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Table of Contents

Plant Physiology: 167 (1)
Jan 2015

THANK YOU TO REVIEWERS

  • You have accessRestricted Access
    Acknowledgment of Plant Physiology Reviewers
    Plant Physiol. Jan 2015, 167 (1) 1-8; DOI: https://doi.org/10.1104/pp.114.900502

ON THE INSIDE

  • You have accessRestricted Access
    On the Inside
    Peter V. Minorsky
    Plant Physiol. Jan 2015, 167 (1) 9-10; DOI: https://doi.org/10.1104/pp.114.900501

BREAKTHROUGH TECHNOLOGIES

  • Efficient Generation of Marker-Free Transgenic Rice Plants Using an Improved Transposon-Mediated Transgene Reintegration Strategy
    You have accessRestricted Access
    Efficient Generation of Marker-Free Transgenic Rice Plants Using an Improved Transposon-Mediated Transgene Reintegration Strategy
    Xiaoqing Gao, Jie Zhou, Jun Li, Xiaowei Zou, Jianhua Zhao, Qingliang Li, Ran Xia, Ruifang Yang, Dekai Wang, Zhaoxue Zuo, Jumin Tu, Yuezhi Tao, Xiaoyun Chen, Qi Xie, Zengrong Zhu, Shaohong Qu
    Plant Physiol. Jan 2015, 167 (1) 11-24; DOI: https://doi.org/10.1104/pp.114.246173

    An improved transposon-mediated transgene reintegration system efficiently generates marker-free transgenic rice plants.

  • Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes
    Open Access
    Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes
    MeiYee Law, Kevin L. Childs, Michael S. Campbell, Joshua C. Stein, Andrew J. Olson, Carson Holt, Nicholas Panchy, Jikai Lei, Dian Jiao, Carson M. Andorf, Carolyn J. Lawrence, Doreen Ware, Shin-Han Shiu, Yanni Sun, Ning Jiang, Mark Yandell
    Plant Physiol. Jan 2015, 167 (1) 25-39; DOI: https://doi.org/10.1104/pp.114.245027

    Reannotation of the maize genome using MAKER-P results in many revised and new gene models.

SCIENTIFIC CORRESPONDENCE

  • Direct X-Ray Microtomography Observation Confirms the Induction of Embolism upon Xylem Cutting under Tension
    You have accessRestricted Access
    Direct X-Ray Microtomography Observation Confirms the Induction of Embolism upon Xylem Cutting under Tension
    José M. Torres-Ruiz, Steven Jansen, Brendan Choat, Andrew J. McElrone, Hervé Cochard, Timothy J. Brodribb, Eric Badel, Regis Burlett, Pauline S. Bouche, Craig R. Brodersen, Shan Li, Hugh Morris, Sylvain Delzon
    Plant Physiol. Jan 2015, 167 (1) 40-43; DOI: https://doi.org/10.1104/pp.114.249706

    Direct visualization shows enhanced embolism of xylem samples when they are collected under tension.

Articles

  • BIOCHEMISTRY AND METABOLISM

    • Transgenic Perturbation of the Decarboxylation Phase of Crassulacean Acid Metabolism Alters Physiology and Metabolism But Has Only a Small Effect on Growth
      Open Access
      Transgenic Perturbation of the Decarboxylation Phase of Crassulacean Acid Metabolism Alters Physiology and Metabolism But Has Only a Small Effect on Growth
      Louisa V. Dever, Susanna F. Boxall, Jana Kneřová, James Hartwell
      Plant Physiol. Jan 2015, 167 (1) 44-59; DOI: https://doi.org/10.1104/pp.114.251827

      Blocking malate decarboxylation in a Crassulacean acid metabolism species leads to loss of carbon dioxide fixation in the dark, but has minimal impact on growth.

    • Proteome Analysis of Cytoplasmatic and Plastidic <em>β</em>-Carotene Lipid Droplets in <em>Dunaliella bardawil</em>
      Open Access
      Proteome Analysis of Cytoplasmatic and Plastidic β-Carotene Lipid Droplets in Dunaliella bardawil
      Lital Davidi, Yishai Levin, Shifra Ben-Dor, Uri Pick
      Plant Physiol. Jan 2015, 167 (1) 60-79; DOI: https://doi.org/10.1104/pp.114.248450

      Proteome analysis of two types of lipid droplets in Dunaliella bardawil uncovers enzymes involved in β-carotene biosynthesis and lipid droplet biogenesis.

