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Table of Contents

Plant Physiology: 142 (2)
Oct 2006

ON THE INSIDE

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    On the Inside
    Peter V. Minorsky
    Plant Physiol. Oct 2006, 142 (2) 377-378; DOI: https://doi.org/10.1104/pp.104.900206

EDITORIALS

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    Announcing Focus Collections in Plant Physiology
    Donald R. Ort
    Plant Physiol. Oct 2006, 142 (2) 379; DOI: https://doi.org/10.1104/pp.104.900205

BREAKTHROUGH TECHNOLOGIES

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    Clarification of Pathway-Specific Inhibition by Fourier Transform Ion Cyclotron Resonance/Mass Spectrometry-Based Metabolic Phenotyping Studies
    Akira Oikawa, Yukiko Nakamura, Tomonori Ogura, Atsuko Kimura, Hideyuki Suzuki, Nozomu Sakurai, Yoko Shinbo, Daisuke Shibata, Shigehiko Kanaya, Daisaku Ohta
    Plant Physiol. Oct 2006, 142 (2) 398-413; DOI: https://doi.org/10.1104/pp.106.080317

BIOINFORMATICS

  • Open Access
    Whole-Plant Growth Stage Ontology for Angiosperms and Its Application in Plant Biology
    Anuradha Pujar, Pankaj Jaiswal, Elizabeth A. Kellogg, Katica Ilic, Leszek Vincent, Shulamit Avraham, Peter Stevens, Felipe Zapata, Leonore Reiser, Seung Y. Rhee, Martin M. Sachs, Mary Schaeffer, Lincoln Stein, Doreen Ware, Susan McCouch
    Plant Physiol. Oct 2006, 142 (2) 414-428; DOI: https://doi.org/10.1104/pp.106.085720
  • Open Access
    Computational Estimation and Experimental Verification of Off-Target Silencing during Posttranscriptional Gene Silencing in Plants
    Ping Xu, Yuanji Zhang, Li Kang, Marilyn J. Roossinck, Kirankumar S. Mysore
    Plant Physiol. Oct 2006, 142 (2) 429-440; DOI: https://doi.org/10.1104/pp.106.083295

GENOME ANALYSIS

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    Whole-Genome Analysis of Oryza sativa Reveals Similar Architecture of Two-Component Signaling Machinery with Arabidopsis
    Ashwani Pareek, Anupama Singh, Manoj Kumar, Hemant R. Kushwaha, Andrew M. Lynn, Sneh L. Singla-Pareek
    Plant Physiol. Oct 2006, 142 (2) 380-397; DOI: https://doi.org/10.1104/pp.106.086371

BIOCHEMICAL PROCESSES AND MACROMOLECULAR STRUCTURES

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    A Cytosolic Arabidopsis d-Xylulose Kinase Catalyzes the Phosphorylation of 1-Deoxy-d-Xylulose into a Precursor of the Plastidial Isoprenoid Pathway
    Andréa Hemmerlin, Denis Tritsch, Michael Hartmann, Karine Pacaud, Jean-François Hoeffler, Alain van Dorsselaer, Michel Rohmer, Thomas J. Bach
    Plant Physiol. Oct 2006, 142 (2) 441-457; DOI: https://doi.org/10.1104/pp.106.086652
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    Characterization of Synthetic Hydroxyproline-Rich Proteoglycans with Arabinogalactan Protein and Extensin Motifs in Arabidopsis
    José M. Estévez, Marcia J. Kieliszewski, Natalie Khitrov, Chris Somerville
    Plant Physiol. Oct 2006, 142 (2) 458-470; DOI: https://doi.org/10.1104/pp.106.084244

BIOENERGETICS AND PHOTOSYNTHESIS

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    A Transgenic Approach to Understanding the Influence of Carbonic Anhydrase on C18OO Discrimination during C4 Photosynthesis
    Asaph B. Cousins, Murray R. Badger, Susanne von Caemmerer
    Plant Physiol. Oct 2006, 142 (2) 662-672; DOI: https://doi.org/10.1104/pp.106.085167
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    Species Having C4 Single-Cell-Type Photosynthesis in the Chenopodiaceae Family Evolved a Photosynthetic Phosphoenolpyruvate Carboxylase Like That of Kranz-Type C4 Species
    María Valeria Lara, Simon D.X. Chuong, Hossein Akhani, Carlos Santiago Andreo, Gerald E. Edwards
    Plant Physiol. Oct 2006, 142 (2) 673-684; DOI: https://doi.org/10.1104/pp.106.085829

