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Open Access

Physiological Responses and Gene Co-Expression Network of Mycorrhizal Roots under K+ Deprivation

Kevin Garcia, Deborah Chasman, Sushmita Roy, Jean-Michel Ané
Kevin Garcia
Department of Bacteriology (K.G., J.-M.A.), Department of Computer Sciences (S.R.), and Department of Agronomy (J.-M.A.), University of Wisconsin, Madison, Wisconsin 53706;
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Deborah Chasman
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Sushmita Roy
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Jean-Michel Ané
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  • For correspondence: jeanmichel.ane@wisc.edu

Published March 2017. DOI: https://doi.org/10.1104/pp.16.01959

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Abstract

Arbuscular mycorrhizal (AM) associations enhance the phosphorous and nitrogen nutrition of host plants, but little is known about their role in potassium (K+) nutrition. Medicago truncatula plants were cocultured with the AM fungus Rhizophagus irregularis under high and low K+ regimes for 6 weeks. We determined how K+ deprivation affects plant development and mineral acquisition and how these negative effects are tempered by the AM colonization. The transcriptional response of AM roots under K+ deficiency was analyzed by whole-genome RNA sequencing. K+ deprivation decreased root biomass and external K+ uptake and modulated oxidative stress gene expression in M. truncatula roots. AM colonization induced specific transcriptional responses to K+ deprivation that seem to temper these negative effects. A gene network analysis revealed putative key regulators of these responses. This study confirmed that AM associations provide some tolerance to K+ deprivation to host plants, revealed that AM symbiosis modulates the expression of specific root genes to cope with this nutrient stress, and identified putative regulators participating in these tolerance mechanisms.

  • Glossary

    AM
    arbuscular mycorrhizal
    RNA-seq
    RNA sequencing
    NM
    nonmycorrhized
    ICP-OES
    inductively coupled plasma optical emission spectrometry
    ROS
    reactive oxygen species
    GO
    Gene Ontology
    DEG
    differentially expressed gene
    • Received December 22, 2016.
    • Accepted January 31, 2017.
    • Published February 3, 2017.

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    Physiological Responses and Gene Co-Expression Network of Mycorrhizal Roots under K+ Deprivation
    Kevin Garcia, Deborah Chasman, Sushmita Roy, Jean-Michel Ané
    Plant Physiology Mar 2017, 173 (3) 1811-1823; DOI: 10.1104/pp.16.01959

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    Physiological Responses and Gene Co-Expression Network of Mycorrhizal Roots under K+ Deprivation
    Kevin Garcia, Deborah Chasman, Sushmita Roy, Jean-Michel Ané
    Plant Physiology Mar 2017, 173 (3) 1811-1823; DOI: 10.1104/pp.16.01959
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    Plant Physiology: 173 (3)
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    Mar 2017
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