    • Wax Layers on <em>Cosmos bipinnatus</em> Petals Contribute Unequally to Total Petal Water Resistance
      Open Access
      Wax Layers on Cosmos bipinnatus Petals Contribute Unequally to Total Petal Water Resistance
      Christopher Buschhaus, Dana Hager, Reinhard Jetter
      Plant Physiol. Jan 2015, 167 (1) 80-88; DOI: https://doi.org/10.1104/pp.114.249235

      Cuticular waxes of petals are distinct from those of leaves and stems, and limit water loss from the flower surface as effectively as waxes from the fruits of many species, but less effectively than those of leaves.

    • The Last Step in Cocaine Biosynthesis Is Catalyzed by a BAHD Acyltransferase
      Open Access
      The Last Step in Cocaine Biosynthesis Is Catalyzed by a BAHD Acyltransferase
      Gregor Wolfgang Schmidt, Jan Jirschitzka, Tiffany Porta, Michael Reichelt, Katrin Luck, José Carlos Pardo Torre, Franziska Dolke, Emmanuel Varesio, Gérard Hopfgartner, Jonathan Gershenzon, John Charles D’Auria
      Plant Physiol. Jan 2015, 167 (1) 89-101; DOI: https://doi.org/10.1104/pp.114.248187

      The terminal step in cocaine biosynthesis is catalyzed by an acyltransferase that utilizes benzoyl-CoA and methylecgonine as substrates and is localized to the spongy mesophyll.

    • Consequences of a Deficit in Vitamin B<sub>6</sub> Biosynthesis de Novo for Hormone Homeostasis and Root Development in Arabidopsis
      Open Access
      Consequences of a Deficit in Vitamin B6 Biosynthesis de Novo for Hormone Homeostasis and Root Development in Arabidopsis
      Svetlana Boycheva, Ana Dominguez, Jakub Rolcik, Thomas Boller, Teresa B. Fitzpatrick
      Plant Physiol. Jan 2015, 167 (1) 102-117; DOI: https://doi.org/10.1104/pp.114.247767

      Deficits in de novo vitamin B6 biosynthesis impair hormone homeostasis and root development but are a consequence of differential regulation of the genes.

    • Membrane Glycerolipid Remodeling Triggered by Nitrogen and Phosphorus Starvation in <em>Phaeodactylum tricornutum</em>
      You have accessRestricted Access
      Membrane Glycerolipid Remodeling Triggered by Nitrogen and Phosphorus Starvation in Phaeodactylum tricornutum
      Heni Abida, Lina-Juana Dolch, Coline Meï, Valeria Villanova, Melissa Conte, Maryse A. Block, Giovanni Finazzi, Olivier Bastien, Leïla Tirichine, Chris Bowler, Fabrice Rébeillé, Dimitris Petroutsos, Juliette Jouhet, Eric Maréchal
      Plant Physiol. Jan 2015, 167 (1) 118-136; DOI: https://doi.org/10.1104/pp.114.252395

      Nitrogen and phosphorus limitations trigger distinct remodeling processes and adaptive responses at the level of membrane and storage glycerolipids in a marine model diatom.

  • CELL BIOLOGY

    • The Arabidopsis Vacuolar Sorting Receptor1 Is Required for Osmotic Stress-Induced Abscisic Acid Biosynthesis
      Open Access
      The Arabidopsis Vacuolar Sorting Receptor1 Is Required for Osmotic Stress-Induced Abscisic Acid Biosynthesis
      Zhen-Yu Wang, Chris Gehring, Jianhua Zhu, Feng-Min Li, Jian-Kang Zhu, Liming Xiong
      Plant Physiol. Jan 2015, 167 (1) 137-152; DOI: https://doi.org/10.1104/pp.114.249268

      A vacuolar receptor is required for osmotic stress regulation of abscisic acid biosynthesis by maintaining intracellular pH homeostasis.

    • Blocking Single-Stranded Transferred DNA Conversion to Double-Stranded Intermediates by Overexpression of Yeast DNA REPLICATION FACTOR A
      You have accessRestricted Access
      Blocking Single-Stranded Transferred DNA Conversion to Double-Stranded Intermediates by Overexpression of Yeast DNA REPLICATION FACTOR A
      Mery Dafny-Yelin, Avner Levy, Raz Dafny, Tzvi Tzfira
      Plant Physiol. Jan 2015, 167 (1) 153-163; DOI: https://doi.org/10.1104/pp.114.250639

      Double-stranded intermediates play a significant role in the process of Agrobacterium T-DNA integration into the host genome.