CELL BIOLOGY AND SIGNAL TRANSDUCTION

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    Quantification of Plasmodesmatal Endoplasmic Reticulum Coupling between Sieve Elements and Companion Cells Using Fluorescence Redistribution after Photobleaching
    Helle J. Martens, Alison G. Roberts, Karl J. Oparka, Alexander Schulz
    Plant Physiol. Oct 2006, 142 (2) 471-480; DOI: https://doi.org/10.1104/pp.106.085803
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    Species Preferentiality of the Pollen Tube Attractant Derived from the Synergid Cell of Torenia fournieri
    Tetsuya Higashiyama, Rie Inatsugi, Sachio Sakamoto, Narie Sasaki, Toshiyuki Mori, Haruko Kuroiwa, Takashi Nakada, Hisayoshi Nozaki, Tsuneyoshi Kuroiwa, Akihiko Nakano
    Plant Physiol. Oct 2006, 142 (2) 481-491; DOI: https://doi.org/10.1104/pp.106.083832
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    Chimeric Proteins Suggest That the Catalytic and/or C-Terminal Domains Give CesA1 and CesA3 Access to Their Specific Sites in the Cellulose Synthase of Primary Walls
    Jian Wang, Paul A. Howles, Ann H. Cork, Rosemary J. Birch, Richard E. Williamson
    Plant Physiol. Oct 2006, 142 (2) 685-695; DOI: https://doi.org/10.1104/pp.106.084004

DEVELOPMENT AND HORMONE ACTION

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    Receptor Signal Output Mediated by the ETR1 N Terminus Is Primarily Subfamily I Receptor Dependent
    Fang Xie, Qian Liu, Chi-Kuang Wen
    Plant Physiol. Oct 2006, 142 (2) 492-508; DOI: https://doi.org/10.1104/pp.106.082628
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    Gibberellin Mobilizes Distinct DELLA-Dependent Transcriptomes to Regulate Seed Germination and Floral Development in Arabidopsis
    Dongni Cao, Hui Cheng, Wei Wu, Hui Meng Soo, Jinrong Peng
    Plant Physiol. Oct 2006, 142 (2) 509-525; DOI: https://doi.org/10.1104/pp.106.082289
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    The turnip Mutant of Arabidopsis Reveals That LEAFY COTYLEDON1 Expression Mediates the Effects of Auxin and Sugars to Promote Embryonic Cell Identity
    Stuart A. Casson, Keith Lindsey
    Plant Physiol. Oct 2006, 142 (2) 526-541; DOI: https://doi.org/10.1104/pp.106.080895
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    Mutations in an Auxin Receptor Homolog AFB5 and in SGT1b Confer Resistance to Synthetic Picolinate Auxins and Not to 2,4-Dichlorophenoxyacetic Acid or Indole-3-Acetic Acid in Arabidopsis
    Terence A. Walsh, Roben Neal, Ann Owens Merlo, Mary Honma, Glenn R. Hicks, Karen Wolff, Wendy Matsumura, John P. Davies
    Plant Physiol. Oct 2006, 142 (2) 542-552; DOI: https://doi.org/10.1104/pp.106.085969
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    Transcriptional Regulation of Gibberellin Metabolism Genes by Auxin Signaling in Arabidopsis
    Martín Frigerio, David Alabadí, José Pérez-Gómez, Laura García-Cárcel, Andrew L. Phillips, Peter Hedden, Miguel A. Blázquez
    Plant Physiol. Oct 2006, 142 (2) 553-563; DOI: https://doi.org/10.1104/pp.106.084871
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    Galactoglucomannans Increase Cell Population Density and Alter the Protoxylem/Metaxylem Tracheary Element Ratio in Xylogenic Cultures of Zinnia
    Anna Beňová-Kákošová, Catherine Digonnet, Florence Goubet, Philippe Ranocha, Alain Jauneau, Edouard Pesquet, Odile Barbier, Zhinong Zhang, Peter Capek, Paul Dupree, Desana Lišková, Deborah Goffner
    Plant Physiol. Oct 2006, 142 (2) 696-709; DOI: https://doi.org/10.1104/pp.106.085712
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    Suppression of LX Ribonuclease in Tomato Results in a Delay of Leaf Senescence and Abscission
    Amnon Lers, Lilian Sonego, Pamela J. Green, Shaul Burd
    Plant Physiol. Oct 2006, 142 (2) 710-721; DOI: https://doi.org/10.1104/pp.106.080135

