ON THE INSIDE:

Peter V. Minorsky

On the Inside
Plant Physiol. 2009 149: 599-600. doi:10.1104/pp.104.900283 [Full Text] [PDF]  

UPDATES:

Amitabh Mohanty, Anding Luo, Stacy DeBlasio, Xingyuan Ling, Yan Yang, Dorothy E. Tuthill, Katherine E. Williams, Daniel Hill, Tara Zadrozny, Agnes Chan, Anne W. Sylvester, and David Jackson

Advancing Cell Biology and Functional Genomics in Maize Using Fluorescent Protein-Tagged Lines
Plant Physiol. 2009 149: 601-605. doi:10.1104/pp.108.130146 [Full Text] [PDF]  

Andrea Pitzschke and Heribert Hirt

Disentangling the Complexity of Mitogen-Activated Protein Kinases and Reactive Oxygen Species Signaling
Plant Physiol. 2009 149: 606-615. doi:10.1104/pp.108.131557 [Full Text] [PDF]  

BREAKTHROUGH TECHNOLOGIES:

Zhiyang Zhai, Thanwalee Sooksa-nguan, and Olena K. Vatamaniuk Establishing RNA Interference as a Reverse-Genetic Approach for Gene Functional Analysis in Protoplasts Plant Physiol. 2009 149: 642-652. First Published on November 12, 2008; doi:10.1104/pp.108.130260 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

GENOME ANALYSIS:

Brian R. Morton, Vaqaar-un-Nisa Dar, and Stephen I. Wright

Analysis of Site Frequency Spectra from Arabidopsis with Context-Dependent Corrections for Ancestral Misinference
Plant Physiol. 2009 149: 616-624. First Published on November 19, 2008; doi:10.1104/pp.108.127787 [Abstract] [Full Text] [PDF]  

Nicholas Siefers, Kristen K. Dang, Roderick W. Kumimoto, William Edwards Bynum, IV, Gregory Tayrose, and Ben F. Holt, III Tissue-Specific Expression Patterns of Arabidopsis NF-Y Transcription Factors Suggest Potential for Extensive Combinatorial Complexity Plant Physiol. 2009 149: 625-641. First Published on November 19, 2008; doi:10.1104/pp.108.130591 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

BIOCHEMICAL PROCESSES AND MACROMOLECULAR STRUCTURES:

Margaretha J. van der Merwe, Sonia Osorio, Thomas Moritz, Adriano Nunes-Nesi, and Alisdair R. Fernie Decreased Mitochondrial Activities of Malate Dehydrogenase and Fumarase in Tomato Lead to Altered Root Growth and Architecture via Diverse Mechanisms Plant Physiol. 2009 149: 653-669. First Published on November 21, 2008; doi:10.1104/pp.108.130518 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Laurent Brechenmacher, Joohyun Lee, Sherri Sachdev, Zhao Song, Tran Hong Nha Nguyen, Trupti Joshi, Nathan Oehrle, Marc Libault, Brian Mooney, Dong Xu, Bret Cooper, and Gary Stacey Establishment of a Protein Reference Map for Soybean Root Hair Cells Plant Physiol. 2009 149: 670-682. First Published on November 26, 2008; doi:10.1104/pp.108.131649 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Tomoyoshi Akashi, Kanako Sasaki, Toshio Aoki, Shin-ichi Ayabe, and Kazufumi Yazaki

Molecular Cloning and Characterization of a cDNA for Pterocarpan 4-Dimethylallyltransferase Catalyzing the Key Prenylation Step in the Biosynthesis of Glyceollin, a Soybean Phytoalexin
Plant Physiol. 2009 149: 683-693. First Published on December 17, 2008; doi:10.1104/pp.108.123679 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Ming-Der Huang, Fu-Jin Wei, Cheng-Cheih Wu, Yue-Ie Caroline Hsing, and Anthony H.C. Huang Analyses of Advanced Rice Anther Transcriptomes Reveal Global Tapetum Secretory Functions and Potential Proteins for Lipid Exine Formation Plant Physiol. 2009 149: 694-707. First Published on December 17, 2008; doi:10.1104/pp.108.131128 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Tsubasa Shoji, Koji Inai, Yoshiaki Yazaki, Yasutaka Sato, Hisabumi Takase, Nobukazu Shitan, Kazufumi Yazaki, Yumi Goto, Kiminori Toyooka, Ken Matsuoka, and Takashi Hashimoto

