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Table of Contents

Plant Physiology: 164 (1)
Jan 2014
  • A
  • B
  • C
  • D
  • E
  • F
  • G
  • H
  • I
  • J
  • K
  • L
  • M
  • N
  • O
  • P
  • Q
  • R
  • S
  • T
  • U
  • V
  • W
  • X
  • Y
  • Z

A

  1. Abdulla, Nuradin Y.

    1. Do Plants Contain G Protein-Coupled Receptors?
      Open Access
      Do Plants Contain G Protein-Coupled Receptors?
      Bruck Taddese, Graham J.G. Upton, Gregory R. Bailey, Siân R.D. Jordan, Nuradin Y. Abdulla, Philip J. Reeves, Christopher A. Reynolds
      Plant Physiol. Jan 2014, 164 (1) 287-307; DOI: https://doi.org/10.1104/pp.113.228874

      GCR1 shares the fold and key functional motifs of class A, class B, and class E G protein-coupled receptors.

  2. Alquézar, Berta

    1. Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      You have accessRestricted Access
      Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      Ana Rodríguez, Takehiko Shimada, Magdalena Cervera, Berta Alquézar, José Gadea, Aurelio Gómez-Cadenas, Carlos José De Ollas, María Jesús Rodrigo, Lorenzo Zacarías, Leandro Peña
      Plant Physiol. Jan 2014, 164 (1) 321-339; DOI: https://doi.org/10.1104/pp.113.224279

      Down-regulation of a d-limonene synthase gene in orange fruit triggers defense cascades linked to isoprenoid metabolism and resistance to necrotroph pathogens.

  3. Anca, Iulia-Andra

    1. Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      You have accessRestricted Access
      Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      Patricia Gerbeau-Pissot, Christophe Der, Dominique Thomas, Iulia-Andra Anca, Kevin Grosjean, Yann Roche, Jean-Marie Perrier-Cornet, Sébastien Mongrand, Françoise Simon-Plas
      Plant Physiol. Jan 2014, 164 (1) 273-286; DOI: https://doi.org/10.1104/pp.113.225755

      The ordering and organization of the plasma membrane of tobacco suspension cells as well as membrane fluidity, is modified during the early steps of the signaling cascade induced by an elicitor of defense reactions.

  4. Aoki, Koh

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  5. Aradhya, Mallikarjuna

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  6. Arbona, Vicent

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  7. Ariyadasa, Ruvini

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  8. Ávila, Concepción

    1. Deciphering the Role of Aspartate and Prephenate Aminotransferase Activities in Plastid Nitrogen Metabolism
      Open Access
      Deciphering the Role of Aspartate and Prephenate Aminotransferase Activities in Plastid Nitrogen Metabolism
      Fernando de la Torre, Jorge El-Azaz, Concepción Ávila, Francisco M. Cánovas
      Plant Physiol. Jan 2014, 164 (1) 92-104; DOI: https://doi.org/10.1104/pp.113.232462

      Molecular and metabolic analysis in tobacco plants after virus-induced gene silencing uncovers different pathways of amino acid biosynthesis within the plastids.

B

  1. Bailey, Gregory R.

    1. Do Plants Contain G Protein-Coupled Receptors?
      Open Access
      Do Plants Contain G Protein-Coupled Receptors?
      Bruck Taddese, Graham J.G. Upton, Gregory R. Bailey, Siân R.D. Jordan, Nuradin Y. Abdulla, Philip J. Reeves, Christopher A. Reynolds
      Plant Physiol. Jan 2014, 164 (1) 287-307; DOI: https://doi.org/10.1104/pp.113.228874

      GCR1 shares the fold and key functional motifs of class A, class B, and class E G protein-coupled receptors.

  2. Barkan, Alice

    1. A Major Role for the Plastid-Encoded RNA Polymerase Complex in the Expression of Plastid Transfer RNAs
      Open Access
      A Major Role for the Plastid-Encoded RNA Polymerase Complex in the Expression of Plastid Transfer RNAs
      Rosalind Williams-Carrier, Reimo Zoschke, Susan Belcher, Jeannette Pfalz, Alice Barkan
      Plant Physiol. Jan 2014, 164 (1) 239-248; DOI: https://doi.org/10.1104/pp.113.228726

      Proteins that associate with the plastid-encoded RNA polymerase are required for robust expression of numerous plastid tRNAs.

  3. Barry, Cornelius S.

    1. Determination of Residues Responsible for Substrate and Product Specificity of <em>Solanum habrochaites</em> Short-Chain cis-Prenyltransferases
      Open Access
      Determination of Residues Responsible for Substrate and Product Specificity of Solanum habrochaites Short-Chain cis-Prenyltransferases
      Jin-Ho Kang, Eliana Gonzales-Vigil, Yuki Matsuba, Eran Pichersky, Cornelius S. Barry
      Plant Physiol. Jan 2014, 164 (1) 80-91; DOI: https://doi.org/10.1104/pp.113.230466

      The relative positions of aromatic amino acids and adjacent residues within domain II of short-chain cis-prenyltransferases contributes to the evolution of volatile terpene biosynthesis in Solanum species trichomes.

  4. Baumgarten, Vanessa

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  5. Belcher, Susan

    1. A Major Role for the Plastid-Encoded RNA Polymerase Complex in the Expression of Plastid Transfer RNAs
      Open Access
      A Major Role for the Plastid-Encoded RNA Polymerase Complex in the Expression of Plastid Transfer RNAs
      Rosalind Williams-Carrier, Reimo Zoschke, Susan Belcher, Jeannette Pfalz, Alice Barkan
      Plant Physiol. Jan 2014, 164 (1) 239-248; DOI: https://doi.org/10.1104/pp.113.228726

      Proteins that associate with the plastid-encoded RNA polymerase are required for robust expression of numerous plastid tRNAs.

  6. Bellasio, Chandra

    1. The Operation of Two Decarboxylases, Transamination, and Partitioning of C<sub>4</sub> Metabolic Processes between Mesophyll and Bundle Sheath Cells Allows Light Capture To Be Balanced for the Maize C<sub>4</sub> Pathway
      You have accessRestricted Access
      The Operation of Two Decarboxylases, Transamination, and Partitioning of C4 Metabolic Processes between Mesophyll and Bundle Sheath Cells Allows Light Capture To Be Balanced for the Maize C4 Pathway
      Chandra Bellasio, Howard Griffiths
      Plant Physiol. Jan 2014, 164 (1) 466-480; DOI: https://doi.org/10.1104/pp.113.228221

      Light quality was used to manipulate ATP supply and demand between C4 pathway mesophyll and bundle sheath, and the results are consistent with a metabolic model that explains the requirement for two decarboxylases and the partitioning of metabolic activities in maize.

  7. Berbel, Ana

    1. Regulation of Compound Leaf Development by <em>PHANTASTICA</em> in <em>Medicago truncatula</em>
      Open Access
      Regulation of Compound Leaf Development by PHANTASTICA in Medicago truncatula
      Liangfa Ge, Jianling Peng, Ana Berbel, Francisco Madueño, Rujin Chen
      Plant Physiol. Jan 2014, 164 (1) 216-228; DOI: https://doi.org/10.1104/pp.113.229914

      A MYB domain protein maintains petiole identity by repressing expression of a motor organ identity gene and promoting petiole and stipule development in Medicago truncatula.

  8. Bevan, Michael W.

    1. Glucose Elevates NITRATE TRANSPORTER2.1 Protein Levels and Nitrate Transport Activity Independently of Its HEXOKINASE1-Mediated Stimulation of <em>NITRATE TRANSPORTER2.1</em> Expression
      Open Access
      Glucose Elevates NITRATE TRANSPORTER2.1 Protein Levels and Nitrate Transport Activity Independently of Its HEXOKINASE1-Mediated Stimulation of NITRATE TRANSPORTER2.1 Expression
      Femke de Jong, Kate Thodey, Laurence V. Lejay, Michael W. Bevan
      Plant Physiol. Jan 2014, 164 (1) 308-320; DOI: https://doi.org/10.1104/pp.113.230599

      Independent mechanisms link photosynthate availability with nitrate uptake and assimilation into amino acids.

  9. Blatt, Mike

    1. Open Access
      Plant Physiology Sees the Light
      John Christie, Mike Blatt
      Plant Physiol. Jan 2014, 164 (1) 12; DOI: https://doi.org/10.1104/pp.113.900477
  10. Bock, Ralph

    1. RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      You have accessRestricted Access
      RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      Rikard Fristedt, Lars B. Scharff, Cornelia A. Clarke, Qin Wang, Chentao Lin, Sabeeha S. Merchant, Ralph Bock
      Plant Physiol. Jan 2014, 164 (1) 201-215; DOI: https://doi.org/10.1104/pp.113.228338

      A plant homolog of a bacterial ribosome biogenesis factor functions in chloroplasts, associates with thylakoid membranes, and is involved in maturation of ribosomal RNA.

  11. Bolduc, Nathalie

    1. Unequal Redundancy in Maize <em>knotted1 homeobox</em> Genes
      Open Access
      Unequal Redundancy in Maize knotted1 homeobox Genes
      Nathalie Bolduc, Randall G. Tyers, Michael Freeling, Sarah Hake
      Plant Physiol. Jan 2014, 164 (1) 229-238; DOI: https://doi.org/10.1104/pp.113.228791

      A homeobox gene plays a critical, dosage-dependent role in shoot apical meristem establishment and maintenance, stem elongation, and inflorescence development that is only uncovered in a knotted1 mutant background.

  12. Briggs, Winslow R.

    1. Phototropism: Some History, Some Puzzles, and a Look Ahead
      You have accessRestricted Access
      Phototropism: Some History, Some Puzzles, and a Look Ahead
      Winslow R. Briggs
      Plant Physiol. Jan 2014, 164 (1) 13-23; DOI: https://doi.org/10.1104/pp.113.230573

      After over a century of progress, phototropism research still presents some fascinating challenges.

  13. Bruinsma, Kristie A.

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  14. Bu, Qingyun

    1. Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Open Access
      Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Qingyun Bu, Tianxiao Lv, Hui Shen, Phi Luong, Jimmy Wang, Zhenyu Wang, Zhigang Huang, Langtao Xiao, Cawas Engineer, Tae Houn Kim, Julian I. Schroeder, Enamul Huq
      Plant Physiol. Jan 2014, 164 (1) 424-439; DOI: https://doi.org/10.1104/pp.113.226837

      An F-box protein regulates drought and osmotic stress responses in a strigolactone-independent manner in Arabidopsis.

  15. Buckler, Edward S.

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  16. Bussell, John D.

    1. Peroxisomal ATP-Binding Cassette Transporter COMATOSE and the Multifunctional Protein ABNORMAL INFLORESCENCE MERISTEM Are Required for the Production of Benzoylated Metabolites in Arabidopsis Seeds
      You have accessRestricted Access
      Peroxisomal ATP-Binding Cassette Transporter COMATOSE and the Multifunctional Protein ABNORMAL INFLORESCENCE MERISTEM Are Required for the Production of Benzoylated Metabolites in Arabidopsis Seeds
      John D. Bussell, Michael Reichelt, Andrew A.G. Wiszniewski, Jonathan Gershenzon, Steven M. Smith
      Plant Physiol. Jan 2014, 164 (1) 48-54; DOI: https://doi.org/10.1104/pp.113.229807

      A peroxisomal substrate transporter and β-oxidation provide benzoic acid for the accumulation of benzoylated secondary metabolites during Arabidopsis seed development.

C

  1. Cabeza, Ricardo

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  2. Cánovas, Francisco M.

    1. Deciphering the Role of Aspartate and Prephenate Aminotransferase Activities in Plastid Nitrogen Metabolism
      Open Access
      Deciphering the Role of Aspartate and Prephenate Aminotransferase Activities in Plastid Nitrogen Metabolism
      Fernando de la Torre, Jorge El-Azaz, Concepción Ávila, Francisco M. Cánovas
      Plant Physiol. Jan 2014, 164 (1) 92-104; DOI: https://doi.org/10.1104/pp.113.232462

      Molecular and metabolic analysis in tobacco plants after virus-induced gene silencing uncovers different pathways of amino acid biosynthesis within the plastids.

