FOCUS ISSUE ON CHLAMYDOMONAS:

EDITORIAL: STATE OF THE FIELD:

Steven G. Ball

Eukaryotic Microalgae Genomics. The Essence of Being a Plant
Plant Physiol. 2005 137: 397-398. [Full Text] [PDF]  

UPDATE ON THE CIRCADIAN CLOCK IN CHLAMYDOMONAS REINHARDTII:

Maria Mittag, Stefanie Kiaulehn, and Carl Hirschie Johnson

The Circadian Clock in Chlamydomonas reinhardtii. What Is It For? What Is It Similar To?
Plant Physiol. 2005 137: 399-409. [Full Text] [PDF]  

UPDATE ON GENOMIC STUDIES OF ALGAE:

Arthur R. Grossman

Paths toward Algal Genomics
Plant Physiol. 2005 137: 410-427. [Full Text] [PDF]  

UPDATE ON METAL TRANSPORTERS IN UNICELLULAR ALGAE:

Marc Hanikenne, Ute Krämer, Vincent Demoulin, and Denis Baurain

A Comparative Inventory of Metal Transporters in the Green Alga Chlamydomonas reinhardtii and the Red Alga Cyanidioschizon merolae
Plant Physiol. 2005 137: 428-446. [Full Text] [PDF] [Supplemental Data]  

UPDATE ON CHLAMYDOMONAS OXIDATIVE PHOSPHORYLATION PROTEOME:

Pierre Cardol, Diego González-Halphen, Adrian Reyes-Prieto, Denis Baurain, René F. Matagne, and Claire Remacle

The Mitochondrial Oxidative Phosphorylation Proteome of Chlamydomonas reinhardtii Deduced from the Genome Sequencing Project
Plant Physiol. 2005 137: 447-459. [Full Text] [PDF]  

GENOME ANALYSIS-CHLAMYDOMONAS:

Guillaume Barbier, Christine Oesterhelt, Matthew D. Larson, Robert G. Halgren, Curtis Wilkerson, R. Michael Garavito, Christoph Benning, and Andreas P.M. Weber

Comparative Genomics of Two Closely Related Unicellular Thermo-Acidophilic Red Algae, Galdieria sulphuraria and Cyanidioschyzon merolae, Reveals the Molecular Basis of the Metabolic Flexibility of Galdieria sulphuraria and Significant Differences in Carbohydrate Metabolism of Both Algae
Plant Physiol. 2005 137: 460-474. [Abstract] [Full Text] [PDF]  

Katerina Bisova, Dmitri M. Krylov, and James G. Umen

Genome-Wide Annotation and Expression Profiling of Cell Cycle Regulatory Genes in Chlamydomonas reinhardtii
Plant Physiol. 2005 137: 475-491. [Abstract] [Full Text] [PDF] [Supplemental Data]  

RESEARCH ARTICLES:

Giorgio Forti and Giovanni Caldiroli

State Transitions in Chlamydomonas reinhardtii. The Role of the Mehler Reaction in State 2-to-State 1 Transition
Plant Physiol. 2005 137: 492-499. First Published on December 10, 2004; 10.1104/pp.104.048256 [Abstract] [Full Text] [PDF]  

Anton Montsant, Kamel Jabbari, Uma Maheswari, and Chris Bowler

Comparative Genomics of the Pennate Diatom Phaeodactylum tricornutum
Plant Physiol. 2005 137: 500-513. First Published on January 21, 2005; 10.1104/pp.104.052829 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Stéphane D. Lemaire, Alberto Quesada, Faustino Merchan, Juan Manuel Corral, Maria Isabel Igeno, Eliane Keryer, Emmanuelle Issakidis-Bourguet, Masakazu Hirasawa, David B. Knaff, and Myroslawa Miginiac-Maslow

NADP-Malate Dehydrogenase from Unicellular Green Alga Chlamydomonas reinhardtii. A First Step toward Redox Regulation?
Plant Physiol. 2005 137: 514-521. First Published on December 3, 2004; 10.1104/pp.104.052670 [Abstract] [Full Text] [PDF]  

David González-Ballester, Amaury de Montaigu, José Javier Higuera, Aurora Galván, and Emilio Fernández

Functional Genomics of the Regulation of the Nitrate Assimilation Pathway in Chlamydomonas
Plant Physiol. 2005 137: 522-533. First Published on January 21, 2005; 10.1104/pp.104.050914 [Abstract] [Full Text] [PDF]  

Brian Erickson, David B. Stern, and David C. Higgs

Microarray Analysis Confirms the Specificity of a Chlamydomonas reinhardtii Chloroplast RNA Stability Mutant
Plant Physiol. 2005 137: 534-544. First Published on January 21, 2005; 10.1104/pp.104.053256 [Abstract] [Full Text] [PDF]  

Rachel M. Dent, Cat M. Haglund, Brian L. Chin, Marilyn C. Kobayashi, and Krishna K. Niyogi