Multidrug and Toxic Compound Extrusion-Type Transporters Implicated in Vacuolar Sequestration of Nicotine in Tobacco Roots
Plant Physiol. 2009 149: 708-718. First Published on December 19, 2008; doi:10.1104/pp.108.132811 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Stefanie Endres and Raimund Tenhaken Myoinositol Oxygenase Controls the Level of Myoinositol in Arabidopsis, But Does Not Increase Ascorbic Acid Plant Physiol. 2009 149: 1042-1049. First Published on December 17, 2008; doi:10.1104/pp.108.130948 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

Olga Serra, Marçal Soler, Carolin Hohn, Vincent Sauveplane, Franck Pinot, Rochus Franke, Lukas Schreiber, Salomé Prat, Marisa Molinas, and Mercè Figueras CYP86A33-Targeted Gene Silencing in Potato Tuber Alters Suberin Composition, Distorts Suberin Lamellae, and Impairs the Periderm's Water Barrier Function Plant Physiol. 2009 149: 1050-1060. First Published on December 24, 2008; doi:10.1104/pp.108.127183 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

BIOENERGETICS AND PHOTOSYNTHESIS:

Shaobai Huang, Nicolas L. Taylor, Reena Narsai, Holger Eubel, James Whelan, and A. Harvey Millar Experimental Analysis of the Rice Mitochondrial Proteome, Its Biogenesis, and Heterogeneity Plant Physiol. 2009 149: 719-734. First Published on November 14, 2008; doi:10.1104/pp.108.131300 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Eva Fuhrmann, Sven Gathmann, Eva Rupprecht, Jochen Golecki, and Dirk Schneider

Thylakoid Membrane Reduction Affects the Photosystem Stoichiometry in the Cyanobacterium Synechocystis sp. PCC 6803
Plant Physiol. 2009 149: 735-744. First Published on December 24, 2008; doi:10.1104/pp.108.132373 [Abstract] [Full Text] [PDF]  

Matthew P. Johnson, María L. Pérez-Bueno, Ahmad Zia, Peter Horton, and Alexander V. Ruban

The Zeaxanthin-Independent and Zeaxanthin-Dependent qE Components of Nonphotochemical Quenching Involve Common Conformational Changes within the Photosystem II Antenna in Arabidopsis
Plant Physiol. 2009 149: 1061-1075. First Published on November 14, 2008; doi:10.1104/pp.108.129957 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Marika Dobáková, Roman Sobotka, Martin Tichy, and Josef Komenda Psb28 Protein Is Involved in the Biogenesis of the Photosystem II Inner Antenna CP47 (PsbB) in the Cyanobacterium Synechocystis sp. PCC 6803 Plant Physiol. 2009 149: 1076-1086. First Published on November 26, 2008; doi:10.1104/pp.108.130039 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Ana Zabalza, Joost T. van Dongen, Anja Froehlich, Sandra N. Oliver, Benjamin Faix, Kapuganti Jagadis Gupta, Elmar Schmälzlin, Maria Igal, Luis Orcaray, Mercedes Royuela, and Peter Geigenberger Regulation of Respiration and Fermentation to Control the Plant Internal Oxygen Concentration Plant Physiol. 2009 149: 1087-1098. First Published on December 19, 2008; doi:10.1104/pp.108.129288 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

Juliana Camacho-Pereira, Laudiene Evangelista Meyer, Lilia Bender Machado, Marcus Fernandes Oliveira, and Antonio Galina

Reactive Oxygen Species Production by Potato Tuber Mitochondria Is Modulated by Mitochondrially Bound Hexokinase Activity
Plant Physiol. 2009 149: 1099-1110. First Published on December 24, 2008; doi:10.1104/pp.108.129247 [Abstract] [Full Text] [PDF]  

CELL BIOLOGY AND SIGNAL TRANSDUCTION:

Jung-Il Cho, Nayeon Ryoo, Joon-Seob Eom, Dae-Woo Lee, Hyun-Bi Kim, Seok-Won Jeong, Youn-Hyung Lee, Yong-Kook Kwon, Man-Ho Cho, Seong Hee Bhoo, Tae-Ryong Hahn, Youn-Il Park, Ildoo Hwang, Jen Sheen, and Jong-Seong Jeon