  3. Cazaux, Marc

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  4. Cervera, Magdalena

    1. Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      You have accessRestricted Access
      Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      Ana Rodríguez, Takehiko Shimada, Magdalena Cervera, Berta Alquézar, José Gadea, Aurelio Gómez-Cadenas, Carlos José De Ollas, María Jesús Rodrigo, Lorenzo Zacarías, Leandro Peña
      Plant Physiol. Jan 2014, 164 (1) 321-339; DOI: https://doi.org/10.1104/pp.113.224279

      Down-regulation of a d-limonene synthase gene in orange fruit triggers defense cascades linked to isoprenoid metabolism and resistance to necrotroph pathogens.

  5. Chen, Rujin

    1. Regulation of Compound Leaf Development by <em>PHANTASTICA</em> in <em>Medicago truncatula</em>
      Open Access
      Regulation of Compound Leaf Development by PHANTASTICA in Medicago truncatula
      Liangfa Ge, Jianling Peng, Ana Berbel, Francisco Madueño, Rujin Chen
      Plant Physiol. Jan 2014, 164 (1) 216-228; DOI: https://doi.org/10.1104/pp.113.229914

      A MYB domain protein maintains petiole identity by repressing expression of a motor organ identity gene and promoting petiole and stipule development in Medicago truncatula.

  6. Chitwood, Daniel H.

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  7. Christie, John

    1. Open Access
      Plant Physiology Sees the Light
      John Christie, Mike Blatt
      Plant Physiol. Jan 2014, 164 (1) 12; DOI: https://doi.org/10.1104/pp.113.900477
  8. Clark, Richard M.

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  9. Clarke, Cornelia A.

    1. RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      You have accessRestricted Access
      RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      Rikard Fristedt, Lars B. Scharff, Cornelia A. Clarke, Qin Wang, Chentao Lin, Sabeeha S. Merchant, Ralph Bock
      Plant Physiol. Jan 2014, 164 (1) 201-215; DOI: https://doi.org/10.1104/pp.113.228338

      A plant homolog of a bacterial ribosome biogenesis factor functions in chloroplasts, associates with thylakoid membranes, and is involved in maturation of ribosomal RNA.

  10. Cluzet, Stéphanie

    1. The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Open Access
      The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Philippe Nicolas, David Lecourieux, Christian Kappel, Stéphanie Cluzet, Grant Cramer, Serge Delrot, Fatma Lecourieux
      Plant Physiol. Jan 2014, 164 (1) 365-383; DOI: https://doi.org/10.1104/pp.113.231977

      A basic leucine zipper family transcription factor is an important transcriptional regulator of abscisic acid-dependent grape berry ripening.

  11. Collins, Carina A.

    1. Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      Open Access
      Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      John M. Smith, Daniel J. Salamango, Michelle E. Leslie, Carina A. Collins, Antje Heese
      Plant Physiol. Jan 2014, 164 (1) 440-454; DOI: https://doi.org/10.1104/pp.113.229179

      Ligand-induced degradation of endogenous flagellin receptor desensitizes cells to its stimulus, likely to remove ligand-bound receptors from the site of perception, and subsequent de novo receptor synthesis resensitizes cells for a new round of stimulus perception.

  12. Covington, Michael F.

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  13. Cramer, Grant

    1. The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Open Access
      The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Philippe Nicolas, David Lecourieux, Christian Kappel, Stéphanie Cluzet, Grant Cramer, Serge Delrot, Fatma Lecourieux
      Plant Physiol. Jan 2014, 164 (1) 365-383; DOI: https://doi.org/10.1104/pp.113.231977

      A basic leucine zipper family transcription factor is an important transcriptional regulator of abscisic acid-dependent grape berry ripening.

D

  1. de Jong, Femke

    1. Glucose Elevates NITRATE TRANSPORTER2.1 Protein Levels and Nitrate Transport Activity Independently of Its HEXOKINASE1-Mediated Stimulation of <em>NITRATE TRANSPORTER2.1</em> Expression
      Open Access
      Glucose Elevates NITRATE TRANSPORTER2.1 Protein Levels and Nitrate Transport Activity Independently of Its HEXOKINASE1-Mediated Stimulation of NITRATE TRANSPORTER2.1 Expression
      Femke de Jong, Kate Thodey, Laurence V. Lejay, Michael W. Bevan
      Plant Physiol. Jan 2014, 164 (1) 308-320; DOI: https://doi.org/10.1104/pp.113.230599

      Independent mechanisms link photosynthate availability with nitrate uptake and assimilation into amino acids.

  2. de la Torre, Fernando

    1. Deciphering the Role of Aspartate and Prephenate Aminotransferase Activities in Plastid Nitrogen Metabolism
      Open Access
      Deciphering the Role of Aspartate and Prephenate Aminotransferase Activities in Plastid Nitrogen Metabolism
      Fernando de la Torre, Jorge El-Azaz, Concepción Ávila, Francisco M. Cánovas
      Plant Physiol. Jan 2014, 164 (1) 92-104; DOI: https://doi.org/10.1104/pp.113.232462

      Molecular and metabolic analysis in tobacco plants after virus-induced gene silencing uncovers different pathways of amino acid biosynthesis within the plastids.

  3. Delrot, Serge

    1. The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Open Access
      The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Philippe Nicolas, David Lecourieux, Christian Kappel, Stéphanie Cluzet, Grant Cramer, Serge Delrot, Fatma Lecourieux
      Plant Physiol. Jan 2014, 164 (1) 365-383; DOI: https://doi.org/10.1104/pp.113.231977

      A basic leucine zipper family transcription factor is an important transcriptional regulator of abscisic acid-dependent grape berry ripening.

  4. De Ollas, Carlos José

    1. Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      You have accessRestricted Access
      Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      Ana Rodríguez, Takehiko Shimada, Magdalena Cervera, Berta Alquézar, José Gadea, Aurelio Gómez-Cadenas, Carlos José De Ollas, María Jesús Rodrigo, Lorenzo Zacarías, Leandro Peña
      Plant Physiol. Jan 2014, 164 (1) 321-339; DOI: https://doi.org/10.1104/pp.113.224279

      Down-regulation of a d-limonene synthase gene in orange fruit triggers defense cascades linked to isoprenoid metabolism and resistance to necrotroph pathogens.

  5. Der, Christophe

    1. Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      You have accessRestricted Access
      Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      Patricia Gerbeau-Pissot, Christophe Der, Dominique Thomas, Iulia-Andra Anca, Kevin Grosjean, Yann Roche, Jean-Marie Perrier-Cornet, Sébastien Mongrand, Françoise Simon-Plas
      Plant Physiol. Jan 2014, 164 (1) 273-286; DOI: https://doi.org/10.1104/pp.113.225755

      The ordering and organization of the plasma membrane of tobacco suspension cells as well as membrane fluidity, is modified during the early steps of the signaling cascade induced by an elicitor of defense reactions.

  6. Diaz, Isabel

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  7. Dirks, Jan

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  8. Dittert, Klaus

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  9. Dixon, Jack E.

    1. Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on <em>S</em>-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Open Access
      Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on S-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Dong Qi, Ullrich Dubiella, Sang Hee Kim, D. Isaiah Sloss, Robert H. Dowen, Jack E. Dixon, Roger W. Innes
      Plant Physiol. Jan 2014, 164 (1) 340-351; DOI: https://doi.org/10.1104/pp.113.227686

      A nucleotide-binding protein distinguishes among closely related protein kinases based on plasma membrane localization and an exposed loop in the C-terminal third of the kinase domain.

  10. Döll, Stefanie

    1. Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Open Access
      Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Nicole B. Schmid, Ricardo F.H. Giehl, Stefanie Döll, Hans-Peter Mock, Nadine Strehmel, Dierk Scheel, Xiaole Kong, Robert C. Hider, Nicolaus von Wirén
      Plant Physiol. Jan 2014, 164 (1) 160-172; DOI: https://doi.org/10.1104/pp.113.228544

      The release of F coumarins is a component of the reduction-based iron acquisition machinery that helps plants to mobilize iron under alkaline conditions.

  11. Dou, Yongchao

    1. Deletion Mutagenesis Identifies a Haploinsufficient Role for γ-Zein in <em>opaque2</em> Endosperm Modification
      Open Access
      Deletion Mutagenesis Identifies a Haploinsufficient Role for γ-Zein in opaque2 Endosperm Modification
      Lingling Yuan, Yongchao Dou, Shahryar F. Kianian, Chi Zhang, David R. Holding
      Plant Physiol. Jan 2014, 164 (1) 119-130; DOI: https://doi.org/10.1104/pp.113.230961

      A haploinsufficient role is identified for γ-zein in maize mutant endosperm modification.

  12. Dowen, Robert H.

    1. Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on <em>S</em>-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Open Access
      Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on S-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Dong Qi, Ullrich Dubiella, Sang Hee Kim, D. Isaiah Sloss, Robert H. Dowen, Jack E. Dixon, Roger W. Innes
      Plant Physiol. Jan 2014, 164 (1) 340-351; DOI: https://doi.org/10.1104/pp.113.227686

      A nucleotide-binding protein distinguishes among closely related protein kinases based on plasma membrane localization and an exposed loop in the C-terminal third of the kinase domain.

  13. Downs, Nora

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  14. Drincovich, María F.

    1. Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Open Access
      Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Sebastian Klie, Sonia Osorio, Takayuki Tohge, María F. Drincovich, Aaron Fait, James J. Giovannoni, Alisdair R. Fernie, Zoran Nikoloski
      Plant Physiol. Jan 2014, 164 (1) 55-68; DOI: https://doi.org/10.1104/pp.113.226142

      STATIS analysis of metabolic profiles discerns conserved metabolic processes during development and ripening across fruits.

  15. Dubiella, Ullrich

    1. Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on <em>S</em>-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Open Access
      Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on S-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Dong Qi, Ullrich Dubiella, Sang Hee Kim, D. Isaiah Sloss, Robert H. Dowen, Jack E. Dixon, Roger W. Innes
      Plant Physiol. Jan 2014, 164 (1) 340-351; DOI: https://doi.org/10.1104/pp.113.227686

      A nucleotide-binding protein distinguishes among closely related protein kinases based on plasma membrane localization and an exposed loop in the C-terminal third of the kinase domain.

E

  1. El-Azaz, Jorge

    1. Deciphering the Role of Aspartate and Prephenate Aminotransferase Activities in Plastid Nitrogen Metabolism
      Open Access
      Deciphering the Role of Aspartate and Prephenate Aminotransferase Activities in Plastid Nitrogen Metabolism
      Fernando de la Torre, Jorge El-Azaz, Concepción Ávila, Francisco M. Cánovas
      Plant Physiol. Jan 2014, 164 (1) 92-104; DOI: https://doi.org/10.1104/pp.113.232462

      Molecular and metabolic analysis in tobacco plants after virus-induced gene silencing uncovers different pathways of amino acid biosynthesis within the plastids.

  2. Elberse, Joyce

    1. Fungal Endopolygalacturonases Are Recognized as Microbe-Associated Molecular Patterns by the Arabidopsis Receptor-Like Protein RESPONSIVENESS TO BOTRYTIS POLYGALACTURONASES1
      You have accessRestricted Access
      Fungal Endopolygalacturonases Are Recognized as Microbe-Associated Molecular Patterns by the Arabidopsis Receptor-Like Protein RESPONSIVENESS TO BOTRYTIS POLYGALACTURONASES1
      Lisha Zhang, Ilona Kars, Bert Essenstam, Thomas W.H. Liebrand, Lia Wagemakers, Joyce Elberse, Panagiota Tagkalaki, Devlin Tjoitang, Guido van den Ackerveken, Jan A.L. van Kan
      Plant Physiol. Jan 2014, 164 (1) 352-364; DOI: https://doi.org/10.1104/pp.113.230698

      Fungal pectin-degrading enzymes act as microbe-associated molecular patterns that are recognized by a pattern recognition receptor from Arabidopsis.