Functional Genomics of Eukaryotic Photosynthesis Using Insertional Mutagenesis of Chlamydomonas reinhardtii
Plant Physiol. 2005 137: 545-556. First Published on January 14, 2005; 10.1104/pp.104.055244 [Abstract] [Full Text] [PDF]  

Linda A. Rymarquis, Jocelyn M. Handley, Mabel Thomas, and David B. Stern

Beyond Complementation. Map-Based Cloning in Chlamydomonas reinhardtii
Plant Physiol. 2005 137: 557-566. First Published on January 21, 2005; 10.1104/pp.104.054221 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Osami Misumi, Motomichi Matsuzaki, Hisayoshi Nozaki, Shin-ya Miyagishima, Toshiyuki Mori, Keiji Nishida, Fumi Yagisawa, Yamato Yoshida, Haruko Kuroiwa, and Tsuneyoshi Kuroiwa

Cyanidioschyzon merolae Genome. A Tool for Facilitating Comparable Studies on Organelle Biogenesis in Photosynthetic Eukaryotes
Plant Physiol. 2005 137: 567-585. First Published on January 28, 2005; 10.1104/pp.104.053991 [Abstract] [Full Text] [PDF] [Supplemental Data]  

REGULAR ISSUE:

ON THE INSIDE:

Peter V. Minorsky

On the Inside
Plant Physiol. 2005 137: 586-587. [Full Text] [PDF]  

SCIENTIFIC CORRESPONDENCE:

José L. Carrasco, Gema Ancillo, María José Castelló, and Pablo Vera

A Novel DNA-Binding Motif, Hallmark of a New Family of Plant Transcription Factors
Plant Physiol. 2005 137: 602-606. [Full Text] [PDF]  

MEETING REPORTS:

Christine Faulkner, Jeri Brandom, Andy Maule, and Karl Oparka

Plasmodesmata 2004. Surfing the Symplasm
Plant Physiol. 2005 137: 607-610. [Full Text] [PDF]  

GENOME ANALYSIS:

Joke Allemeersch, Steffen Durinck, Rudy Vanderhaeghen, Philippe Alard, Ruth Maes, Kurt Seeuws, Tom Bogaert, Kathleen Coddens, Kirsten Deschouwer, Paul Van Hummelen, Marnik Vuylsteke, Yves Moreau, Jeroen Kwekkeboom, André H.M. Wijfjes, Sean May, Jim Beynon, Pierre Hilson, and Martin T.R. Kuiper

Benchmarking the CATMA Microarray. A Novel Tool forArabidopsis Transcriptome Analysis
Plant Physiol. 2005 137: 588-601. [Abstract] [Full Text] [PDF] [Supplemental Data]  

BIOCHEMICAL PROCESSES AND MACROMOLECULAR STRUCTURES:

Adriano Nunes-Nesi, Fernando Carrari, Anna Lytovchenko, Anna M.O. Smith, Marcelo Ehlers Loureiro, R. George Ratcliffe, Lee J. Sweetlove, and Alisdair R. Fernie

Enhanced Photosynthetic Performance and Growth as a Consequence of Decreasing Mitochondrial Malate Dehydrogenase Activity in Transgenic Tomato Plants
Plant Physiol. 2005 137: 611-622. First Published on January 21, 2005; 10.1104/pp.104.055566 [Abstract] [Full Text] [PDF]  

Simon Ross, Carmela Giglione, Michèle Pierre, Christelle Espagne, and Thierry Meinnel

Functional and Developmental Impact of Cytosolic Protein N-Terminal Methionine Excision in Arabidopsis
Plant Physiol. 2005 137: 623-637. First Published on January 28, 2005; 10.1104/pp.104.056861 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Gabriel Guillet and Vincenzo De Luca

Wound-Inducible Biosynthesis of Phytoalexin Hydroxycinnamic Acid Amides of Tyramine in Tryptophan and Tyrosine Decarboxylase Transgenic Tobacco Lines
Plant Physiol. 2005 137: 692-699. First Published on January 21, 2005; 10.1104/pp.104.050294 [Abstract] [Full Text] [PDF]  

Thomas D. Sharkey, Sansun Yeh, Amy E. Wiberley, Tanya G. Falbel, Deming Gong, and Donna E. Fernandez

Evolution of the Isoprene Biosynthetic Pathway in Kudzu
Plant Physiol. 2005 137: 700-712. First Published on January 14, 2005; 10.1104/pp.104.054445 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Marion Kanwischer, Svetlana Porfirova, Eveline Bergmüller, and Peter Dörmann

Alterations in Tocopherol Cyclase Activity in Transgenic and Mutant Plants of Arabidopsis Affect Tocopherol Content, Tocopherol Composition, and Oxidative Stress
Plant Physiol. 2005 137: 713-723. First Published on January 21, 2005; 10.1104/pp.104.054908 [Abstract] [Full Text] [PDF]  

