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Table of Contents

Plant Physiology: 160 (2)
Oct 2012

ON THE INSIDE

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    On the Inside
    Peter V. Minorsky
    Plant Physiol. Oct 2012, 160 (2) 569-570; DOI: https://doi.org/10.1104/pp.112.900445

UPDATES

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    Plastid Proteostasis and Heterologous Protein Accumulation in Transplastomic Plants
    Francesca De Marchis, Andrea Pompa, Michele Bellucci
    Plant Physiol. Oct 2012, 160 (2) 571-581; DOI: https://doi.org/10.1104/pp.112.203778
  • You have accessRestricted Access
    Barley Stripe Mosaic Virus-Mediated Tools for Investigating Gene Function in Cereal Plants and Their Pathogens: Virus-Induced Gene Silencing, Host-Mediated Gene Silencing, and Virus-Mediated Overexpression of Heterologous Protein
    Wing-Sham Lee, Kim E. Hammond-Kosack, Kostya Kanyuka
    Plant Physiol. Oct 2012, 160 (2) 582-590; DOI: https://doi.org/10.1104/pp.112.203489

BREAKTHROUGH TECHNOLOGIES

  • Open Access
    Fast Isogenic Mapping-by-Sequencing of Ethyl Methanesulfonate-Induced Mutant Bulks
    Benjamin Hartwig, Geo Velikkakam James, Kathryn Konrad, Korbinian Schneeberger, Franziska Turck
    Plant Physiol. Oct 2012, 160 (2) 591-600; DOI: https://doi.org/10.1104/pp.112.200311
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    RNA Silencing Induced by an Artificial Sequence That Prevents Proper Transcription Termination in Rice
    Taiji Kawakatsu, Yuhya Wakasa, Hiroshi Yasuda, Fumio Takaiwa
    Plant Physiol. Oct 2012, 160 (2) 601-612; DOI: https://doi.org/10.1104/pp.112.202689

BIOINFORMATICS

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    Systematic Prediction of cis-Regulatory Elements in the Chlamydomonas reinhardtii Genome Using Comparative Genomics
    Jun Ding, Xiaoman Li, Haiyan Hu
    Plant Physiol. Oct 2012, 160 (2) 613-623; DOI: https://doi.org/10.1104/pp.112.200840

BIOCHEMICAL PROCESSES AND MACROMOLECULAR STRUCTURES

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    Plasma Membrane Localization of Solanum tuberosum Remorin from Group 1, Homolog 3 Is Mediated by Conformational Changes in a Novel C-Terminal Anchor and Required for the Restriction of Potato Virus X Movement]
    Artemis Perraki, Jean-Luc Cacas, Jean-Marc Crowet, Laurence Lins, Michel Castroviejo, Sylvie German-Retana, Sébastien Mongrand, Sylvain Raffaele
    Plant Physiol. Oct 2012, 160 (2) 624-637; DOI: https://doi.org/10.1104/pp.112.200519
  • Open Access
    A Land-Plant-Specific Glycerol-3-Phosphate Acyltransferase Family in Arabidopsis: Substrate Specificity, sn-2 Preference, and Evolution
    Weili Yang, Jeffrey P. Simpson, Yonghua Li-Beisson, Fred Beisson, Mike Pollard, John B. Ohlrogge
    Plant Physiol. Oct 2012, 160 (2) 638-652; DOI: https://doi.org/10.1104/pp.112.201996
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    Structural Characterization of Arabidopsis Leaf Arabinogalactan Polysaccharides
    Theodora Tryfona, Hui-Chung Liang, Toshihisa Kotake, Yoichi Tsumuraya, Elaine Stephens, Paul Dupree
    Plant Physiol. Oct 2012, 160 (2) 653-666; DOI: https://doi.org/10.1104/pp.112.202309
  • Open Access
    A Bifunctional Enzyme That Has Both Monoacylglycerol Acyltransferase and Acyl Hydrolase Activities
    Panneerselvam Vijayaraj, Charnitkaur B. Jashal, Anitha Vijayakumar, Sapa Hima Rani, D.K. Venkata Rao, Ram Rajasekharan
    Plant Physiol. Oct 2012, 160 (2) 667-683; DOI: https://doi.org/10.1104/pp.112.202135

BIOENERGETICS AND PHOTOSYNTHESIS

  • Open Access
    Antisense Reduction of NADP-Malic Enzyme in Flaveria bidentis Reduces Flow of CO2 through the C4 Cycle
    Jasper J.L. Pengelly, Jackie Tan, Robert T. Furbank, Susanne von Caemmerer
    Plant Physiol. Oct 2012, 160 (2) 1070-1080; DOI: https://doi.org/10.1104/pp.112.203240