  3. Engineer, Cawas

    1. Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Open Access
      Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Qingyun Bu, Tianxiao Lv, Hui Shen, Phi Luong, Jimmy Wang, Zhenyu Wang, Zhigang Huang, Langtao Xiao, Cawas Engineer, Tae Houn Kim, Julian I. Schroeder, Enamul Huq
      Plant Physiol. Jan 2014, 164 (1) 424-439; DOI: https://doi.org/10.1104/pp.113.226837

      An F-box protein regulates drought and osmotic stress responses in a strigolactone-independent manner in Arabidopsis.

  4. Ens, Cherise

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  5. Essenstam, Bert

    1. Fungal Endopolygalacturonases Are Recognized as Microbe-Associated Molecular Patterns by the Arabidopsis Receptor-Like Protein RESPONSIVENESS TO BOTRYTIS POLYGALACTURONASES1
      You have accessRestricted Access
      Fungal Endopolygalacturonases Are Recognized as Microbe-Associated Molecular Patterns by the Arabidopsis Receptor-Like Protein RESPONSIVENESS TO BOTRYTIS POLYGALACTURONASES1
      Lisha Zhang, Ilona Kars, Bert Essenstam, Thomas W.H. Liebrand, Lia Wagemakers, Joyce Elberse, Panagiota Tagkalaki, Devlin Tjoitang, Guido van den Ackerveken, Jan A.L. van Kan
      Plant Physiol. Jan 2014, 164 (1) 352-364; DOI: https://doi.org/10.1104/pp.113.230698

      Fungal pectin-degrading enzymes act as microbe-associated molecular patterns that are recognized by a pattern recognition receptor from Arabidopsis.

F

  1. Fait, Aaron

    1. Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Open Access
      Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Sebastian Klie, Sonia Osorio, Takayuki Tohge, María F. Drincovich, Aaron Fait, James J. Giovannoni, Alisdair R. Fernie, Zoran Nikoloski
      Plant Physiol. Jan 2014, 164 (1) 55-68; DOI: https://doi.org/10.1104/pp.113.226142

      STATIS analysis of metabolic profiles discerns conserved metabolic processes during development and ripening across fruits.

  2. Felder, Marius

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  3. Felderer, Bernd

    1. Recovering Root System Traits Using Image Analysis Exemplified by Two-Dimensional Neutron Radiography Images of Lupine
      Open Access
      Recovering Root System Traits Using Image Analysis Exemplified by Two-Dimensional Neutron Radiography Images of Lupine
      Daniel Leitner, Bernd Felderer, Peter Vontobel, Andrea Schnepf
      Plant Physiol. Jan 2014, 164 (1) 24-35; DOI: https://doi.org/10.1104/pp.113.227892

      Image-based parameterization of root architectural models is advanced by a new approach for the analysis of image sequences of plant root systems.

  4. Fernie, Alisdair R.

    1. Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Open Access
      Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Sebastian Klie, Sonia Osorio, Takayuki Tohge, María F. Drincovich, Aaron Fait, James J. Giovannoni, Alisdair R. Fernie, Zoran Nikoloski
      Plant Physiol. Jan 2014, 164 (1) 55-68; DOI: https://doi.org/10.1104/pp.113.226142

      STATIS analysis of metabolic profiles discerns conserved metabolic processes during development and ripening across fruits.

  5. Freeling, Michael

    1. Unequal Redundancy in Maize <em>knotted1 homeobox</em> Genes
      Open Access
      Unequal Redundancy in Maize knotted1 homeobox Genes
      Nathalie Bolduc, Randall G. Tyers, Michael Freeling, Sarah Hake
      Plant Physiol. Jan 2014, 164 (1) 229-238; DOI: https://doi.org/10.1104/pp.113.228791

      A homeobox gene plays a critical, dosage-dependent role in shoot apical meristem establishment and maintenance, stem elongation, and inflorescence development that is only uncovered in a knotted1 mutant background.

  6. Frenkel, Zeev

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  7. Fristedt, Rikard

    1. RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      You have accessRestricted Access
      RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      Rikard Fristedt, Lars B. Scharff, Cornelia A. Clarke, Qin Wang, Chentao Lin, Sabeeha S. Merchant, Ralph Bock
      Plant Physiol. Jan 2014, 164 (1) 201-215; DOI: https://doi.org/10.1104/pp.113.228338

      A plant homolog of a bacterial ribosome biogenesis factor functions in chloroplasts, associates with thylakoid membranes, and is involved in maturation of ribosomal RNA.

  8. Fujiwara, Masayuki

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  9. Fukao, Yoichiro

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  10. Fukayama, Hiroshi

    1. Unusual Small Subunit That Is Not Expressed in Photosynthetic Cells Alters the Catalytic Properties of Rubisco in Rice
      Open Access
      Unusual Small Subunit That Is Not Expressed in Photosynthetic Cells Alters the Catalytic Properties of Rubisco in Rice
      Koichi Morita, Tomoko Hatanaka, Shuji Misoo, Hiroshi Fukayama
      Plant Physiol. Jan 2014, 164 (1) 69-79; DOI: https://doi.org/10.1104/pp.113.228015

      Rice utilizes different type of Rubisco small subunit in nonphotosynthetic cells.

G

  1. Gadea, José

    1. Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      You have accessRestricted Access
      Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      Ana Rodríguez, Takehiko Shimada, Magdalena Cervera, Berta Alquézar, José Gadea, Aurelio Gómez-Cadenas, Carlos José De Ollas, María Jesús Rodrigo, Lorenzo Zacarías, Leandro Peña
      Plant Physiol. Jan 2014, 164 (1) 321-339; DOI: https://doi.org/10.1104/pp.113.224279

      Down-regulation of a d-limonene synthase gene in orange fruit triggers defense cascades linked to isoprenoid metabolism and resistance to necrotroph pathogens.

  2. Ge, Liangfa

    1. Regulation of Compound Leaf Development by <em>PHANTASTICA</em> in <em>Medicago truncatula</em>
      Open Access
      Regulation of Compound Leaf Development by PHANTASTICA in Medicago truncatula
      Liangfa Ge, Jianling Peng, Ana Berbel, Francisco Madueño, Rujin Chen
      Plant Physiol. Jan 2014, 164 (1) 216-228; DOI: https://doi.org/10.1104/pp.113.229914

      A MYB domain protein maintains petiole identity by repressing expression of a motor organ identity gene and promoting petiole and stipule development in Medicago truncatula.

  3. Gerbeau-Pissot, Patricia

    1. Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      You have accessRestricted Access
      Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      Patricia Gerbeau-Pissot, Christophe Der, Dominique Thomas, Iulia-Andra Anca, Kevin Grosjean, Yann Roche, Jean-Marie Perrier-Cornet, Sébastien Mongrand, Françoise Simon-Plas
      Plant Physiol. Jan 2014, 164 (1) 273-286; DOI: https://doi.org/10.1104/pp.113.225755

      The ordering and organization of the plasma membrane of tobacco suspension cells as well as membrane fluidity, is modified during the early steps of the signaling cascade induced by an elicitor of defense reactions.

  4. Gershenzon, Jonathan

    1. Peroxisomal ATP-Binding Cassette Transporter COMATOSE and the Multifunctional Protein ABNORMAL INFLORESCENCE MERISTEM Are Required for the Production of Benzoylated Metabolites in Arabidopsis Seeds
      You have accessRestricted Access
      Peroxisomal ATP-Binding Cassette Transporter COMATOSE and the Multifunctional Protein ABNORMAL INFLORESCENCE MERISTEM Are Required for the Production of Benzoylated Metabolites in Arabidopsis Seeds
      John D. Bussell, Michael Reichelt, Andrew A.G. Wiszniewski, Jonathan Gershenzon, Steven M. Smith
      Plant Physiol. Jan 2014, 164 (1) 48-54; DOI: https://doi.org/10.1104/pp.113.229807

      A peroxisomal substrate transporter and β-oxidation provide benzoic acid for the accumulation of benzoylated secondary metabolites during Arabidopsis seed development.

  5. Giehl, Ricardo F.H.

    1. Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Open Access
      Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Nicole B. Schmid, Ricardo F.H. Giehl, Stefanie Döll, Hans-Peter Mock, Nadine Strehmel, Dierk Scheel, Xiaole Kong, Robert C. Hider, Nicolaus von Wirén
      Plant Physiol. Jan 2014, 164 (1) 160-172; DOI: https://doi.org/10.1104/pp.113.228544

      The release of F coumarins is a component of the reduction-based iron acquisition machinery that helps plants to mobilize iron under alkaline conditions.

  6. Giovannoni, James J.

    1. Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Open Access
      Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Sebastian Klie, Sonia Osorio, Takayuki Tohge, María F. Drincovich, Aaron Fait, James J. Giovannoni, Alisdair R. Fernie, Zoran Nikoloski
      Plant Physiol. Jan 2014, 164 (1) 55-68; DOI: https://doi.org/10.1104/pp.113.226142

      STATIS analysis of metabolic profiles discerns conserved metabolic processes during development and ripening across fruits.

  7. Gómez-Cadenas, Aurelio

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

    2. Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      You have accessRestricted Access
      Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      Ana Rodríguez, Takehiko Shimada, Magdalena Cervera, Berta Alquézar, José Gadea, Aurelio Gómez-Cadenas, Carlos José De Ollas, María Jesús Rodrigo, Lorenzo Zacarías, Leandro Peña
      Plant Physiol. Jan 2014, 164 (1) 321-339; DOI: https://doi.org/10.1104/pp.113.224279

      Down-regulation of a d-limonene synthase gene in orange fruit triggers defense cascades linked to isoprenoid metabolism and resistance to necrotroph pathogens.

  8. Gonzales-Vigil, Eliana

    1. Determination of Residues Responsible for Substrate and Product Specificity of <em>Solanum habrochaites</em> Short-Chain cis-Prenyltransferases
      Open Access
      Determination of Residues Responsible for Substrate and Product Specificity of Solanum habrochaites Short-Chain cis-Prenyltransferases
      Jin-Ho Kang, Eliana Gonzales-Vigil, Yuki Matsuba, Eran Pichersky, Cornelius S. Barry
      Plant Physiol. Jan 2014, 164 (1) 80-91; DOI: https://doi.org/10.1104/pp.113.230466

      The relative positions of aromatic amino acids and adjacent residues within domain II of short-chain cis-prenyltransferases contributes to the evolution of volatile terpene biosynthesis in Solanum species trichomes.

  9. Graner, Andreas

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  10. Grbić, Miodrag

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  11. Grbić, Vojislava

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  12. Gresset, Sebastian

    1. Stable Carbon Isotope Discrimination Is under Genetic Control in the C<sub>4</sub> Species Maize with Several Genomic Regions Influencing Trait Expression
      You have accessRestricted Access
      Stable Carbon Isotope Discrimination Is under Genetic Control in the C4 Species Maize with Several Genomic Regions Influencing Trait Expression
      Sebastian Gresset, Peter Westermeier, Svenja Rademacher, Milena Ouzunova, Thomas Presterl, Peter Westhoff, Chris-Carolin Schön
      Plant Physiol. Jan 2014, 164 (1) 131-143; DOI: https://doi.org/10.1104/pp.113.224816

      Multiplatform-based phenotyping and high-density genotyping uncovers multiple genomic regions controlling stable carbon isotope discrimination in a maize introgression library.

  13. Griffiths, Howard

    1. The Operation of Two Decarboxylases, Transamination, and Partitioning of C<sub>4</sub> Metabolic Processes between Mesophyll and Bundle Sheath Cells Allows Light Capture To Be Balanced for the Maize C<sub>4</sub> Pathway
      You have accessRestricted Access
      The Operation of Two Decarboxylases, Transamination, and Partitioning of C4 Metabolic Processes between Mesophyll and Bundle Sheath Cells Allows Light Capture To Be Balanced for the Maize C4 Pathway
      Chandra Bellasio, Howard Griffiths
      Plant Physiol. Jan 2014, 164 (1) 466-480; DOI: https://doi.org/10.1104/pp.113.228221

      Light quality was used to manipulate ATP supply and demand between C4 pathway mesophyll and bundle sheath, and the results are consistent with a metabolic model that explains the requirement for two decarboxylases and the partitioning of metabolic activities in maize.