Role of the Rice Hexokinases OsHXK5 and OsHXK6 as Glucose Sensors
Plant Physiol. 2009 149: 745-759. First Published on November 14, 2008; doi:10.1104/pp.108.131227 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Pei Xu, Yang Xiang, Huilan Zhu, Haibin Xu, Zhengzhi Zhang, Caiqin Zhang, Lixia Zhang, and Zhengqiang Ma Wheat Cryptochromes: Subcellular Localization and Involvement in Photomorphogenesis and Osmotic Stress Responses Plant Physiol. 2009 149: 760-774. First Published on December 3, 2008; doi:10.1104/pp.108.132217 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

Adriano Senatore, Christopher P. Trobacher, and John S. Greenwood Ricinosomes Predict Programmed Cell Death Leading to Anther Dehiscence in Tomato Plant Physiol. 2009 149: 775-790. First Published on December 19, 2008; doi:10.1104/pp.108.132720 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Christopher B. Lee, Sunran Kim, and Bruce McClure A Pollen Protein, NaPCCP, That Binds Pistil Arabinogalactan Proteins Also Binds Phosphatidylinositol 3-Phosphate and Associates with the Pollen Tube Endomembrane System Plant Physiol. 2009 149: 791-802. First Published on December 19, 2008; doi:10.1104/pp.108.127936 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Tong Chen, Xiaoqin Wu, Yanmei Chen, Xiaojuan Li, Mei Huang, Maozhong Zheng, Frantisek Baluska, Jozef Samaj, and Jinxing Lin

Combined Proteomic and Cytological Analysis of Ca²⁺-Calmodulin Regulation in Picea meyeri Pollen Tube Growth
Plant Physiol. 2009 149: 1111-1126. First Published on November 14, 2008; doi:10.1104/pp.108.127514 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Xiaohong Ma, Oded Shor, Sofia Diminshtein, Ling Yu, Yang Ju Im, Imara Perera, Aaron Lomax, Wendy F. Boss, and Nava Moran Phosphatidylinositol (4,5)Bisphosphate Inhibits K+-Efflux Channel Activity in NT1 Tobacco Cultured Cells Plant Physiol. 2009 149: 1127-1140. First Published on December 3, 2008; doi:10.1104/pp.108.129007 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

DEVELOPMENT AND HORMONE ACTION:

Simeon O. Kotchoni, Katherine E. Larrimore, Madhumati Mukherjee, Chase F. Kempinski, and Carina Barth Alterations in the Endogenous Ascorbic Acid Content Affect Flowering Time in Arabidopsis Plant Physiol. 2009 149: 803-815. First Published on November 21, 2008; doi:10.1104/pp.108.132324 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Kenichi Shibuya, Tetsuya Yamada, Tomoko Suzuki, Keiichi Shimizu, and Kazuo Ichimura InPSR26, a Putative Membrane Protein, Regulates Programmed Cell Death during Petal Senescence in Japanese Morning Glory Plant Physiol. 2009 149: 816-824. First Published on November 26, 2008; doi:10.1104/pp.108.127415 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Masanori Okamoto, Yoko Tanaka, Suzanne R. Abrams, Yuji Kamiya, Motoaki Seki, and Eiji Nambara High Humidity Induces Abscisic Acid 8'-Hydroxylase in Stomata and Vasculature to Regulate Local and Systemic Abscisic Acid Responses in Arabidopsis Plant Physiol. 2009 149: 825-834. First Published on November 26, 2008; doi:10.1104/pp.108.130823 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

Yutaka Miyazawa, Akiko Takahashi, Akie Kobayashi, Tomoko Kaneyasu, Nobuharu Fujii, and Hideyuki Takahashi GNOM-Mediated Vesicular Trafficking Plays an Essential Role in Hydrotropism of Arabidopsis Roots Plant Physiol. 2009 149: 835-840. First Published on December 3, 2008; doi:10.1104/pp.108.131003 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Rena Shimizu, Jiabing Ji, Eric Kelsey, Kazuhiro Ohtsu, Patrick S. Schnable, and Michael J. Scanlon Tissue Specificity and Evolution of Meristematic WOX3 Function Plant Physiol. 2009 149: 841-850. First Published on December 10, 2008; doi:10.1104/pp.108.130765 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Ajin Mandaokar and John Browse MYB108 Acts Together with MYB24 to Regulate Jasmonate-Mediated Stamen Maturation in Arabidopsis Plant Physiol. 2009 149: 851-862. First Published on December 17, 2008; doi:10.1104/pp.108.132597 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