CELL BIOLOGY AND SIGNAL TRANSDUCTION

  • Open Access
    A Chimeric Arabinogalactan Protein Promotes Somatic Embryogenesis in Cotton Cell Culture
    Simon Poon, Robyn Louise Heath, Adrienne Elizabeth Clarke
    Plant Physiol. Oct 2012, 160 (2) 684-695; DOI: https://doi.org/10.1104/pp.112.203075
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    The Rice Wall-Associated Receptor-Like Kinase Gene OsDEES1 Plays a Role in Female Gametophyte Development
    Na Wang, Hui-Jia Huang, Su-Ting Ren, Jiao-Jiao Li, Ying Sun, Da-Ye Sun, Su-Qiao Zhang
    Plant Physiol. Oct 2012, 160 (2) 696-707; DOI: https://doi.org/10.1104/pp.112.203943
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    Proteomic Analysis of Chloroplast-to-Chromoplast Transition in Tomato Reveals Metabolic Shifts Coupled with Disrupted Thylakoid Biogenesis Machinery and Elevated Energy-Production Components
    Cristina Barsan, Mohamed Zouine, Elie Maza, Wanping Bian, Isabel Egea, Michel Rossignol, David Bouyssie, Carole Pichereaux, Eduardo Purgatto, Mondher Bouzayen, Alain Latché, Jean-Claude Pech
    Plant Physiol. Oct 2012, 160 (2) 708-725; DOI: https://doi.org/10.1104/pp.112.203679
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    Complexes with Mixed Primary and Secondary Cellulose Synthases Are Functional in Arabidopsis Plants
    Andrew Carroll, Nasim Mansoori, Shundai Li, Lei Lei, Samantha Vernhettes, Richard G.F. Visser, Chris Somerville, Ying Gu, Luisa M. Trindade
    Plant Physiol. Oct 2012, 160 (2) 726-737; DOI: https://doi.org/10.1104/pp.112.199208

DEVELOPMENT AND HORMONE ACTION

  • Open Access
    Dissecting Functions of KATANIN and WRINKLED1 in Cotton Fiber Development by Virus-Induced Gene Silencing
    Jing Qu, Jian Ye, Yun-Feng Geng, Yan-Wei Sun, Shi-Qiang Gao, Bi-Pei Zhang, Wen Chen, Nam-Hai Chua
    Plant Physiol. Oct 2012, 160 (2) 738-748; DOI: https://doi.org/10.1104/pp.112.198564
  • Open Access
    Auxin and Epigenetic Regulation of SKP2B, an F-Box That Represses Lateral Root Formation
    Concepción Manzano, Elena Ramirez-Parra, Ilda Casimiro, Sofía Otero, Bénédicte Desvoyes, Bert De Rybel, Tom Beeckman, Pedro Casero, Crisanto Gutierrez, Juan C. del Pozo
    Plant Physiol. Oct 2012, 160 (2) 749-762; DOI: https://doi.org/10.1104/pp.112.198341
  • Open Access
    PIN Auxin Efflux Carriers Are Necessary for Pulse-Induced But Not Continuous Light-Induced Phototropism in Arabidopsis
    Ken Haga, Tatsuya Sakai
    Plant Physiol. Oct 2012, 160 (2) 763-776; DOI: https://doi.org/10.1104/pp.112.202432
  • Open Access
    New Insights into Roles of Cell Wall Invertase in Early Seed Development Revealed by Comprehensive Spatial and Temporal Expression Patterns of GhCWIN1 in Cotton
    Lu Wang, Yong-Ling Ruan
    Plant Physiol. Oct 2012, 160 (2) 777-787; DOI: https://doi.org/10.1104/pp.112.203893
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    CHIMERIC FLORAL ORGANS1, Encoding a Monocot-Specific MADS Box Protein, Regulates Floral Organ Identity in Rice
    Xianchun Sang, Yunfeng Li, Zengke Luo, Deyong Ren, Likui Fang, Nan Wang, Fangming Zhao, Yinghua Ling, Zhenglin Yang, Yongsheng Liu, Guanghua He
    Plant Physiol. Oct 2012, 160 (2) 788-807; DOI: https://doi.org/10.1104/pp.112.200980
  • Open Access
    Two Novel RING-Type Ubiquitin Ligases, RGLG3 and RGLG4, Are Essential for Jasmonate-Mediated Responses in Arabidopsis
    Xu Zhang, Qian Wu, Jiao Ren, Wanqiang Qian, Shanping He, Kuowei Huang, XiangChun Yu, Yin Gao, Ping Huang, Chengcai An
    Plant Physiol. Oct 2012, 160 (2) 808-822; DOI: https://doi.org/10.1104/pp.112.203422
  • Open Access
    LONO1 Encoding a Nucleoporin Is Required for Embryogenesis and Seed Viability in Arabidopsis
    Christopher Braud, Wenguang Zheng, Wenyan Xiao
    Plant Physiol. Oct 2012, 160 (2) 823-836; DOI: https://doi.org/10.1104/pp.112.202192
  • Open Access
    Characterization of the Fungal Gibberellin Desaturase as a 2-Oxoglutarate-Dependent Dioxygenase and Its Utilization for Enhancing Plant Growth
    Anjanabha Bhattacharya, Sofia Kourmpetli, Dennis A. Ward, Stephen G. Thomas, Fan Gong, Stephen J. Powers, Esther Carrera, Benjamin Taylor, Francisco Nuñez de Caceres Gonzalez, Bettina Tudzynski, Andrew L. Phillips, Michael R. Davey, Peter Hedden
    Plant Physiol. Oct 2012, 160 (2) 837-845; DOI: https://doi.org/10.1104/pp.112.201756