  14. Grosjean, Kevin

    1. Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      You have accessRestricted Access
      Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      Patricia Gerbeau-Pissot, Christophe Der, Dominique Thomas, Iulia-Andra Anca, Kevin Grosjean, Yann Roche, Jean-Marie Perrier-Cornet, Sébastien Mongrand, Françoise Simon-Plas
      Plant Physiol. Jan 2014, 164 (1) 273-286; DOI: https://doi.org/10.1104/pp.113.225755

      The ordering and organization of the plasma membrane of tobacco suspension cells as well as membrane fluidity, is modified during the early steps of the signaling cascade induced by an elicitor of defense reactions.

  15. Gundlach, Heidrun

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

H

  1. Hake, Sarah

    1. Unequal Redundancy in Maize <em>knotted1 homeobox</em> Genes
      Open Access
      Unequal Redundancy in Maize knotted1 homeobox Genes
      Nathalie Bolduc, Randall G. Tyers, Michael Freeling, Sarah Hake
      Plant Physiol. Jan 2014, 164 (1) 229-238; DOI: https://doi.org/10.1104/pp.113.228791

      A homeobox gene plays a critical, dosage-dependent role in shoot apical meristem establishment and maintenance, stem elongation, and inflorescence development that is only uncovered in a knotted1 mutant background.

  2. Hara-Nishimura, Ikuko

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  3. Hatanaka, Tomoko

    1. Unusual Small Subunit That Is Not Expressed in Photosynthetic Cells Alters the Catalytic Properties of Rubisco in Rice
      Open Access
      Unusual Small Subunit That Is Not Expressed in Photosynthetic Cells Alters the Catalytic Properties of Rubisco in Rice
      Koichi Morita, Tomoko Hatanaka, Shuji Misoo, Hiroshi Fukayama
      Plant Physiol. Jan 2014, 164 (1) 69-79; DOI: https://doi.org/10.1104/pp.113.228015

      Rice utilizes different type of Rubisco small subunit in nonphotosynthetic cells.

  4. Hatcher, Tommy

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  5. He, Hua

    1. Molecular Mechanism of microRNA396 Mediating Pistil Development in Arabidopsis
      You have accessRestricted Access
      Molecular Mechanism of microRNA396 Mediating Pistil Development in Arabidopsis
      Gang Liang, Hua He, Yang Li, Fang Wang, Diqiu Yu
      Plant Physiol. Jan 2014, 164 (1) 249-258; DOI: https://doi.org/10.1104/pp.113.225144

      miR396 affects pistil development by suppressing its target genes and cotranscription complex.

  6. Headland, Lauren R.

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  7. Hedley, Pete E.

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  8. Heese, Antje

    1. Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      Open Access
      Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      John M. Smith, Daniel J. Salamango, Michelle E. Leslie, Carina A. Collins, Antje Heese
      Plant Physiol. Jan 2014, 164 (1) 440-454; DOI: https://doi.org/10.1104/pp.113.229179

      Ligand-induced degradation of endogenous flagellin receptor desensitizes cells to its stimulus, likely to remove ligand-bound receptors from the site of perception, and subsequent de novo receptor synthesis resensitizes cells for a new round of stimulus perception.

  9. Hider, Robert C.

    1. Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Open Access
      Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Nicole B. Schmid, Ricardo F.H. Giehl, Stefanie Döll, Hans-Peter Mock, Nadine Strehmel, Dierk Scheel, Xiaole Kong, Robert C. Hider, Nicolaus von Wirén
      Plant Physiol. Jan 2014, 164 (1) 160-172; DOI: https://doi.org/10.1104/pp.113.228544

      The release of F coumarins is a component of the reduction-based iron acquisition machinery that helps plants to mobilize iron under alkaline conditions.

  10. Himmelbach, Axel

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  11. Holding, David R.

    1. Deletion Mutagenesis Identifies a Haploinsufficient Role for γ-Zein in <em>opaque2</em> Endosperm Modification
      Open Access
      Deletion Mutagenesis Identifies a Haploinsufficient Role for γ-Zein in opaque2 Endosperm Modification
      Lingling Yuan, Yongchao Dou, Shahryar F. Kianian, Chi Zhang, David R. Holding
      Plant Physiol. Jan 2014, 164 (1) 119-130; DOI: https://doi.org/10.1104/pp.113.230961

      A haploinsufficient role is identified for γ-zein in maize mutant endosperm modification.

  12. Hong, Yiguo

    1. Virus-Based MicroRNA Silencing in Plants
      Open Access
      Virus-Based MicroRNA Silencing in Plants
      Aihua Sha, Jinping Zhao, Kangquan Yin, Yang Tang, Yan Wang, Xiang Wei, Yiguo Hong, Yule Liu
      Plant Physiol. Jan 2014, 164 (1) 36-47; DOI: https://doi.org/10.1104/pp.113.231100

      Virus-based microRNA silencing can be used for functional analysis of endogenous microRNAs in plants.

  13. Huang, Zhigang

    1. Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Open Access
      Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Qingyun Bu, Tianxiao Lv, Hui Shen, Phi Luong, Jimmy Wang, Zhenyu Wang, Zhigang Huang, Langtao Xiao, Cawas Engineer, Tae Houn Kim, Julian I. Schroeder, Enamul Huq
      Plant Physiol. Jan 2014, 164 (1) 424-439; DOI: https://doi.org/10.1104/pp.113.226837

      An F-box protein regulates drought and osmotic stress responses in a strigolactone-independent manner in Arabidopsis.

  14. Huq, Enamul

    1. Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Open Access
      Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Qingyun Bu, Tianxiao Lv, Hui Shen, Phi Luong, Jimmy Wang, Zhenyu Wang, Zhigang Huang, Langtao Xiao, Cawas Engineer, Tae Houn Kim, Julian I. Schroeder, Enamul Huq
      Plant Physiol. Jan 2014, 164 (1) 424-439; DOI: https://doi.org/10.1104/pp.113.226837

      An F-box protein regulates drought and osmotic stress responses in a strigolactone-independent manner in Arabidopsis.

I

  1. Innes, Roger W.

    1. Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on <em>S</em>-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Open Access
      Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on S-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Dong Qi, Ullrich Dubiella, Sang Hee Kim, D. Isaiah Sloss, Robert H. Dowen, Jack E. Dixon, Roger W. Innes
      Plant Physiol. Jan 2014, 164 (1) 340-351; DOI: https://doi.org/10.1104/pp.113.227686

      A nucleotide-binding protein distinguishes among closely related protein kinases based on plasma membrane localization and an exposed loop in the C-terminal third of the kinase domain.

J

  1. Jordan, Siân R.D.

    1. Do Plants Contain G Protein-Coupled Receptors?
      Open Access
      Do Plants Contain G Protein-Coupled Receptors?
      Bruck Taddese, Graham J.G. Upton, Gregory R. Bailey, Siân R.D. Jordan, Nuradin Y. Abdulla, Philip J. Reeves, Christopher A. Reynolds
      Plant Physiol. Jan 2014, 164 (1) 287-307; DOI: https://doi.org/10.1104/pp.113.228874

      GCR1 shares the fold and key functional motifs of class A, class B, and class E G protein-coupled receptors.

  2. Juenger, Thomas E.

    1. Genome-Wide Association Mapping Combined with Reverse Genetics Identifies New Effectors of Low Water Potential-Induced Proline Accumulation in Arabidopsis
      Open Access
      Genome-Wide Association Mapping Combined with Reverse Genetics Identifies New Effectors of Low Water Potential-Induced Proline Accumulation in Arabidopsis
      Paul E. Verslues, Jesse R. Lasky, Thomas E. Juenger, Tzu-Wen Liu, M. Nagaraj Kumar
      Plant Physiol. Jan 2014, 164 (1) 144-159; DOI: https://doi.org/10.1104/pp.113.224014

      Genome-wide association analysis and spatial patterning of single-nucleotide polymorphism data guide reverse genetics to identify new genes linking stress-induced proline accumulation with cellular redox and energy status.

K

  1. Kang, Jin-Ho

    1. Determination of Residues Responsible for Substrate and Product Specificity of <em>Solanum habrochaites</em> Short-Chain cis-Prenyltransferases
      Open Access
      Determination of Residues Responsible for Substrate and Product Specificity of Solanum habrochaites Short-Chain cis-Prenyltransferases
      Jin-Ho Kang, Eliana Gonzales-Vigil, Yuki Matsuba, Eran Pichersky, Cornelius S. Barry
      Plant Physiol. Jan 2014, 164 (1) 80-91; DOI: https://doi.org/10.1104/pp.113.230466

      The relative positions of aromatic amino acids and adjacent residues within domain II of short-chain cis-prenyltransferases contributes to the evolution of volatile terpene biosynthesis in Solanum species trichomes.

  2. Kappel, Christian

    1. The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Open Access
      The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Philippe Nicolas, David Lecourieux, Christian Kappel, Stéphanie Cluzet, Grant Cramer, Serge Delrot, Fatma Lecourieux
      Plant Physiol. Jan 2014, 164 (1) 365-383; DOI: https://doi.org/10.1104/pp.113.231977

      A basic leucine zipper family transcription factor is an important transcriptional regulator of abscisic acid-dependent grape berry ripening.

  3. Kars, Ilona

    1. Fungal Endopolygalacturonases Are Recognized as Microbe-Associated Molecular Patterns by the Arabidopsis Receptor-Like Protein RESPONSIVENESS TO BOTRYTIS POLYGALACTURONASES1
      You have accessRestricted Access
      Fungal Endopolygalacturonases Are Recognized as Microbe-Associated Molecular Patterns by the Arabidopsis Receptor-Like Protein RESPONSIVENESS TO BOTRYTIS POLYGALACTURONASES1
      Lisha Zhang, Ilona Kars, Bert Essenstam, Thomas W.H. Liebrand, Lia Wagemakers, Joyce Elberse, Panagiota Tagkalaki, Devlin Tjoitang, Guido van den Ackerveken, Jan A.L. van Kan
      Plant Physiol. Jan 2014, 164 (1) 352-364; DOI: https://doi.org/10.1104/pp.113.230698

      Fungal pectin-degrading enzymes act as microbe-associated molecular patterns that are recognized by a pattern recognition receptor from Arabidopsis.

  4. Kianian, Shahryar F.

    1. Deletion Mutagenesis Identifies a Haploinsufficient Role for γ-Zein in <em>opaque2</em> Endosperm Modification
      Open Access
      Deletion Mutagenesis Identifies a Haploinsufficient Role for γ-Zein in opaque2 Endosperm Modification
      Lingling Yuan, Yongchao Dou, Shahryar F. Kianian, Chi Zhang, David R. Holding
      Plant Physiol. Jan 2014, 164 (1) 119-130; DOI: https://doi.org/10.1104/pp.113.230961

      A haploinsufficient role is identified for γ-zein in maize mutant endosperm modification.

  5. Kim, Sang Hee

    1. Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on <em>S</em>-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Open Access
      Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on S-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Dong Qi, Ullrich Dubiella, Sang Hee Kim, D. Isaiah Sloss, Robert H. Dowen, Jack E. Dixon, Roger W. Innes
      Plant Physiol. Jan 2014, 164 (1) 340-351; DOI: https://doi.org/10.1104/pp.113.227686

      A nucleotide-binding protein distinguishes among closely related protein kinases based on plasma membrane localization and an exposed loop in the C-terminal third of the kinase domain.

  6. Kim, Tae Houn

    1. Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Open Access
      Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Qingyun Bu, Tianxiao Lv, Hui Shen, Phi Luong, Jimmy Wang, Zhenyu Wang, Zhigang Huang, Langtao Xiao, Cawas Engineer, Tae Houn Kim, Julian I. Schroeder, Enamul Huq
      Plant Physiol. Jan 2014, 164 (1) 424-439; DOI: https://doi.org/10.1104/pp.113.226837

      An F-box protein regulates drought and osmotic stress responses in a strigolactone-independent manner in Arabidopsis.

