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Functional classification for "List1" (MIPS)


Terms from the Functional Classification (MIPS) exceeding a pvalue cutoff of 0.01

Functional term List frequency Background frequency of use (Genome) Corrected P-value of over-representation Genes annotated to the term
unannotated 9 out of 171 genes, 5.3% 1 out of 23473 genes, 0.0% 0 At3g10040, At1g33055, At1g69030, At3g12320, At2g23120, At2g31410, At5g66985, At5g65660, At2g41730
ribosome biogenesis 19 out of 171 genes, 11.1% 411 out of 23473 genes, 1.8% 3.55e-08 At3g48930, At3g09630, At5g60670, At1g41880, At3g05560, At3g04840, At5g61170, At2g32060, At1g03360, At4g31700, At3g07110, At4g29410, At3g47370, At3g49080, At5g08180, At3g16780, At1g06380, At4g34910, At3g44590
ribosomal proteins 17 out of 171 genes, 9.9% 368 out of 23473 genes, 1.6% 3.42e-07 At3g48930, At3g09630, At5g60670, At1g41880, At3g05560, At3g04840, At5g61170, At2g32060, At4g31700, At3g07110, At4g29410, At3g49080, At3g47370, At5g08180, At3g16780, At1g06380, At3g44590
translation 26 out of 171 genes, 15.2% 924 out of 23473 genes, 3.9% 6.57e-07 At3g48930, At5g60670, At3g05560, At4g20980, At3g04840, At5g61170, At2g32060, At3g47370, At3g51800, At3g49080, At5g08180, At2g24050, At3g55620, At3g16780, At1g06380, At3g09630, At1g41880, At4g10480, At4g31700, At3g07110, At4g29410, At3g15010, At3g18600, At3g13920, At3g44590, At4g34910
PROTEIN SYNTHESIS 32 out of 171 genes, 18.7% 1626 out of 23473 genes, 6.9% 4.28e-05 At3g48930, At5g60670, At3g05560, At4g20980, At5g67630, At3g04840, At5g61170, At2g32060, At1g03360, At1g04770, At4g34870, At3g47370, At3g51800, At3g49080, At5g08180, At2g24050, At5g06110, At3g16780, At3g55620, At1g06380, At3g09630, At1g41880, At4g10480, At4g31700, At3g07110, At4g29410, At4g04610, At3g15010, At3g18600, At3g13920, At4g34910, At3g44590
RNA binding 15 out of 171 genes, 8.8% 457 out of 23473 genes, 1.9% 0.00026 At3g48930, At3g47370, At3g49080, At5g60670, At3g04840, At5g61170, At2g32060, At5g08180, At2g24050, At1g03360, At3g18600, At3g07110, At4g29410, At3g16780, At4g34910
Last modified: Mon March 22, 2004.
Comments:
Rodrigo GutiƩrrez
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