ENVIRONMENTAL STRESS AND ADAPTATION TO STRESS

  • Open Access
    Effects of Drought on Gene Expression in Maize Reproductive and Leaf Meristem Tissue Revealed by RNA-Seq
    Akshay Kakumanu, Madana M.R. Ambavaram, Curtis Klumas, Arjun Krishnan, Utlwang Batlang, Elijah Myers, Ruth Grene, Andy Pereira
    Plant Physiol. Oct 2012, 160 (2) 846-867; DOI: https://doi.org/10.1104/pp.112.200444
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    SNF1-Related Protein Kinases Type 2 Are Involved in Plant Responses to Cadmium Stress
    Anna Kulik, Anna Anielska-Mazur, Maria Bucholc, Emmanuel Koen, Katarzyna Szymańska, Agnieszka Żmieńko, Ewa Krzywińska, Izabela Wawer, Fionn McLoughlin, Dariusz Ruszkowski, Marek Figlerowicz, Christa Testerink, Aleksandra Skłodowska, David Wendehenne, Grażyna Dobrowolska
    Plant Physiol. Oct 2012, 160 (2) 868-883; DOI: https://doi.org/10.1104/pp.112.194472

GENETICS, GENOMICS, AND MOLECULAR EVOLUTION

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    Expansive Evolution of the TREHALOSE-6-PHOSPHATE PHOSPHATASE Gene Family in Arabidopsis
    Lies Vandesteene, Lorena López-Galvis, Kevin Vanneste, Regina Feil, Steven Maere, Willem Lammens, Filip Rolland, John E. Lunn, Nelson Avonce, Tom Beeckman, Patrick Van Dijck
    Plant Physiol. Oct 2012, 160 (2) 884-896; DOI: https://doi.org/10.1104/pp.112.201400