  7. Klie, Sebastian

    1. Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Open Access
      Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Sebastian Klie, Sonia Osorio, Takayuki Tohge, María F. Drincovich, Aaron Fait, James J. Giovannoni, Alisdair R. Fernie, Zoran Nikoloski
      Plant Physiol. Jan 2014, 164 (1) 55-68; DOI: https://doi.org/10.1104/pp.113.226142

      STATIS analysis of metabolic profiles discerns conserved metabolic processes during development and ripening across fruits.

  8. Koester, Beke

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  9. Kong, Xiaole

    1. Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Open Access
      Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Nicole B. Schmid, Ricardo F.H. Giehl, Stefanie Döll, Hans-Peter Mock, Nadine Strehmel, Dierk Scheel, Xiaole Kong, Robert C. Hider, Nicolaus von Wirén
      Plant Physiol. Jan 2014, 164 (1) 160-172; DOI: https://doi.org/10.1104/pp.113.228544

      The release of F coumarins is a component of the reduction-based iron acquisition machinery that helps plants to mobilize iron under alkaline conditions.

  10. Korkuć, Paula

    1. Characterization and Identification of cis-Regulatory Elements in Arabidopsis Based on Single-Nucleotide Polymorphism Information
      Open Access
      Characterization and Identification of cis-Regulatory Elements in Arabidopsis Based on Single-Nucleotide Polymorphism Information
      Paula Korkuć, Jos H.M. Schippers, Dirk Walther
      Plant Physiol. Jan 2014, 164 (1) 181-200; DOI: https://doi.org/10.1104/pp.113.229716

      Information on genomic variation provided by novel sequencing technologies offers new and powerful approaches to identify regulatory elements and characterize gene promoter sequences.

  11. Korol, Abraham

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  12. Krishna, Priti

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  13. Kumar, M. Nagaraj

    1. Genome-Wide Association Mapping Combined with Reverse Genetics Identifies New Effectors of Low Water Potential-Induced Proline Accumulation in Arabidopsis
      Open Access
      Genome-Wide Association Mapping Combined with Reverse Genetics Identifies New Effectors of Low Water Potential-Induced Proline Accumulation in Arabidopsis
      Paul E. Verslues, Jesse R. Lasky, Thomas E. Juenger, Tzu-Wen Liu, M. Nagaraj Kumar
      Plant Physiol. Jan 2014, 164 (1) 144-159; DOI: https://doi.org/10.1104/pp.113.224014

      Genome-wide association analysis and spatial patterning of single-nucleotide polymorphism data guide reverse genetics to identify new genes linking stress-induced proline accumulation with cellular redox and energy status.

  14. Kumar, Ravi

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

L

  1. Langridge, Peter

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  2. Lasky, Jesse R.

    1. Genome-Wide Association Mapping Combined with Reverse Genetics Identifies New Effectors of Low Water Potential-Induced Proline Accumulation in Arabidopsis
      Open Access
      Genome-Wide Association Mapping Combined with Reverse Genetics Identifies New Effectors of Low Water Potential-Induced Proline Accumulation in Arabidopsis
      Paul E. Verslues, Jesse R. Lasky, Thomas E. Juenger, Tzu-Wen Liu, M. Nagaraj Kumar
      Plant Physiol. Jan 2014, 164 (1) 144-159; DOI: https://doi.org/10.1104/pp.113.224014

      Genome-wide association analysis and spatial patterning of single-nucleotide polymorphism data guide reverse genetics to identify new genes linking stress-induced proline accumulation with cellular redox and energy status.

  3. Lecourieux, David

    1. The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Open Access
      The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Philippe Nicolas, David Lecourieux, Christian Kappel, Stéphanie Cluzet, Grant Cramer, Serge Delrot, Fatma Lecourieux
      Plant Physiol. Jan 2014, 164 (1) 365-383; DOI: https://doi.org/10.1104/pp.113.231977

      A basic leucine zipper family transcription factor is an important transcriptional regulator of abscisic acid-dependent grape berry ripening.

  4. Lecourieux, Fatma

    1. The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Open Access
      The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Philippe Nicolas, David Lecourieux, Christian Kappel, Stéphanie Cluzet, Grant Cramer, Serge Delrot, Fatma Lecourieux
      Plant Physiol. Jan 2014, 164 (1) 365-383; DOI: https://doi.org/10.1104/pp.113.231977

      A basic leucine zipper family transcription factor is an important transcriptional regulator of abscisic acid-dependent grape berry ripening.

  5. Leitner, Daniel

    1. Recovering Root System Traits Using Image Analysis Exemplified by Two-Dimensional Neutron Radiography Images of Lupine
      Open Access
      Recovering Root System Traits Using Image Analysis Exemplified by Two-Dimensional Neutron Radiography Images of Lupine
      Daniel Leitner, Bernd Felderer, Peter Vontobel, Andrea Schnepf
      Plant Physiol. Jan 2014, 164 (1) 24-35; DOI: https://doi.org/10.1104/pp.113.227892

      Image-based parameterization of root architectural models is advanced by a new approach for the analysis of image sequences of plant root systems.

  6. Lejay, Laurence V.

    1. Glucose Elevates NITRATE TRANSPORTER2.1 Protein Levels and Nitrate Transport Activity Independently of Its HEXOKINASE1-Mediated Stimulation of <em>NITRATE TRANSPORTER2.1</em> Expression
      Open Access
      Glucose Elevates NITRATE TRANSPORTER2.1 Protein Levels and Nitrate Transport Activity Independently of Its HEXOKINASE1-Mediated Stimulation of NITRATE TRANSPORTER2.1 Expression
      Femke de Jong, Kate Thodey, Laurence V. Lejay, Michael W. Bevan
      Plant Physiol. Jan 2014, 164 (1) 308-320; DOI: https://doi.org/10.1104/pp.113.230599

      Independent mechanisms link photosynthate availability with nitrate uptake and assimilation into amino acids.

  7. Leslie, Michelle E.

    1. Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      Open Access
      Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      John M. Smith, Daniel J. Salamango, Michelle E. Leslie, Carina A. Collins, Antje Heese
      Plant Physiol. Jan 2014, 164 (1) 440-454; DOI: https://doi.org/10.1104/pp.113.229179

      Ligand-induced degradation of endogenous flagellin receptor desensitizes cells to its stimulus, likely to remove ligand-bound receptors from the site of perception, and subsequent de novo receptor synthesis resensitizes cells for a new round of stimulus perception.

  8. Li, Lin

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  9. Li, Yang

    1. Molecular Mechanism of microRNA396 Mediating Pistil Development in Arabidopsis
      You have accessRestricted Access
      Molecular Mechanism of microRNA396 Mediating Pistil Development in Arabidopsis
      Gang Liang, Hua He, Yang Li, Fang Wang, Diqiu Yu
      Plant Physiol. Jan 2014, 164 (1) 249-258; DOI: https://doi.org/10.1104/pp.113.225144

      miR396 affects pistil development by suppressing its target genes and cotranscription complex.

  10. Liang, Gang

    1. Molecular Mechanism of microRNA396 Mediating Pistil Development in Arabidopsis
      You have accessRestricted Access
      Molecular Mechanism of microRNA396 Mediating Pistil Development in Arabidopsis
      Gang Liang, Hua He, Yang Li, Fang Wang, Diqiu Yu
      Plant Physiol. Jan 2014, 164 (1) 249-258; DOI: https://doi.org/10.1104/pp.113.225144

      miR396 affects pistil development by suppressing its target genes and cotranscription complex.

  11. Liebrand, Thomas W.H.

    1. Fungal Endopolygalacturonases Are Recognized as Microbe-Associated Molecular Patterns by the Arabidopsis Receptor-Like Protein RESPONSIVENESS TO BOTRYTIS POLYGALACTURONASES1
      You have accessRestricted Access
      Fungal Endopolygalacturonases Are Recognized as Microbe-Associated Molecular Patterns by the Arabidopsis Receptor-Like Protein RESPONSIVENESS TO BOTRYTIS POLYGALACTURONASES1
      Lisha Zhang, Ilona Kars, Bert Essenstam, Thomas W.H. Liebrand, Lia Wagemakers, Joyce Elberse, Panagiota Tagkalaki, Devlin Tjoitang, Guido van den Ackerveken, Jan A.L. van Kan
      Plant Physiol. Jan 2014, 164 (1) 352-364; DOI: https://doi.org/10.1104/pp.113.230698

      Fungal pectin-degrading enzymes act as microbe-associated molecular patterns that are recognized by a pattern recognition receptor from Arabidopsis.

  12. Liese, Rebecca

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  13. Lin, Chentao

    1. RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      You have accessRestricted Access
      RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      Rikard Fristedt, Lars B. Scharff, Cornelia A. Clarke, Qin Wang, Chentao Lin, Sabeeha S. Merchant, Ralph Bock
      Plant Physiol. Jan 2014, 164 (1) 201-215; DOI: https://doi.org/10.1104/pp.113.228338

      A plant homolog of a bacterial ribosome biogenesis factor functions in chloroplasts, associates with thylakoid membranes, and is involved in maturation of ribosomal RNA.

  14. Lingner, Annika

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  15. Liu, Tzu-Wen

    1. Genome-Wide Association Mapping Combined with Reverse Genetics Identifies New Effectors of Low Water Potential-Induced Proline Accumulation in Arabidopsis
      Open Access
      Genome-Wide Association Mapping Combined with Reverse Genetics Identifies New Effectors of Low Water Potential-Induced Proline Accumulation in Arabidopsis
      Paul E. Verslues, Jesse R. Lasky, Thomas E. Juenger, Tzu-Wen Liu, M. Nagaraj Kumar
      Plant Physiol. Jan 2014, 164 (1) 144-159; DOI: https://doi.org/10.1104/pp.113.224014

      Genome-wide association analysis and spatial patterning of single-nucleotide polymorphism data guide reverse genetics to identify new genes linking stress-induced proline accumulation with cellular redox and energy status.

  16. Liu, Yule

    1. Virus-Based MicroRNA Silencing in Plants
      Open Access
      Virus-Based MicroRNA Silencing in Plants
      Aihua Sha, Jinping Zhao, Kangquan Yin, Yang Tang, Yan Wang, Xiang Wei, Yiguo Hong, Yule Liu
      Plant Physiol. Jan 2014, 164 (1) 36-47; DOI: https://doi.org/10.1104/pp.113.231100

      Virus-based microRNA silencing can be used for functional analysis of endogenous microRNAs in plants.

  17. Luong, Phi

    1. Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Open Access
      Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Qingyun Bu, Tianxiao Lv, Hui Shen, Phi Luong, Jimmy Wang, Zhenyu Wang, Zhigang Huang, Langtao Xiao, Cawas Engineer, Tae Houn Kim, Julian I. Schroeder, Enamul Huq
      Plant Physiol. Jan 2014, 164 (1) 424-439; DOI: https://doi.org/10.1104/pp.113.226837

      An F-box protein regulates drought and osmotic stress responses in a strigolactone-independent manner in Arabidopsis.

  18. Lv, Tianxiao

    1. Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Open Access
      Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Qingyun Bu, Tianxiao Lv, Hui Shen, Phi Luong, Jimmy Wang, Zhenyu Wang, Zhigang Huang, Langtao Xiao, Cawas Engineer, Tae Houn Kim, Julian I. Schroeder, Enamul Huq
      Plant Physiol. Jan 2014, 164 (1) 424-439; DOI: https://doi.org/10.1104/pp.113.226837

      An F-box protein regulates drought and osmotic stress responses in a strigolactone-independent manner in Arabidopsis.

M

  1. Madueño, Francisco

    1. Regulation of Compound Leaf Development by <em>PHANTASTICA</em> in <em>Medicago truncatula</em>
      Open Access
      Regulation of Compound Leaf Development by PHANTASTICA in Medicago truncatula
      Liangfa Ge, Jianling Peng, Ana Berbel, Francisco Madueño, Rujin Chen
      Plant Physiol. Jan 2014, 164 (1) 216-228; DOI: https://doi.org/10.1104/pp.113.229914

      A MYB domain protein maintains petiole identity by repressing expression of a motor organ identity gene and promoting petiole and stipule development in Medicago truncatula.