Sylvie Coursol, Hervé Le Stunff, Daniel V. Lynch, Simon Gilroy, Sarah M. Assmann, and Sarah Spiegel

Arabidopsis Sphingosine Kinase and the Effects of Phytosphingosine-1-Phosphate on Stomatal Aperture
Plant Physiol. 2005 137: 724-737. First Published on January 21, 2005; 10.1104/pp.104.055806 [Abstract] [Full Text] [PDF] [Supplemental Data]  

BIOENERGETICS AND PHOTOSYNTHESIS:

Oula Ghannoum, John R. Evans, Wah Soon Chow, T. John Andrews, Jann P. Conroy, and Susanne von Caemmerer

Faster Rubisco Is the Key to Superior Nitrogen-Use Efficiency in NADP-Malic Enzyme Relative to NAD-Malic Enzyme C₄ Grasses
Plant Physiol. 2005 137: 638-650. First Published on January 21, 2005; 10.1104/pp.104.054759 [Abstract] [Full Text] [PDF]  

Idan Cohen, Joel A. Knopf, Vered Irihimovitch, and Michal Shapira

A Proposed Mechanism for the Inhibitory Effects of Oxidative Stress on Rubisco Assembly and Its Subunit Expression
Plant Physiol. 2005 137: 738-746. First Published on January 28, 2005; 10.1104/pp.104.056341 [Abstract] [Full Text] [PDF]  

Susanne von Caemmerer, L. Hendrickson, V. Quinn, N. Vella, A.G. Millgate, and R.T. Furbank

Reductions of Rubisco Activase by Antisense RNA in the C₄ Plant Flaveria bidentis Reduces Rubisco Carbamylation and Leaf Photosynthesis
Plant Physiol. 2005 137: 747-755. First Published on January 21, 2005; 10.1104/pp.104.056077 [Abstract] [Full Text] [PDF]  

Sean E. Weise, Kirsten S. Kim, Robert P. Stewart, and Thomas D. Sharkey

-Maltose Is the Metabolically Active Anomer of Maltose during Transitory Starch Degradation
Plant Physiol. 2005 137: 756-761. First Published on January 21, 2005; 10.1104/pp.104.055996 [Abstract] [Full Text] [PDF] [Supplemental Data]  

DEVELOPMENT AND HORMONE ACTION:

Robert J. Meister, Harriette Oldenhof, John L. Bowman, and Charles S. Gasser

Multiple Protein Regions Contribute to Differential Activities of YABBY Proteins inReproductive Development
Plant Physiol. 2005 137: 651-662. First Published on January 21, 2005; 10.1104/pp.104.055368 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Xiangyang Hu, Steven J. Neill, Zhangcheng Tang, and Weiming Cai

Nitric Oxide Mediates Gravitropic Bending in Soybean Roots
Plant Physiol. 2005 137: 663-670. First Published on January 28, 2005; 10.1104/pp.104.054494 [Abstract] [Full Text] [PDF] [Supplemental Data]  

ENVIRONMENTAL STRESS AND ADAPTATION:

Dominique Loqué, Uwe Ludewig, Lixing Yuan, and Nicolaus von Wirén

Tonoplast Intrinsic Proteins AtTIP2;1 and AtTIP2;3 Facilitate NH₃ Transport into the Vacuole
Plant Physiol. 2005 137: 671-680. First Published on January 21, 2005; 10.1104/pp.104.051268 [Abstract] [Full Text] [PDF]  

José López-Bucio, Esmeralda Hernández-Abreu, Lenin Sánchez-Calderón, Anahí Pérez-Torres, Rebekah A. Rampey, Bonnie Bartel, and Luis Herrera-Estrella

An Auxin Transport Independent Pathway Is Involved in Phosphate Stress-Induced Root Architectural Alterations in Arabidopsis. Identification of BIG as a Mediator of Auxin in Pericycle Cell Activation
Plant Physiol. 2005 137: 681-691. First Published on January 28, 2005; 10.1104/pp.104.049577 [Abstract] [Full Text] [PDF]  

GENETICS, GENOMICS, AND MOLECULAR EVOLUTION:

Norma L. Houston, Chuanzhu Fan, Qiu-Yun Xiang, Jan-Michael Schulze, Rudolf Jung, and Rebecca S. Boston

Phylogenetic Analyses Identify 10 Classes of the Protein Disulfide Isomerase Family in Plants, Including Single-Domain Protein Disulfide Isomerase-Related Proteins
Plant Physiol. 2005 137: 762-778. First Published on January 28, 2005; 10.1104/pp.104.056507 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Evgeny V. Kuzmin, Donald N. Duvick, and Kathleen J. Newton

A Mitochondrial Mutator System in Maize
Plant Physiol. 2005 137: 779-789. First Published on January 28, 2005; 10.1104/pp.104.053611 [Abstract] [Full Text] [PDF] [Supplemental Data]  

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