrial protein extract, exactly as previously described (Gietl et al., 1996) using antibodies kindly provided by the authors. Activity gels were performed on 20 and 40 μg of crude protein extract from 2 different plants, using the protocol described by Shaw and Prasad (1970).

Analysis of Enzyme Activities

Enzyme extracts were prepared as described previously (Tauberger et al., 2000). All activities were determined as described by Carrari et al. (2003) with the exception of PFK and phosphoglucomutase activities, which were determined as defined in Fernie et al. (2001a), and MDH, which were determined as defined in Jenner et al. (2001). GLDH activity was determined as described by Bartoli et al. (2000). The mitochondrial activity of MDH was determined by applying the same method to mitochondrial fractions following the protocol for isolation described in Sweetlove et al. (2002), while those for the plastid, peroxisome, and cytosol were estimated in comparison to marker enzymes for these compartments. The purity of the mitochondrial preparations was confirmed by measurement of the cytochrome c oxidase (Neuberger, 1985) and pyrophosphate-dependent phosphofructokinase (Fernie et al., 2001b), which serve as markers for the mitochondria and cytosol, respectively. Modifications in the activities of peroxisomal and plastidial isoforms of MDH were assessed by comparison to the levels of catalase (Aebi, 1984) and alkaline pyrophosphatase (Farre et al., 2001a), respectively.

Determination of Metabolite Levels

Leaf samples were taken at the time point indicated, immediately frozen in liquid nitrogen, and stored at −80°C until further analysis. Extraction was performed by rapid grinding of tissue in liquid nitrogen and immediate addition of the appropriate extraction buffer. The levels of starch, Suc, Fru, and Glc in the leaf tissue were determined exactly as described previously (Fernie et al., 2001a). Levels of glycolytic intermediates, nucleotides, and nucleosides were measured as described in Gibon et al. (2002), while phosphate was determined using the protocol described by Sharkey and Vanderveer (1989). The levels of all other metabolites was quantified by GC-MS exactly following the protocol described by Roessner et al. (2001) with the exception that the peak identification was optimized to tomato tissues (Roessner-Tunali et al., 2003).

Photosynthetic Pigment Determination

The determination of the levels of chlorophylls a and b, β-carotene, lutein, neoxanthin, violaxanthin, antheraxanthin, and zeaxanthin were performed in acetone extracts (Thayer and Björkmann, 1990).

Measurements of Photosynthetic Parameters

The ¹⁴C-labeling pattern of Suc, starch, and other cellular constituents was performed by illuminating leaf discs (10-mm diameter) in a leaf-disc oxygen electrode (Hansatech, Kings Lynn, Norfolk, UK) in saturating ¹⁴CO₂ at a PFD of 250 μmol m⁻² s⁻¹ of photosynthetically active radiation at 20°C for 30 min, and subsequent fractionation was performed exactly as detailed by Lytovchenko et al. (2002). Fluorescence emission was measured in vivo using a PAM fluorometer (Walz, Effeltrich, Germany) on 9-week-old plants maintained at fixed irradiance (250 and 700 μmol photons m⁻² s⁻¹) for 30 min prior to measurement of chlorophyll fluorescence yield and relative ETR calculated using the WinControl software package (Walz). Gas-exchange measurements were performed in a special custom-designed open system (Lytovchenko et al., 2002).

Measurement of Respiratory Parameters

Dark respiration was measured using the same gas exchange system as defined above. Estimations of the TCA cycle flux on the basis of ¹⁴CO₂ evolution were carried out following incubation of isolated leaf discs in 10 mm MES-KOH, pH 6.5, containing 2.32 KBq mL⁻¹ of [1-¹⁴C]-, [2-¹⁴C]-, [3:4-¹⁴C]-, or [6-¹⁴C]Glc. ¹⁴CO₂ evolved was trapped in KOH and quantified by liquid scintillation counting. The results were interpreted following ap Rees and Beevers (1960). Estimations of the TCA cycle flux were also performed in isolated mitochondria. For this purpose, mitochondria were isolated from fruit following the method of Holtzapffel et al. (2002) and rapidly frozen and stored at −80°C prior to NMR analysis described below.

¹³C NMR Spectroscopy

Proton-decoupled ¹³C NMR spectra of low-density mitochondrial suspensions were recorded at 150.9 MHz on a Varian Unity Inova 600 spectrometer (Palo Alto, CA) using a 10-mm diameter broadband probehead. The suspension was oxygenated with an air-lift (Fox et al., 1989), and NMR spectra were recorded in 15-min blocks over a period of 4 h using acquisition conditions similar to those described previously (Aubert et al., 2001). Mitochondria were suspended at a density of 200 μg mitochondrial protein/milliliter in a buffer containing 0.2 m mannitol, 0.1 m MOPS, 5 mm MgCl₂, 0.1% w/v bovine serum albumin, and 20 mm KH₂PO₄ in 10% D₂0, corrected to pH 7.2 with KOH. The metabolism of 10 mm [3-¹³C]pyruvate was observed in the presence of 20 mm Glc, 2.1 mm citrate, 1.3 mm succinate, 0.6 mm malate, 0.3 mm NAD⁺, 0.2 mm ADP, 0.1 mm thiamine pyrophosphate, 0.02 mm fumarate, 0.02 mm isocitrate, and 0.1 unit hexokinase. Glc and hexokinase were included to regenerate ADP (Aubert et al., 2001) and the TCA cycle acids to mimic the likely cytosolic composition (Farre et al., 2001b).

Statistical Analysis

The t tests were performed using the algorithm embedded into Microsoft Excel (Microsoft, Seattle). The term significant is used in the text only when the change in question has been confirmed to be significant (P < 0.05) with the t test.

Sequence data from this article have been deposited with the EMBL/GenBank data libraries under accession numbers AY725474 (mMDH), AY725475 (cMDH), AY725476 (gMDH), and AY725477 (chMDH).