  2. Maloof, Julin N.

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  3. Martinez, Ciera C.

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  4. Mascher, Martin

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  5. Matsuba, Yuki

    1. Determination of Residues Responsible for Substrate and Product Specificity of <em>Solanum habrochaites</em> Short-Chain cis-Prenyltransferases
      Open Access
      Determination of Residues Responsible for Substrate and Product Specificity of Solanum habrochaites Short-Chain cis-Prenyltransferases
      Jin-Ho Kang, Eliana Gonzales-Vigil, Yuki Matsuba, Eran Pichersky, Cornelius S. Barry
      Plant Physiol. Jan 2014, 164 (1) 80-91; DOI: https://doi.org/10.1104/pp.113.230466

      The relative positions of aromatic amino acids and adjacent residues within domain II of short-chain cis-prenyltransferases contributes to the evolution of volatile terpene biosynthesis in Solanum species trichomes.

  6. Mayer, Klaus F.X.

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  7. Merchant, Sabeeha S.

    1. RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      You have accessRestricted Access
      RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      Rikard Fristedt, Lars B. Scharff, Cornelia A. Clarke, Qin Wang, Chentao Lin, Sabeeha S. Merchant, Ralph Bock
      Plant Physiol. Jan 2014, 164 (1) 201-215; DOI: https://doi.org/10.1104/pp.113.228338

      A plant homolog of a bacterial ribosome biogenesis factor functions in chloroplasts, associates with thylakoid membranes, and is involved in maturation of ribosomal RNA.

  8. Minorsky, Peter V.

    1. You have accessRestricted Access
      On the Inside
      Peter V. Minorsky
      Plant Physiol. Jan 2014, 164 (1) 10-11; DOI: https://doi.org/10.1104/pp.113.900478
  9. Misoo, Shuji

    1. Unusual Small Subunit That Is Not Expressed in Photosynthetic Cells Alters the Catalytic Properties of Rubisco in Rice
      Open Access
      Unusual Small Subunit That Is Not Expressed in Photosynthetic Cells Alters the Catalytic Properties of Rubisco in Rice
      Koichi Morita, Tomoko Hatanaka, Shuji Misoo, Hiroshi Fukayama
      Plant Physiol. Jan 2014, 164 (1) 69-79; DOI: https://doi.org/10.1104/pp.113.228015

      Rice utilizes different type of Rubisco small subunit in nonphotosynthetic cells.

  10. Mock, Hans-Peter

    1. Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Open Access
      Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Nicole B. Schmid, Ricardo F.H. Giehl, Stefanie Döll, Hans-Peter Mock, Nadine Strehmel, Dierk Scheel, Xiaole Kong, Robert C. Hider, Nicolaus von Wirén
      Plant Physiol. Jan 2014, 164 (1) 160-172; DOI: https://doi.org/10.1104/pp.113.228544

      The release of F coumarins is a component of the reduction-based iron acquisition machinery that helps plants to mobilize iron under alkaline conditions.

  11. Mongrand, Sébastien

    1. Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      You have accessRestricted Access
      Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      Patricia Gerbeau-Pissot, Christophe Der, Dominique Thomas, Iulia-Andra Anca, Kevin Grosjean, Yann Roche, Jean-Marie Perrier-Cornet, Sébastien Mongrand, Françoise Simon-Plas
      Plant Physiol. Jan 2014, 164 (1) 273-286; DOI: https://doi.org/10.1104/pp.113.225755

      The ordering and organization of the plasma membrane of tobacco suspension cells as well as membrane fluidity, is modified during the early steps of the signaling cascade induced by an elicitor of defense reactions.

  12. Mori, Masashi

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  13. Morita, Koichi

    1. Unusual Small Subunit That Is Not Expressed in Photosynthetic Cells Alters the Catalytic Properties of Rubisco in Rice
      Open Access
      Unusual Small Subunit That Is Not Expressed in Photosynthetic Cells Alters the Catalytic Properties of Rubisco in Rice
      Koichi Morita, Tomoko Hatanaka, Shuji Misoo, Hiroshi Fukayama
      Plant Physiol. Jan 2014, 164 (1) 69-79; DOI: https://doi.org/10.1104/pp.113.228015

      Rice utilizes different type of Rubisco small subunit in nonphotosynthetic cells.

  14. Muehlbauer, Gary J.

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  15. Munro, Peter R.T.

    1. Estimates of Leaf Vein Density Are Scale Dependent
      Open Access
      Estimates of Leaf Vein Density Are Scale Dependent
      Charles A. Price, Peter R.T. Munro, Joshua S. Weitz
      Plant Physiol. Jan 2014, 164 (1) 173-180; DOI: https://doi.org/10.1104/pp.113.224451

      Best practice minimizes complications arising in estimates of leaf vein density that depend strongly and systematically on the scale of inquiry and the tradeoff between field of view, magnification, lattice effects, and vein hierarchical effects.

  16. Myles, Sean

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

N

  1. Navarro, Marie

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  2. Naylor, Daniel T.

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  3. Nicolas, Philippe

    1. The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Open Access
      The Basic Leucine Zipper Transcription Factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 Is an Important Transcriptional Regulator of Abscisic Acid-Dependent Grape Berry Ripening Processes
      Philippe Nicolas, David Lecourieux, Christian Kappel, Stéphanie Cluzet, Grant Cramer, Serge Delrot, Fatma Lecourieux
      Plant Physiol. Jan 2014, 164 (1) 365-383; DOI: https://doi.org/10.1104/pp.113.231977

      A basic leucine zipper family transcription factor is an important transcriptional regulator of abscisic acid-dependent grape berry ripening.

  4. Nikoloski, Zoran

    1. Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Open Access
      Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Sebastian Klie, Sonia Osorio, Takayuki Tohge, María F. Drincovich, Aaron Fait, James J. Giovannoni, Alisdair R. Fernie, Zoran Nikoloski
      Plant Physiol. Jan 2014, 164 (1) 55-68; DOI: https://doi.org/10.1104/pp.113.226142

      STATIS analysis of metabolic profiles discerns conserved metabolic processes during development and ripening across fruits.

  5. Nussbaumer, Thomas

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

O

  1. Okazaki, Yozo

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  2. Osborne, Edward J.

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  3. Osorio, Sonia

    1. Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Open Access
      Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species
      Sebastian Klie, Sonia Osorio, Takayuki Tohge, María F. Drincovich, Aaron Fait, James J. Giovannoni, Alisdair R. Fernie, Zoran Nikoloski
      Plant Physiol. Jan 2014, 164 (1) 55-68; DOI: https://doi.org/10.1104/pp.113.226142

      STATIS analysis of metabolic profiles discerns conserved metabolic processes during development and ripening across fruits.

  4. Ouzunova, Milena

    1. Stable Carbon Isotope Discrimination Is under Genetic Control in the C<sub>4</sub> Species Maize with Several Genomic Regions Influencing Trait Expression
      You have accessRestricted Access
      Stable Carbon Isotope Discrimination Is under Genetic Control in the C4 Species Maize with Several Genomic Regions Influencing Trait Expression
      Sebastian Gresset, Peter Westermeier, Svenja Rademacher, Milena Ouzunova, Thomas Presterl, Peter Westhoff, Chris-Carolin Schön
      Plant Physiol. Jan 2014, 164 (1) 131-143; DOI: https://doi.org/10.1104/pp.113.224816

      Multiplatform-based phenotyping and high-density genotyping uncovers multiple genomic regions controlling stable carbon isotope discrimination in a maize introgression library.

P

  1. Peña, Leandro

    1. Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      You have accessRestricted Access
      Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      Ana Rodríguez, Takehiko Shimada, Magdalena Cervera, Berta Alquézar, José Gadea, Aurelio Gómez-Cadenas, Carlos José De Ollas, María Jesús Rodrigo, Lorenzo Zacarías, Leandro Peña
      Plant Physiol. Jan 2014, 164 (1) 321-339; DOI: https://doi.org/10.1104/pp.113.224279

      Down-regulation of a d-limonene synthase gene in orange fruit triggers defense cascades linked to isoprenoid metabolism and resistance to necrotroph pathogens.

  2. Peng, Jianling

    1. Regulation of Compound Leaf Development by <em>PHANTASTICA</em> in <em>Medicago truncatula</em>
      Open Access
      Regulation of Compound Leaf Development by PHANTASTICA in Medicago truncatula
      Liangfa Ge, Jianling Peng, Ana Berbel, Francisco Madueño, Rujin Chen
      Plant Physiol. Jan 2014, 164 (1) 216-228; DOI: https://doi.org/10.1104/pp.113.229914

      A MYB domain protein maintains petiole identity by repressing expression of a motor organ identity gene and promoting petiole and stipule development in Medicago truncatula.

  3. Perrier-Cornet, Jean-Marie

    1. Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      You have accessRestricted Access
      Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      Patricia Gerbeau-Pissot, Christophe Der, Dominique Thomas, Iulia-Andra Anca, Kevin Grosjean, Yann Roche, Jean-Marie Perrier-Cornet, Sébastien Mongrand, Françoise Simon-Plas
      Plant Physiol. Jan 2014, 164 (1) 273-286; DOI: https://doi.org/10.1104/pp.113.225755

      The ordering and organization of the plasma membrane of tobacco suspension cells as well as membrane fluidity, is modified during the early steps of the signaling cascade induced by an elicitor of defense reactions.

  4. Pfalz, Jeannette

    1. A Major Role for the Plastid-Encoded RNA Polymerase Complex in the Expression of Plastid Transfer RNAs
      Open Access
      A Major Role for the Plastid-Encoded RNA Polymerase Complex in the Expression of Plastid Transfer RNAs
      Rosalind Williams-Carrier, Reimo Zoschke, Susan Belcher, Jeannette Pfalz, Alice Barkan
      Plant Physiol. Jan 2014, 164 (1) 239-248; DOI: https://doi.org/10.1104/pp.113.228726

      Proteins that associate with the plastid-encoded RNA polymerase are required for robust expression of numerous plastid tRNAs.

  5. Pichersky, Eran

    1. Determination of Residues Responsible for Substrate and Product Specificity of <em>Solanum habrochaites</em> Short-Chain cis-Prenyltransferases
      Open Access
      Determination of Residues Responsible for Substrate and Product Specificity of Solanum habrochaites Short-Chain cis-Prenyltransferases
      Jin-Ho Kang, Eliana Gonzales-Vigil, Yuki Matsuba, Eran Pichersky, Cornelius S. Barry
      Plant Physiol. Jan 2014, 164 (1) 80-91; DOI: https://doi.org/10.1104/pp.113.230466

      The relative positions of aromatic amino acids and adjacent residues within domain II of short-chain cis-prenyltransferases contributes to the evolution of volatile terpene biosynthesis in Solanum species trichomes.

  6. Platzer, Matthias

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  7. Pommerenke, Claudia

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  8. Poursarebani, Naser

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  9. Prakash, Richa Rawat

    1. Coexpressing <em>Escherichia coli</em> Cyclopropane Synthase with <em>Sterculia foetida</em> Lysophosphatidic Acid Acyltransferase Enhances Cyclopropane Fatty Acid Accumulation
      Open Access
      Coexpressing Escherichia coli Cyclopropane Synthase with Sterculia foetida Lysophosphatidic Acid Acyltransferase Enhances Cyclopropane Fatty Acid Accumulation
      Xiao-Hong Yu, Richa Rawat Prakash, Marie Sweet, John Shanklin
      Plant Physiol. Jan 2014, 164 (1) 455-465; DOI: https://doi.org/10.1104/pp.113.230953

      Heterologous expression in plant seeds of two lipid-modifying enzymes enables a synthetic cycle that enriches for the accumulation of cyclopropane fatty acids at both sn-1 and sn-2 positions of phosphatidylcholine.