PLANTS INTERACTING WITH OTHER ORGANISMS

  • Open Access
    The SNARE Protein SYP71 Expressed in Vascular Tissues Is Involved in Symbiotic Nitrogen Fixation in Lotus japonicus Nodules
    Tsuneo Hakoyama, Ryo Oi, Kazuya Hazuma, Eri Suga, Yuka Adachi, Mayumi Kobayashi, Rie Akai, Shusei Sato, Eigo Fukai, Satoshi Tabata, Satoshi Shibata, Guo-Jiang Wu, Yoshihiro Hase, Atsushi Tanaka, Masayoshi Kawaguchi, Hiroshi Kouchi, Yosuke Umehara, Norio Suganuma
    Plant Physiol. Oct 2012, 160 (2) 897-905; DOI: https://doi.org/10.1104/pp.112.200782
  • Open Access
    Functional Assessment of the Medicago truncatula NIP/LATD Protein Demonstrates That It Is a High-Affinity Nitrate Transporter
    Rammyani Bagchi, Mohammad Salehin, O. Sarah Adeyemo, Carolina Salazar, Vladimir Shulaev, D. Janine Sherrier, Rebecca Dickstein
    Plant Physiol. Oct 2012, 160 (2) 906-916; DOI: https://doi.org/10.1104/pp.112.196444
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    Lotus japonicus ARPC1 Is Required for Rhizobial Infection
    Md Shakhawat Hossain, Jinqiu Liao, Euan K. James, Shusei Sato, Satoshi Tabata, Anna Jurkiewicz, Lene H. Madsen, Jens Stougaard, Loretta Ross, Krzysztof Szczyglowski
    Plant Physiol. Oct 2012, 160 (2) 917-928; DOI: https://doi.org/10.1104/pp.112.202572
  • Open Access
    HSPRO Controls Early Nicotiana attenuata Seedling Growth during Interaction with the Fungus Piriformospora indica
    Stefan Schuck, Iris Camehl, Paola A. Gilardoni, Ralf Oelmueller, Ian T. Baldwin, Gustavo Bonaventure
    Plant Physiol. Oct 2012, 160 (2) 929-943; DOI: https://doi.org/10.1104/pp.112.203976
  • Open Access
    The Effector SPRYSEC-19 of Globodera rostochiensis Suppresses CC-NB-LRR-Mediated Disease Resistance in Plants
    Wiebe J. Postma, Erik J. Slootweg, Sajid Rehman, Anna Finkers-Tomczak, Tom O.G. Tytgat, Kasper van Gelderen, Jose L. Lozano-Torres, Jan Roosien, Rikus Pomp, Casper van Schaik, Jaap Bakker, Aska Goverse, Geert Smant
    Plant Physiol. Oct 2012, 160 (2) 944-954; DOI: https://doi.org/10.1104/pp.112.200188
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    Nitric Oxide-Mediated Maintenance of Redox Homeostasis Contributes to NPR1-Dependent Plant Innate Immunity Triggered by Lipopolysaccharides
    Aizhen Sun, Shengjun Nie, Da Xing
    Plant Physiol. Oct 2012, 160 (2) 1081-1096; DOI: https://doi.org/10.1104/pp.112.201798

WHOLE PLANT AND ECOPHYSIOLOGY

  • Open Access
    Analysis of Xylem Sap from Functional (Nonembolized) and Nonfunctional (Embolized) Vessels of Populus nigra: Chemistry of Refilling
    Francesca Secchi, Maciej A. Zwieniecki
    Plant Physiol. Oct 2012, 160 (2) 955-964; DOI: https://doi.org/10.1104/pp.112.200824
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    The Grapevine Root-Specific Aquaporin VvPIP2;4N Controls Root Hydraulic Conductance and Leaf Gas Exchange under Well-Watered Conditions But Not under Water Stress
    Irene Perrone, Giorgio Gambino, Walter Chitarra, Marco Vitali, Chiara Pagliarani, Nadia Riccomagno, Raffaella Balestrini, Ralf Kaldenhoff, Norbert Uehlein, Ivana Gribaudo, Andrea Schubert, Claudio Lovisolo
    Plant Physiol. Oct 2012, 160 (2) 965-977; DOI: https://doi.org/10.1104/pp.112.203455
  • Open Access
    Diffusion Limitations in Root Uptake of Cadmium and Zinc, But Not Nickel, and Resulting Bias in the Michaelis Constant
    Fien Degryse, Afsaneh Shahbazi, Liesbeth Verheyen, Erik Smolders
    Plant Physiol. Oct 2012, 160 (2) 1097-1109; DOI: https://doi.org/10.1104/pp.112.202200
  • Open Access
    Stem Transcriptome Reveals Mechanisms to Reduce the Energetic Cost of Shade-Avoidance Responses in Tomato
    Juan Ignacio Cagnola, Edmundo Ploschuk, Tomás Benech-Arnold, Scott A. Finlayson, Jorge José Casal
    Plant Physiol. Oct 2012, 160 (2) 1110-1119; DOI: https://doi.org/10.1104/pp.112.201921
  • Open Access
    Composition and Physiological Function of the Wax Layers Coating Arabidopsis Leaves: β-Amyrin Negatively Affects the Intracuticular Water Barrier
    Christopher Buschhaus, Reinhard Jetter
    Plant Physiol. Oct 2012, 160 (2) 1120-1129; DOI: https://doi.org/10.1104/pp.112.198473
  • Open Access
    Green Revolution Trees: Semidwarfism Transgenes Modify Gibberellins, Promote Root Growth, Enhance Morphological Diversity, and Reduce Competitiveness in Hybrid Poplar
    Ani A. Elias, Victor B. Busov, Kevin R. Kosola, Cathleen Ma, Elizabeth Etherington, Olga Shevchenko, Harish Gandhi, David W. Pearce, Stewart B. Rood, Steven H. Strauss
    Plant Physiol. Oct 2012, 160 (2) 1130-1144; DOI: https://doi.org/10.1104/pp.112.200741