ENVIRONMENTAL STRESS AND ADAPTATION TO STRESS

  • Open Access
    Adenosine Kinase Modulates Root Gravitropism and Cap Morphogenesis in Arabidopsis
    Li-Sen Young, Benjamin R. Harrison, Narayana Murthy U.M., Barbara A. Moffatt, Simon Gilroy, Patrick H. Masson
    Plant Physiol. Oct 2006, 142 (2) 564-573; DOI: https://doi.org/10.1104/pp.106.084798
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    IMMUTANS Does Not Act as a Stress-Induced Safety Valve in the Protection of the Photosynthetic Apparatus of Arabidopsis during Steady-State Photosynthesis
    Dominic Rosso, Alexander G. Ivanov, Aigen Fu, Jane Geisler-Lee, Luke Hendrickson, Matt Geisler, Gregory Stewart, Marianna Krol, Vaughan Hurry, Steven R. Rodermel, Denis P. Maxwell, Norman P.A. Hüner
    Plant Physiol. Oct 2006, 142 (2) 574-585; DOI: https://doi.org/10.1104/pp.106.085886
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    Arabidopsis Carboxyl-Terminal Domain Phosphatase-Like Isoforms Share Common Catalytic and Interaction Domains But Have Distinct in Planta Functions
    Wooyoung Bang, Sewon Kim, Akihiro Ueda, Meenu Vikram, Daejin Yun, Ray A. Bressan, Paul M. Hasegawa, Jeongdong Bahk, Hisashi Koiwa
    Plant Physiol. Oct 2006, 142 (2) 586-594; DOI: https://doi.org/10.1104/pp.106.084939
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    Interaction between Nitric Oxide and Ethylene in the Induction of Alternative Oxidase in Ozone-Treated Tobacco Plants
    Luisa Ederli, Roberta Morettini, Andrea Borgogni, Claus Wasternack, Otto Miersch, Lara Reale, Francesco Ferranti, Nicola Tosti, Stefania Pasqualini
    Plant Physiol. Oct 2006, 142 (2) 595-608; DOI: https://doi.org/10.1104/pp.106.085472
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    Hormonal and Stress Induction of the Gene Encoding Common Bean Acetyl-Coenzyme A Carboxylase
    Rosa Elia Figueroa-Balderas, Berenice García-Ponce, Mario Rocha-Sosa
    Plant Physiol. Oct 2006, 142 (2) 609-619; DOI: https://doi.org/10.1104/pp.106.085597
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    The Key Role of Chlorocatechol 1,2-Dioxygenase in Phytoremoval and Degradation of Catechol by Transgenic Arabidopsis
    Yang Liao, Xiao Zhou, Jin Yu, Yajun Cao, Xian Li, Benke Kuai
    Plant Physiol. Oct 2006, 142 (2) 620-628; DOI: https://doi.org/10.1104/pp.106.085936
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    Transgenic Tobacco Plants Overexpressing Chitinases of Fungal Origin Show Enhanced Resistance to Biotic and Abiotic Stress Agents
    María de las Mercedes Dana, José A. Pintor-Toro, Beatriz Cubero
    Plant Physiol. Oct 2006, 142 (2) 722-730; DOI: https://doi.org/10.1104/pp.106.086140
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    Effects of Zinc Deficiency on Rice Growth and Genetic Factors Contributing to Tolerance
    Matthias Wissuwa, Abdelbagi M. Ismail, Seiji Yanagihara
    Plant Physiol. Oct 2006, 142 (2) 731-741; DOI: https://doi.org/10.1104/pp.106.085225
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    Detection and Quantification of Unbound Phytochelatin 2 in Plant Extracts of Brassica napus Grown with Different Levels of Mercury
    Santiago Iglesia-Turiño, Anna Febrero, Olga Jauregui, Cristina Caldelas, Jose Luis Araus, Jordi Bort
    Plant Physiol. Oct 2006, 142 (2) 742-749; DOI: https://doi.org/10.1104/pp.106.085068
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    Quantitative Profiling of Arabidopsis Polar Glycerolipids in Response to Phosphorus Starvation. Roles of Phospholipases Dζ1 and Dζ2 in Phosphatidylcholine Hydrolysis and Digalactosyldiacylglycerol Accumulation in Phosphorus-Starved Plants
    Maoyin Li, Ruth Welti, Xuemin Wang
    Plant Physiol. Oct 2006, 142 (2) 750-761; DOI: https://doi.org/10.1104/pp.106.085647