  10. Presterl, Thomas

    1. Stable Carbon Isotope Discrimination Is under Genetic Control in the C<sub>4</sub> Species Maize with Several Genomic Regions Influencing Trait Expression
      You have accessRestricted Access
      Stable Carbon Isotope Discrimination Is under Genetic Control in the C4 Species Maize with Several Genomic Regions Influencing Trait Expression
      Sebastian Gresset, Peter Westermeier, Svenja Rademacher, Milena Ouzunova, Thomas Presterl, Peter Westhoff, Chris-Carolin Schön
      Plant Physiol. Jan 2014, 164 (1) 131-143; DOI: https://doi.org/10.1104/pp.113.224816

      Multiplatform-based phenotyping and high-density genotyping uncovers multiple genomic regions controlling stable carbon isotope discrimination in a maize introgression library.

  11. Price, Charles A.

    1. Estimates of Leaf Vein Density Are Scale Dependent
      Open Access
      Estimates of Leaf Vein Density Are Scale Dependent
      Charles A. Price, Peter R.T. Munro, Joshua S. Weitz
      Plant Physiol. Jan 2014, 164 (1) 173-180; DOI: https://doi.org/10.1104/pp.113.224451

      Best practice minimizes complications arising in estimates of leaf vein density that depend strongly and systematically on the scale of inquiry and the tradeoff between field of view, magnification, lattice effects, and vein hierarchical effects.

  12. Prins, Bernard

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

Q

  1. Qi, Dong

    1. Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on <em>S</em>-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Open Access
      Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on S-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Dong Qi, Ullrich Dubiella, Sang Hee Kim, D. Isaiah Sloss, Robert H. Dowen, Jack E. Dixon, Roger W. Innes
      Plant Physiol. Jan 2014, 164 (1) 340-351; DOI: https://doi.org/10.1104/pp.113.227686

      A nucleotide-binding protein distinguishes among closely related protein kinases based on plasma membrane localization and an exposed loop in the C-terminal third of the kinase domain.

R

  1. Rademacher, Svenja

    1. Stable Carbon Isotope Discrimination Is under Genetic Control in the C<sub>4</sub> Species Maize with Several Genomic Regions Influencing Trait Expression
      You have accessRestricted Access
      Stable Carbon Isotope Discrimination Is under Genetic Control in the C4 Species Maize with Several Genomic Regions Influencing Trait Expression
      Sebastian Gresset, Peter Westermeier, Svenja Rademacher, Milena Ouzunova, Thomas Presterl, Peter Westhoff, Chris-Carolin Schön
      Plant Physiol. Jan 2014, 164 (1) 131-143; DOI: https://doi.org/10.1104/pp.113.224816

      Multiplatform-based phenotyping and high-density genotyping uncovers multiple genomic regions controlling stable carbon isotope discrimination in a maize introgression library.

  2. Ramakrishna, Wusirika

    1. Machine Learning Approaches Distinguish Multiple Stress Conditions using Stress-Responsive Genes and Identify Candidate Genes for Broad Resistance in Rice
      Open Access
      Machine Learning Approaches Distinguish Multiple Stress Conditions using Stress-Responsive Genes and Identify Candidate Genes for Broad Resistance in Rice
      Rafi Shaik, Wusirika Ramakrishna
      Plant Physiol. Jan 2014, 164 (1) 481-495; DOI: https://doi.org/10.1104/pp.113.225862

      Meta-analysis of differentially expressed rice genes under different stress conditions accurately classified them using machine learning approaches and identified genes likely to confer broad resistance to multiple abiotic and biotic stresses.

  3. Ranjan, Aashish

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  4. Raymundo, Nataly

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  5. Reeves, Philip J.

    1. Do Plants Contain G Protein-Coupled Receptors?
      Open Access
      Do Plants Contain G Protein-Coupled Receptors?
      Bruck Taddese, Graham J.G. Upton, Gregory R. Bailey, Siân R.D. Jordan, Nuradin Y. Abdulla, Philip J. Reeves, Christopher A. Reynolds
      Plant Physiol. Jan 2014, 164 (1) 287-307; DOI: https://doi.org/10.1104/pp.113.228874

      GCR1 shares the fold and key functional motifs of class A, class B, and class E G protein-coupled receptors.

  6. Reichelt, Michael

    1. Peroxisomal ATP-Binding Cassette Transporter COMATOSE and the Multifunctional Protein ABNORMAL INFLORESCENCE MERISTEM Are Required for the Production of Benzoylated Metabolites in Arabidopsis Seeds
      You have accessRestricted Access
      Peroxisomal ATP-Binding Cassette Transporter COMATOSE and the Multifunctional Protein ABNORMAL INFLORESCENCE MERISTEM Are Required for the Production of Benzoylated Metabolites in Arabidopsis Seeds
      John D. Bussell, Michael Reichelt, Andrew A.G. Wiszniewski, Jonathan Gershenzon, Steven M. Smith
      Plant Physiol. Jan 2014, 164 (1) 48-54; DOI: https://doi.org/10.1104/pp.113.229807

      A peroxisomal substrate transporter and β-oxidation provide benzoic acid for the accumulation of benzoylated secondary metabolites during Arabidopsis seed development.

  7. Reynolds, Christopher A.

    1. Do Plants Contain G Protein-Coupled Receptors?
      Open Access
      Do Plants Contain G Protein-Coupled Receptors?
      Bruck Taddese, Graham J.G. Upton, Gregory R. Bailey, Siân R.D. Jordan, Nuradin Y. Abdulla, Philip J. Reeves, Christopher A. Reynolds
      Plant Physiol. Jan 2014, 164 (1) 287-307; DOI: https://doi.org/10.1104/pp.113.228874

      GCR1 shares the fold and key functional motifs of class A, class B, and class E G protein-coupled receptors.

  8. Rioja, Cristina

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  9. Roche, Yann

    1. Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      You have accessRestricted Access
      Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      Patricia Gerbeau-Pissot, Christophe Der, Dominique Thomas, Iulia-Andra Anca, Kevin Grosjean, Yann Roche, Jean-Marie Perrier-Cornet, Sébastien Mongrand, Françoise Simon-Plas
      Plant Physiol. Jan 2014, 164 (1) 273-286; DOI: https://doi.org/10.1104/pp.113.225755

      The ordering and organization of the plasma membrane of tobacco suspension cells as well as membrane fluidity, is modified during the early steps of the signaling cascade induced by an elicitor of defense reactions.

  10. Rodrigo, María Jesús

    1. Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      You have accessRestricted Access
      Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      Ana Rodríguez, Takehiko Shimada, Magdalena Cervera, Berta Alquézar, José Gadea, Aurelio Gómez-Cadenas, Carlos José De Ollas, María Jesús Rodrigo, Lorenzo Zacarías, Leandro Peña
      Plant Physiol. Jan 2014, 164 (1) 321-339; DOI: https://doi.org/10.1104/pp.113.224279

      Down-regulation of a d-limonene synthase gene in orange fruit triggers defense cascades linked to isoprenoid metabolism and resistance to necrotroph pathogens.

  11. Rodríguez, Ana

    1. Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      You have accessRestricted Access
      Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      Ana Rodríguez, Takehiko Shimada, Magdalena Cervera, Berta Alquézar, José Gadea, Aurelio Gómez-Cadenas, Carlos José De Ollas, María Jesús Rodrigo, Lorenzo Zacarías, Leandro Peña
      Plant Physiol. Jan 2014, 164 (1) 321-339; DOI: https://doi.org/10.1104/pp.113.224279

      Down-regulation of a d-limonene synthase gene in orange fruit triggers defense cascades linked to isoprenoid metabolism and resistance to necrotroph pathogens.

  12. Rubio-Somoza, Ignacio

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

S

  1. Saito, Kazuki

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  2. Salamango, Daniel J.

    1. Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      Open Access
      Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      John M. Smith, Daniel J. Salamango, Michelle E. Leslie, Carina A. Collins, Antje Heese
      Plant Physiol. Jan 2014, 164 (1) 440-454; DOI: https://doi.org/10.1104/pp.113.229179

      Ligand-induced degradation of endogenous flagellin receptor desensitizes cells to its stimulus, likely to remove ligand-bound receptors from the site of perception, and subsequent de novo receptor synthesis resensitizes cells for a new round of stimulus perception.

  3. Salinas-Riester, Gabriela

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  4. Santamaria, M. Estrella

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  5. Sasaki, Ryosuke

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  6. Scharff, Lars B.

    1. RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      You have accessRestricted Access
      RBF1, a Plant Homolog of the Bacterial Ribosome-Binding Factor RbfA, Acts in Processing of the Chloroplast 16S Ribosomal RNA
      Rikard Fristedt, Lars B. Scharff, Cornelia A. Clarke, Qin Wang, Chentao Lin, Sabeeha S. Merchant, Ralph Bock
      Plant Physiol. Jan 2014, 164 (1) 201-215; DOI: https://doi.org/10.1104/pp.113.228338

      A plant homolog of a bacterial ribosome biogenesis factor functions in chloroplasts, associates with thylakoid membranes, and is involved in maturation of ribosomal RNA.

  7. Scheel, Dierk

    1. Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Open Access
      Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Nicole B. Schmid, Ricardo F.H. Giehl, Stefanie Döll, Hans-Peter Mock, Nadine Strehmel, Dierk Scheel, Xiaole Kong, Robert C. Hider, Nicolaus von Wirén
      Plant Physiol. Jan 2014, 164 (1) 160-172; DOI: https://doi.org/10.1104/pp.113.228544

      The release of F coumarins is a component of the reduction-based iron acquisition machinery that helps plants to mobilize iron under alkaline conditions.

  8. Schippers, Jos H.M.

    1. Characterization and Identification of cis-Regulatory Elements in Arabidopsis Based on Single-Nucleotide Polymorphism Information
      Open Access
      Characterization and Identification of cis-Regulatory Elements in Arabidopsis Based on Single-Nucleotide Polymorphism Information
      Paula Korkuć, Jos H.M. Schippers, Dirk Walther
      Plant Physiol. Jan 2014, 164 (1) 181-200; DOI: https://doi.org/10.1104/pp.113.229716

      Information on genomic variation provided by novel sequencing technologies offers new and powerful approaches to identify regulatory elements and characterize gene promoter sequences.

  9. Schmid, Markus

    1. Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Open Access
      Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite
      Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gómez-Cadenas, Yves Van de Peer, Miodrag Grbić, Richard M. Clark, Thomas Van Leeuwen, Vojislava Grbić
      Plant Physiol. Jan 2014, 164 (1) 384-399; DOI: https://doi.org/10.1104/pp.113.231555

      Analysis of genome-wide Arabidopsis responses to spider mite identifies the secondary metabolites that limit the mite's ability to use Arabidopsis as a host.

  10. Schmid, Nicole B.

    1. Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Open Access
      Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Nicole B. Schmid, Ricardo F.H. Giehl, Stefanie Döll, Hans-Peter Mock, Nadine Strehmel, Dierk Scheel, Xiaole Kong, Robert C. Hider, Nicolaus von Wirén
      Plant Physiol. Jan 2014, 164 (1) 160-172; DOI: https://doi.org/10.1104/pp.113.228544

      The release of F coumarins is a component of the reduction-based iron acquisition machinery that helps plants to mobilize iron under alkaline conditions.

  11. Schmutzer, Thomas

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  12. Schnepf, Andrea

    1. Recovering Root System Traits Using Image Analysis Exemplified by Two-Dimensional Neutron Radiography Images of Lupine
      Open Access
      Recovering Root System Traits Using Image Analysis Exemplified by Two-Dimensional Neutron Radiography Images of Lupine
      Daniel Leitner, Bernd Felderer, Peter Vontobel, Andrea Schnepf
      Plant Physiol. Jan 2014, 164 (1) 24-35; DOI: https://doi.org/10.1104/pp.113.227892

      Image-based parameterization of root architectural models is advanced by a new approach for the analysis of image sequences of plant root systems.