    • Two Cytoplasmic Effectors of <em>Phytophthora sojae</em> Regulate Plant Cell Death via Interactions with Plant Catalases
      You have accessRestricted Access
      Two Cytoplasmic Effectors of Phytophthora sojae Regulate Plant Cell Death via Interactions with Plant Catalases
      Meixiang Zhang, Qi Li, Tingli Liu, Li Liu, Danyu Shen, Ye Zhu, Peihan Liu, Jian-Min Zhou, Daolong Dou
      Plant Physiol. Jan 2015, 167 (1) 164-175; DOI: https://doi.org/10.1104/pp.114.252437

      Oomycete effectors hijack host catalases to regulate plant programmed cell death and H2O2 homeostasis.

  • ECOPHYSIOLOGY AND SUSTAINABILITY

    • Malate Synthesis and Secretion Mediated by a Manganese-Enhanced Malate Dehydrogenase Confers Superior Manganese Tolerance in <em>Stylosanthes guianensis</em>
      You have accessRestricted Access
      Malate Synthesis and Secretion Mediated by a Manganese-Enhanced Malate Dehydrogenase Confers Superior Manganese Tolerance in Stylosanthes guianensis
      Zhijian Chen, Lili Sun, Pandao Liu, Guodao Liu, Jiang Tian, Hong Liao
      Plant Physiol. Jan 2015, 167 (1) 176-188; DOI: https://doi.org/10.1104/pp.114.251017

      The superior manganese tolerance of a tropical legume is achieved by the coordination of internal and external manganese detoxification via enhanced malate synthesis.

  • GENES, DEVELOPMENT, AND EVOLUTION

    • <em>FRIZZY PANICLE</em> Drives Supernumerary Spikelets in Bread Wheat
      You have accessRestricted Access
      FRIZZY PANICLE Drives Supernumerary Spikelets in Bread Wheat
      Oxana Dobrovolskaya, Caroline Pont, Richard Sibout, Petr Martinek, Ekaterina Badaeva, Florent Murat, Audrey Chosson, Nobuyoshi Watanabe, Elisa Prat, Nadine Gautier, Véronique Gautier, Charles Poncet, Yuriy L. Orlov, Alexander A. Krasnikov, Hélène Bergès, Elena Salina, Lyudmila Laikova, Jerome Salse
      Plant Physiol. Jan 2015, 167 (1) 189-199; DOI: https://doi.org/10.1104/pp.114.250043

      Wheat transcription factors located on chromosome group 2 drive the yield-related production of supernumerary spikelets.

    • Promotion of Testa Rupture during Garden Cress Germination Involves Seed Compartment-Specific Expression and Activity of Pectin Methylesterases
      Open Access
      Promotion of Testa Rupture during Garden Cress Germination Involves Seed Compartment-Specific Expression and Activity of Pectin Methylesterases
      Claudia Scheler, Karin Weitbrecht, Simon P. Pearce, Anthony Hampstead, Annette Büttner-Mainik, Kieran J.D. Lee, Antje Voegele, Krystyna Oracz, Bas J.W. Dekkers, Xiaofeng Wang, Andrew T.A. Wood, Leónie Bentsink, John R. King, J. Paul Knox, Michael J. Holdsworth, Kerstin Müller, Gerhard Leubner-Metzger
      Plant Physiol. Jan 2015, 167 (1) 200-215; DOI: https://doi.org/10.1104/pp.114.247429

      Seed tissue-specific gene expression of pectin methylesterases mediates seed cell wall pectin alterations to control the seed coat permeability and germination.

  • MEMBRANES, TRANSPORT, AND BIOENERGETICS

    • Alternative Splicing-Mediated Targeting of the Arabidopsis GLUTAMATE RECEPTOR3.5 to Mitochondria Affects Organelle Morphology
      You have accessRestricted Access
      Alternative Splicing-Mediated Targeting of the Arabidopsis GLUTAMATE RECEPTOR3.5 to Mitochondria Affects Organelle Morphology
      Enrico Teardo, Luca Carraretto, Sara De Bortoli, Alex Costa, Smrutisanjita Behera, Richard Wagner, Fiorella Lo Schiavo, Elide Formentin, Ildiko Szabo
      Plant Physiol. Jan 2015, 167 (1) 216-227; DOI: https://doi.org/10.1104/pp.114.242602

      A unique mitochondrial ion channel affects organelle physiology and its lack is associated with senescence in the model plant Arabidopsis.