GENETICS, GENOMICS, AND MOLECULAR EVOLUTION

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    Self-Compatibility of Two Apricot Selections Is Associated with Two Pollen-Part Mutations of Different Nature
    Santiago Vilanova, María Luisa Badenes, Lorenzo Burgos, José Martínez-Calvo, Gerardo Llácer, Carlos Romero
    Plant Physiol. Oct 2006, 142 (2) 629-641; DOI: https://doi.org/10.1104/pp.106.083865

SYSTEMS BIOLOGY, MOLECULAR BIOLOGY, AND GENE REGULATION

  • Open Access
    Dual Temporal Role of Plastid Sigma Factor 6 in Arabidopsis Development
    Heike Loschelder, Jennifer Schweer, Brigitte Link, Gerhard Link
    Plant Physiol. Oct 2006, 142 (2) 642-650; DOI: https://doi.org/10.1104/pp.106.085878
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    Down-Regulation of the 26S Proteasome Subunit RPN9 Inhibits Viral Systemic Transport and Alters Plant Vascular Development
    Hailing Jin, Songtao Li, Andy Villegas Jr.
    Plant Physiol. Oct 2006, 142 (2) 651-661; DOI: https://doi.org/10.1104/pp.106.083519
  • Open Access
    Transcriptional Coordination of the Metabolic Network in Arabidopsis
    Hairong Wei, Staffan Persson, Tapan Mehta, Vinodh Srinivasasainagendra, Lang Chen, Grier P. Page, Chris Somerville, Ann Loraine
    Plant Physiol. Oct 2006, 142 (2) 762-774; DOI: https://doi.org/10.1104/pp.106.080358
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    Dehydroascorbate Reductase Affects Leaf Growth, Development, and Function
    Zhong Chen, Daniel R. Gallie
    Plant Physiol. Oct 2006, 142 (2) 775-787; DOI: https://doi.org/10.1104/pp.106.085506
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    The Frequency and Efficiency of Endogene Suppression by Transitive Silencing Signals Is Influenced by the Length of Sequence Homology
    Annick Bleys, Leen Vermeersch, Helena Van Houdt, Anna Depicker
    Plant Physiol. Oct 2006, 142 (2) 788-796; DOI: https://doi.org/10.1104/pp.106.083956
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    A Heteromeric RNA-Binding Protein Is Involved in Maintaining Acrophase and Period of the Circadian Clock
    Dobromir Iliev, Olga Voytsekh, Eva-Maria Schmidt, Monika Fiedler, Alla Nykytenko, Maria Mittag
    Plant Physiol. Oct 2006, 142 (2) 797-806; DOI: https://doi.org/10.1104/pp.106.085944
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Plant Physiology: 142 (2)
Plant Physiology
Vol. 142, Issue 2
October 2006
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  • ON THE INSIDE
  • EDITORIALS
  • BREAKTHROUGH TECHNOLOGIES
  • BIOINFORMATICS
  • GENOME ANALYSIS
  • BIOCHEMICAL PROCESSES AND MACROMOLECULAR STRUCTURES
  • BIOENERGETICS AND PHOTOSYNTHESIS
  • CELL BIOLOGY AND SIGNAL TRANSDUCTION
  • DEVELOPMENT AND HORMONE ACTION
  • ENVIRONMENTAL STRESS AND ADAPTATION TO STRESS
  • GENETICS, GENOMICS, AND MOLECULAR EVOLUTION
  • SYSTEMS BIOLOGY, MOLECULAR BIOLOGY, AND GENE REGULATION

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