  13. Scholz, Uwe

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  14. Schön, Chris-Carolin

    1. Stable Carbon Isotope Discrimination Is under Genetic Control in the C<sub>4</sub> Species Maize with Several Genomic Regions Influencing Trait Expression
      You have accessRestricted Access
      Stable Carbon Isotope Discrimination Is under Genetic Control in the C4 Species Maize with Several Genomic Regions Influencing Trait Expression
      Sebastian Gresset, Peter Westermeier, Svenja Rademacher, Milena Ouzunova, Thomas Presterl, Peter Westhoff, Chris-Carolin Schön
      Plant Physiol. Jan 2014, 164 (1) 131-143; DOI: https://doi.org/10.1104/pp.113.224816

      Multiplatform-based phenotyping and high-density genotyping uncovers multiple genomic regions controlling stable carbon isotope discrimination in a maize introgression library.

  15. Schroeder, Julian I.

    1. Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Open Access
      Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Qingyun Bu, Tianxiao Lv, Hui Shen, Phi Luong, Jimmy Wang, Zhenyu Wang, Zhigang Huang, Langtao Xiao, Cawas Engineer, Tae Houn Kim, Julian I. Schroeder, Enamul Huq
      Plant Physiol. Jan 2014, 164 (1) 424-439; DOI: https://doi.org/10.1104/pp.113.226837

      An F-box protein regulates drought and osmotic stress responses in a strigolactone-independent manner in Arabidopsis.

  16. Schulte, Daniela

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  17. Schulze, Joachim

    1. An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of <em>Medicago truncatula</em>
      You have accessRestricted Access
      An RNA Sequencing Transcriptome Analysis Reveals Novel Insights into Molecular Aspects of the Nitrate Impact on the Nodule Activity of Medicago truncatula
      Ricardo Cabeza, Beke Koester, Rebecca Liese, Annika Lingner, Vanessa Baumgarten, Jan Dirks, Gabriela Salinas-Riester, Claudia Pommerenke, Klaus Dittert, Joachim Schulze
      Plant Physiol. Jan 2014, 164 (1) 400-411; DOI: https://doi.org/10.1104/pp.113.228312

      A nitrate-induced decline in nitrogenase activity in Medicago truncatula nodules is connected with a strong down-regulation of genes for nodule-specific cysteine-rich peptides and leghemoglobins, changes in inner cell iron allocation, and a decline in nodule respiration efficiency.

  18. Sha, Aihua

    1. Virus-Based MicroRNA Silencing in Plants
      Open Access
      Virus-Based MicroRNA Silencing in Plants
      Aihua Sha, Jinping Zhao, Kangquan Yin, Yang Tang, Yan Wang, Xiang Wei, Yiguo Hong, Yule Liu
      Plant Physiol. Jan 2014, 164 (1) 36-47; DOI: https://doi.org/10.1104/pp.113.231100

      Virus-based microRNA silencing can be used for functional analysis of endogenous microRNAs in plants.

  19. Shaik, Rafi

    1. Machine Learning Approaches Distinguish Multiple Stress Conditions using Stress-Responsive Genes and Identify Candidate Genes for Broad Resistance in Rice
      Open Access
      Machine Learning Approaches Distinguish Multiple Stress Conditions using Stress-Responsive Genes and Identify Candidate Genes for Broad Resistance in Rice
      Rafi Shaik, Wusirika Ramakrishna
      Plant Physiol. Jan 2014, 164 (1) 481-495; DOI: https://doi.org/10.1104/pp.113.225862

      Meta-analysis of differentially expressed rice genes under different stress conditions accurately classified them using machine learning approaches and identified genes likely to confer broad resistance to multiple abiotic and biotic stresses.

  20. Shanklin, John

    1. Coexpressing <em>Escherichia coli</em> Cyclopropane Synthase with <em>Sterculia foetida</em> Lysophosphatidic Acid Acyltransferase Enhances Cyclopropane Fatty Acid Accumulation
      Open Access
      Coexpressing Escherichia coli Cyclopropane Synthase with Sterculia foetida Lysophosphatidic Acid Acyltransferase Enhances Cyclopropane Fatty Acid Accumulation
      Xiao-Hong Yu, Richa Rawat Prakash, Marie Sweet, John Shanklin
      Plant Physiol. Jan 2014, 164 (1) 455-465; DOI: https://doi.org/10.1104/pp.113.230953

      Heterologous expression in plant seeds of two lipid-modifying enzymes enables a synthetic cycle that enriches for the accumulation of cyclopropane fatty acids at both sn-1 and sn-2 positions of phosphatidylcholine.

  21. Shen, Hui

    1. Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Open Access
      Regulation of Drought Tolerance by the F-Box Protein MAX2 in Arabidopsis
      Qingyun Bu, Tianxiao Lv, Hui Shen, Phi Luong, Jimmy Wang, Zhenyu Wang, Zhigang Huang, Langtao Xiao, Cawas Engineer, Tae Houn Kim, Julian I. Schroeder, Enamul Huq
      Plant Physiol. Jan 2014, 164 (1) 424-439; DOI: https://doi.org/10.1104/pp.113.226837

      An F-box protein regulates drought and osmotic stress responses in a strigolactone-independent manner in Arabidopsis.

  22. Shimada, Takashi L.

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  23. Shimada, Takehiko

    1. Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      You have accessRestricted Access
      Terpene Down-Regulation Triggers Defense Responses in Transgenic Orange Leading to Resistance against Fungal Pathogens
      Ana Rodríguez, Takehiko Shimada, Magdalena Cervera, Berta Alquézar, José Gadea, Aurelio Gómez-Cadenas, Carlos José De Ollas, María Jesús Rodrigo, Lorenzo Zacarías, Leandro Peña
      Plant Physiol. Jan 2014, 164 (1) 321-339; DOI: https://doi.org/10.1104/pp.113.224279

      Down-regulation of a d-limonene synthase gene in orange fruit triggers defense cascades linked to isoprenoid metabolism and resistance to necrotroph pathogens.

  24. Shimada, Tomoo

    1. Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      You have accessRestricted Access
      Leaf Oil Body Functions as a Subcellular Factory for the Production of a Phytoalexin in Arabidopsis
      Takashi L. Shimada, Yoshitaka Takano, Tomoo Shimada, Masayuki Fujiwara, Yoichiro Fukao, Masashi Mori, Yozo Okazaki, Kazuki Saito, Ryosuke Sasaki, Koh Aoki, Ikuko Hara-Nishimura
      Plant Physiol. Jan 2014, 164 (1) 105-118; DOI: https://doi.org/10.1104/pp.113.230185

      Leaf oil bodies are the source of a novel phytoalexin produced in response to fungal infection and senescence.

  25. Simon-Plas, Françoise

    1. Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      You have accessRestricted Access
      Modification of Plasma Membrane Organization in Tobacco Cells Elicited by Cryptogein
      Patricia Gerbeau-Pissot, Christophe Der, Dominique Thomas, Iulia-Andra Anca, Kevin Grosjean, Yann Roche, Jean-Marie Perrier-Cornet, Sébastien Mongrand, Françoise Simon-Plas
      Plant Physiol. Jan 2014, 164 (1) 273-286; DOI: https://doi.org/10.1104/pp.113.225755

      The ordering and organization of the plasma membrane of tobacco suspension cells as well as membrane fluidity, is modified during the early steps of the signaling cascade induced by an elicitor of defense reactions.

  26. Sinha, Neelima R.

    1. A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Open Access
      A Modern Ampelography: A Genetic Basis for Leaf Shape and Venation Patterning in Grape
      Daniel H. Chitwood, Aashish Ranjan, Ciera C. Martinez, Lauren R. Headland, Thinh Thiem, Ravi Kumar, Michael F. Covington, Tommy Hatcher, Daniel T. Naylor, Sharon Zimmerman, Nora Downs, Nataly Raymundo, Edward S. Buckler, Julin N. Maloof, Mallikarjuna Aradhya, Bernard Prins, Lin Li, Sean Myles, Neelima R. Sinha
      Plant Physiol. Jan 2014, 164 (1) 259-272; DOI: https://doi.org/10.1104/pp.113.229708

      Statistical methods can globally describe the complex shapes of grape leaves, permitting the evaluation of not only the genetic basis of leaf shape but its correlation with traits of economic interest.

  27. Sloss, D. Isaiah

    1. Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on <em>S</em>-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Open Access
      Recognition of the Protein Kinase AVRPPHB SUSCEPTIBLE1 by the Disease Resistance Protein RESISTANCE TO PSEUDOMONAS SYRINGAE5 Is Dependent on S-Acylation and an Exposed Loop in AVRPPHB SUSCEPTIBLE1
      Dong Qi, Ullrich Dubiella, Sang Hee Kim, D. Isaiah Sloss, Robert H. Dowen, Jack E. Dixon, Roger W. Innes
      Plant Physiol. Jan 2014, 164 (1) 340-351; DOI: https://doi.org/10.1104/pp.113.227686

      A nucleotide-binding protein distinguishes among closely related protein kinases based on plasma membrane localization and an exposed loop in the C-terminal third of the kinase domain.

  28. Smith, John M.

    1. Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      Open Access
      Sensitivity to Flg22 Is Modulated by Ligand-Induced Degradation and de Novo Synthesis of the Endogenous Flagellin-Receptor FLAGELLIN-SENSING2
      John M. Smith, Daniel J. Salamango, Michelle E. Leslie, Carina A. Collins, Antje Heese
      Plant Physiol. Jan 2014, 164 (1) 440-454; DOI: https://doi.org/10.1104/pp.113.229179

      Ligand-induced degradation of endogenous flagellin receptor desensitizes cells to its stimulus, likely to remove ligand-bound receptors from the site of perception, and subsequent de novo receptor synthesis resensitizes cells for a new round of stimulus perception.

  29. Smith, Steven M.

    1. Peroxisomal ATP-Binding Cassette Transporter COMATOSE and the Multifunctional Protein ABNORMAL INFLORESCENCE MERISTEM Are Required for the Production of Benzoylated Metabolites in Arabidopsis Seeds
      You have accessRestricted Access
      Peroxisomal ATP-Binding Cassette Transporter COMATOSE and the Multifunctional Protein ABNORMAL INFLORESCENCE MERISTEM Are Required for the Production of Benzoylated Metabolites in Arabidopsis Seeds
      John D. Bussell, Michael Reichelt, Andrew A.G. Wiszniewski, Jonathan Gershenzon, Steven M. Smith
      Plant Physiol. Jan 2014, 164 (1) 48-54; DOI: https://doi.org/10.1104/pp.113.229807

      A peroxisomal substrate transporter and β-oxidation provide benzoic acid for the accumulation of benzoylated secondary metabolites during Arabidopsis seed development.

  30. Stein, Nils

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  31. Steuernagel, Burkhard

    1. A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Open Access
      A Sequence-Ready Physical Map of Barley Anchored Genetically by Two Million Single-Nucleotide Polymorphisms
      Ruvini Ariyadasa, Martin Mascher, Thomas Nussbaumer, Daniela Schulte, Zeev Frenkel, Naser Poursarebani, Ruonan Zhou, Burkhard Steuernagel, Heidrun Gundlach, Stefan Taudien, Marius Felder, Matthias Platzer, Axel Himmelbach, Thomas Schmutzer, Pete E. Hedley, Gary J. Muehlbauer, Uwe Scholz, Abraham Korol, Klaus F.X. Mayer, Robbie Waugh, Peter Langridge, Andreas Graner, Nils Stein
      Plant Physiol. Jan 2014, 164 (1) 412-423; DOI: https://doi.org/10.1104/pp.113.228213

      A genome-wide physical map of barley was constructed and anchored genetically by a novel method involving whole-genome resequencing of a mapping population.

  32. Strehmel, Nadine

    1. Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Open Access
      Feruloyl-CoA 6′-Hydroxylase1-Dependent Coumarins Mediate Iron Acquisition from Alkaline Substrates in Arabidopsis
      Nicole B. Schmid, Ricardo F.H. Giehl, Stefanie Döll, Hans-Peter Mock, Nadine Strehmel, Dierk Scheel, Xiaole Kong, Robert C. Hider, Nicolaus von Wirén
      Plant Physiol.