    • Decreasing Electron Flux through the Cytochrome and/or Alternative Respiratory Pathways Triggers Common and Distinct Cellular Responses Dependent on Growth Conditions
      Open Access
      Decreasing Electron Flux through the Cytochrome and/or Alternative Respiratory Pathways Triggers Common and Distinct Cellular Responses Dependent on Growth Conditions
      Kristina Kühn, Guangkun Yin, Owen Duncan, Simon R. Law, Szymon Kubiszewski-Jakubiak, Parwinder Kaur, Etienne Meyer, Yan Wang, Catherine Colas des Francs Small, Estelle Giraud, Reena Narsai, James Whelan
      Plant Physiol. Jan 2015, 167 (1) 228-250; DOI: https://doi.org/10.1104/pp.114.249946

      Diverse signaling pathways are activated by perturbation of mitochondrial function under different growth conditions.

  • SIGNALING AND RESPONSE

    • Involvement of the Electrophilic Isothiocyanate Sulforaphane in Arabidopsis Local Defense Responses
      You have accessRestricted Access
      Involvement of the Electrophilic Isothiocyanate Sulforaphane in Arabidopsis Local Defense Responses
      Mats X. Andersson, Anders K. Nilsson, Oskar N. Johansson, Gülin Boztaş, Lisa E. Adolfsson, Francesco Pinosa, Christel Garcia Petit, Henrik Aronsson, David Mackey, Mahmut Tör, Mats Hamberg, Mats Ellerström
      Plant Physiol. Jan 2015, 167 (1) 251-261; DOI: https://doi.org/10.1104/pp.114.251892

      The secondary metabolite sulforaphane is produced during the hypersensitive response and is involved in protection against infections.

    • In Planta Processing and Glycosylation of a Nematode CLAVATA3/ENDOSPERM SURROUNDING REGION-Like Effector and Its Interaction with a Host CLAVATA2-Like Receptor to Promote Parasitism
      Open Access
      In Planta Processing and Glycosylation of a Nematode CLAVATA3/ENDOSPERM SURROUNDING REGION-Like Effector and Its Interaction with a Host CLAVATA2-Like Receptor to Promote Parasitism
      Shiyan Chen, Ping Lang, Demosthenis Chronis, Sheng Zhang, Walter S. De Jong, Melissa G. Mitchum, Xiaohong Wang
      Plant Physiol. Jan 2015, 167 (1) 262-272; DOI: https://doi.org/10.1104/pp.114.251637

      A nematode effector peptide is modified and processed in planta and the resulting glycopeptide interacts with a plant membrane-associated receptor to facilitate parasite infection.

    • Iron-Binding E3 Ligase Mediates Iron Response in Plants by Targeting Basic Helix-Loop-Helix Transcription Factors
      Open Access
      Iron-Binding E3 Ligase Mediates Iron Response in Plants by Targeting Basic Helix-Loop-Helix Transcription Factors
      Devarshi Selote, Rozalynne Samira, Anna Matthiadis, Jeffrey W. Gillikin, Terri A. Long
      Plant Physiol. Jan 2015, 167 (1) 273-286; DOI: https://doi.org/10.1104/pp.114.250837

      An iron-binding protein causes degradation of proteins involved in the iron deficiency response.

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Plant Physiology: 167 (1)
Plant Physiology
Vol. 167, Issue 1
Jan 2015
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  • THANK YOU TO REVIEWERS
  • ON THE INSIDE
  • BREAKTHROUGH TECHNOLOGIES
  • SCIENTIFIC CORRESPONDENCE
  • Articles
    • BIOCHEMISTRY AND METABOLISM
    • CELL BIOLOGY
    • ECOPHYSIOLOGY AND SUSTAINABILITY
    • GENES, DEVELOPMENT, AND EVOLUTION
    • MEMBRANES, TRANSPORT, AND BIOENERGETICS
    • SIGNALING AND RESPONSE

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