SYSTEMS BIOLOGY, MOLECULAR BIOLOGY, AND GENE REGULATION

  • Open Access
    Transparent Testa16 Plays Multiple Roles in Plant Development and Is Involved in Lipid Synthesis and Embryo Development in Canola
    Wei Deng, Guanqun Chen, Fred Peng, Martin Truksa, Crystal L. Snyder, Randall J. Weselake
    Plant Physiol. Oct 2012, 160 (2) 978-989; DOI: https://doi.org/10.1104/pp.112.198713
  • You have accessRestricted Access
    Roles of DICER-LIKE and ARGONAUTE Proteins in TAS-Derived Small Interfering RNA-Triggered DNA Methylation
    Liang Wu, Long Mao, Yijun Qi
    Plant Physiol. Oct 2012, 160 (2) 990-999; DOI: https://doi.org/10.1104/pp.112.200279
  • Open Access
    Positive Regulation of psbA Gene Expression by cis-Encoded Antisense RNAs in Synechocystis sp. PCC 6803
    Isamu Sakurai, Damir Stazic, Marion Eisenhut, Eerika Vuorio, Claudia Steglich, Wolfgang R. Hess, Eva-Mari Aro
    Plant Physiol. Oct 2012, 160 (2) 1000-1010; DOI: https://doi.org/10.1104/pp.112.202127
  • Open Access
    MdCOP1 Ubiquitin E3 Ligases Interact with MdMYB1 to Regulate Light-Induced Anthocyanin Biosynthesis and Red Fruit Coloration in Apple
    Yuan-Yuan Li, Ke Mao, Cheng Zhao, Xian-Yan Zhao, Hua-Lei Zhang, Huai-Rui Shu, Yu-Jin Hao
    Plant Physiol. Oct 2012, 160 (2) 1011-1022; DOI: https://doi.org/10.1104/pp.112.199703
  • Open Access
    The Effect of TRANSPARENT TESTA2 on Seed Fatty Acid Biosynthesis and Tolerance to Environmental Stresses during Young Seedling Establishment in Arabidopsis
    Mingxun Chen, Zhong Wang, Yana Zhu, Zhilan Li, Nazim Hussain, Lijie Xuan, Wanli Guo, Guoping Zhang, Lixi Jiang
    Plant Physiol. Oct 2012, 160 (2) 1023-1036; DOI: https://doi.org/10.1104/pp.112.202945
  • You have accessRestricted Access
    Putative Glycosyltransferases and Other Plant Golgi Apparatus Proteins Are Revealed by LOPIT Proteomics
    Nino Nikolovski, Denis Rubtsov, Marcelo P. Segura, Godfrey P. Miles, Tim J. Stevens, Tom P.J. Dunkley, Sean Munro, Kathryn S. Lilley, Paul Dupree
    Plant Physiol. Oct 2012, 160 (2) 1037-1051; DOI: https://doi.org/10.1104/pp.112.204263
  • Open Access
    A Set of Regioselective O-Methyltransferases Gives Rise to the Complex Pattern of Methoxylated Flavones in Sweet Basil
    Anna Berim, David C. Hyatt, David R. Gang
    Plant Physiol. Oct 2012, 160 (2) 1052-1069; DOI: https://doi.org/10.1104/pp.112.204164

CORRECTIONS

  • You have accessRestricted Access
    CORRECTIONS
    Plant Physiol. Oct 2012, 160 (2) 1145; DOI: https://doi.org/10.1104/pp.112.900446
  • You have accessRestricted Access
    CORRECTIONS
    Plant Physiol. Oct 2012, 160 (2) 1146; DOI: https://doi.org/10.1104/pp.112.900447
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Plant Physiology: 160 (2)
Plant Physiology
Vol. 160, Issue 2
Oct 2012
  • Table of Contents
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  • ON THE INSIDE
  • UPDATES
  • BREAKTHROUGH TECHNOLOGIES
  • BIOINFORMATICS
  • BIOCHEMICAL PROCESSES AND MACROMOLECULAR STRUCTURES
  • BIOENERGETICS AND PHOTOSYNTHESIS
  • CELL BIOLOGY AND SIGNAL TRANSDUCTION
  • DEVELOPMENT AND HORMONE ACTION
  • ENVIRONMENTAL STRESS AND ADAPTATION TO STRESS
  • GENETICS, GENOMICS, AND MOLECULAR EVOLUTION
  • PLANTS INTERACTING WITH OTHER ORGANISMS
  • WHOLE PLANT AND ECOPHYSIOLOGY
  • SYSTEMS BIOLOGY, MOLECULAR BIOLOGY, AND GENE REGULATION
  • CORRECTIONS

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