David C. Nelson, Julie-Anne Riseborough, Gavin R. Flematti, Jason Stevens, Emilio L. Ghisalberti, Kingsley W. Dixon, and Steven M. Smith Karrikins Discovered in Smoke Trigger Arabidopsis Seed Germination by a Mechanism Requiring Gibberellic Acid Synthesis and Light Plant Physiol. 2009 149: 863-873. First Published on December 12, 2008; doi:10.1104/pp.108.131516 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Zachary Larson-Rabin, Ziyu Li, Patrick H. Masson, and Christopher D. Day FZR2/CCS52A1 Expression Is a Determinant of Endoreduplication and Cell Expansion in Arabidopsis Plant Physiol. 2009 149: 874-884. First Published on December 12, 2008; doi:10.1104/pp.108.132449 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Shinya Wada, Hiroyuki Ishida, Masanori Izumi, Kohki Yoshimoto, Yoshinori Ohsumi, Tadahiko Mae, and Amane Makino Autophagy Plays a Role in Chloroplast Degradation during Senescence in Individually Darkened Leaves Plant Physiol. 2009 149: 885-893. First Published on December 12, 2008; doi:10.1104/pp.108.130013 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

ENVIRONMENTAL STRESS AND ADAPTATION TO STRESS:

Mélanie Morel, Jérôme Crouzet, Antoine Gravot, Pascaline Auroy, Nathalie Leonhardt, Alain Vavasseur, and Pierre Richaud

AtHMA3, a P_1B-ATPase Allowing Cd/Zn/Co/Pb Vacuolar Storage in Arabidopsis
Plant Physiol. 2009 149: 894-904. First Published on November 26, 2008; doi:10.1104/pp.108.130294 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Jun-Hye Shin, Sung-Ryul Kim, and Gynheung An Rice Aldehyde Dehydrogenase7 Is Needed for Seed Maturation and Viability Plant Physiol. 2009 149: 905-915. First Published on December 3, 2008; doi:10.1104/pp.108.130716 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Lei Zhang, Li-Hong Tian, Jun-Feng Zhao, Yun Song, Cui-Jun Zhang, and Yi Guo Identification of an Apoplastic Protein Involved in the Initial Phase of Salt Stress Response in Rice Root by Two-Dimensional Electrophoresis Plant Physiol. 2009 149: 916-928. First Published on November 26, 2008; doi:10.1104/pp.108.131144 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Deqiang Duanmu, Yingjun Wang, and Martin H. Spalding Thylakoid Lumen Carbonic Anhydrase (CAH3) Mutation Suppresses Air-Dier Phenotype of LCIB Mutant in Chlamydomonas reinhardtii Plant Physiol. 2009 149: 929-937. First Published on December 12, 2008; doi:10.1104/pp.108.132456 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

Pierre Tennstedt, Daniel Peisker, Christoph Böttcher, Aleksandra Trampczynska, and Stephan Clemens Phytochelatin Synthesis Is Essential for the Detoxification of Excess Zinc and Contributes Significantly to the Accumulation of Zinc Plant Physiol. 2009 149: 938-948. First Published on December 12, 2008; doi:10.1104/pp.108.127472 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Theodoros Matakiadis, Alessandro Alboresi, Yusuke Jikumaru, Kiyoshi Tatematsu, Olivier Pichon, Jean-Pierre Renou, Yuji Kamiya, Eiji Nambara, and Hoai-Nam Truong

The Arabidopsis Abscisic Acid Catabolic Gene CYP707A2 Plays a Key Role in Nitrate Control of Seed Dormancy
Plant Physiol. 2009 149: 949-960. First Published on December 12, 2008; doi:10.1104/pp.108.126938 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Jian Sun, Shaoliang Chen, Songxiang Dai, Ruigang Wang, Niya Li, Xin Shen, Xiaoyang Zhou, Cunfu Lu, Xiaojiang Zheng, Zanmin Hu, Zengkai Zhang, Jin Song, and Yue Xu NaCl-Induced Alternations of Cellular and Tissue Ion Fluxes in Roots of Salt-Resistant and Salt-Sensitive Poplar Species Plant Physiol. 2009 149: 1141-1153. First Published on November 21, 2008; doi:10.1104/pp.108.129494 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Piotr Stepien and Giles N. Johnson Contrasting Responses of Photosynthesis to Salt Stress in the Glycophyte Arabidopsis and the Halophyte Thellungiella: Role of the Plastid Terminal Oxidase as an Alternative Electron Sink Plant Physiol. 2009 149: 1154-1165. First Published on December 3, 2008; doi:10.1104/pp.108.132407 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

GENETICS, GENOMICS, AND MOLECULAR EVOLUTION:

Katharine A. Howell, Reena Narsai, Adam Carroll, Aneta Ivanova, Marc Lohse, Björn Usadel, A. Harvey Millar, and James Whelan Mapping Metabolic and Transcript Temporal Switches during Germination in Rice Highlights Specific Transcription Factors and the Role of RNA Instability in the Germination Process Plant Physiol. 2009 149: 961-980. First Published on December 12, 2008; doi:10.1104/pp.108.129874 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Olivia Wilkins, Hardeep Nahal, Justin Foong, Nicholas J. Provart, and Malcolm M. Campbell Expansion and Diversification of the Populus R2R3-MYB Family of Transcription Factors Plant Physiol. 2009 149: 981-993. First Published on December 17, 2008; doi:10.1104/pp.108.132795 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

PLANTS INTERACTING WITH OTHER ORGANISMS:

Manjula Govindarajulu, Sung-Yong Kim, Marc Libault, R. Howard Berg, Kiwamu Tanaka, Gary Stacey, and Christopher G. Taylor GS52 Ecto-Apyrase Plays a Critical Role during Soybean Nodulation Plant Physiol. 2009 149: 994-1004. First Published on November 26, 2008; doi:10.1104/pp.108.128728 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Phillip A. Harries, Karuppaiah Palanichelvam, Weichang Yu, James E. Schoelz, and Richard S. Nelson The Cauliflower Mosaic Virus Protein P6 Forms Motile Inclusions That Traffic along Actin Microfilaments and Stabilize Microtubules Plant Physiol. 2009 149: 1005-1016. First Published on November 21, 2008; doi:10.1104/pp.108.131755 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Gustavo E. Gudesblat, Pablo S. Torres, and Adrián A. Vojnov Xanthomonas campestris Overcomes Arabidopsis Stomatal Innate Immunity through a DSF Cell-to-Cell Signal-Regulated Virulence Factor Plant Physiol. 2009 149: 1017-1027. First Published on December 17, 2008; doi:10.1104/pp.108.126870 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

Francisco J. Redondo, Teodoro Coba de la Peña, César N. Morcillo, M. Mercedes Lucas, and José J. Pueyo

Overexpression of Flavodoxin in Bacteroids Induces Changes in Antioxidant Metabolism Leading to Delayed Senescence and Starch Accumulation in Alfalfa Root Nodules
Plant Physiol. 2009 149: 1166-1178. First Published on December 19, 2008; doi:10.1104/pp.108.129601 [Abstract] [Full Text] [PDF]  

WHOLE PLANT AND ECOPHYSIOLOGY:

Britta Förster, C. Barry Osmond, and Barry J. Pogson

De Novo Synthesis and Degradation of Lx and V Cycle Pigments during Shade and Sun Acclimation in Avocado Leaves
Plant Physiol. 2009 149: 1179-1195. First Published on December 5, 2008; doi:10.1104/pp.108.131417 [Abstract] [Full Text] [PDF]  

SYSTEMS BIOLOGY, MOLECULAR BIOLOGY, AND GENE REGULATION:

Nancy Terrier, Laurent Torregrosa, Agnès Ageorges, Sandrine Vialet, Clotilde Verriès, Véronique Cheynier, and Charles Romieu Ectopic Expression of VvMybPA2 Promotes Proanthocyanidin Biosynthesis in Grapevine and Suggests Additional Targets in the Pathway Plant Physiol. 2009 149: 1028-1041. First Published on December 19, 2008; doi:10.1104/pp.108.131862 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

Robert Jeffrey Schmitz, Yosuke Tamada, Mark Robert Doyle, Xiaoyu Zhang, and Richard Mark Amasino Histone H2B Deubiquitination Is Required for Transcriptional Activation of FLOWERING LOCUS C and for Proper Control of Flowering in Arabidopsis Plant Physiol. 2009 149: 1196-1204. First Published on December 17, 2008; doi:10.1104/pp.108.131508 [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

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