Detailed annotation analysis of 15 ORFs in tomato BAC 240K04
Name | Approximate Coding Region | Best Homology (GenBank1-a) | Best Blastp E Value | Best The Institute for Genomic Research Expressed Sequence Tag (EST) | Putative Protein Function |
---|---|---|---|---|---|
240K04.01 | <6,761–6,831 | T05632 | 2e–31 | AW929546 | Putative permease |
240K04.02 | 12,852–19,435 | No homology | – | AW219175 1-b | Unknown protein |
240K04.03 | 17,278–16,871 | No homology | – | TC43589 | Unknown protein |
240K04.04 | 22,829–26,608 | NP_009196 | 8e–90 | AW223638 1-b | Putative suppressor of yeast gcr2 |
240K04.05 | 27,444–29,478 | AC006340 | 1e–68 | TC413451-b | Unknown protein |
240K04.06 | 42,332–30,012 | AAD22346.1 | e–160 | TC391481-b | Unknown protein |
240K04.07 | 50,514–55,503 | T05634 | e–120 | TC40844 | Putative centromere protein |
240K04.08 | 57,336–64,386 | P77253 | 8e–10 | AI487713 1-b | Unknown protein |
240K04.09 | 70,688–65,478 | T06805 | e–105 | TC404021-b | Putative auxin growth promotor |
240K04.10 | 77,615–79,017 | CAB80933 | 5e–51 | TC40659 | Putative protein phosphatase |
240K04.11 | 81,356–80,189 | AP000381 | e–122 | TC457201-b | Unknown protein |
240K04.12 | 82,223–83,281 | AP002459 | 3e–64 | BE463242 1-b | Putative polyprotein |
240K04.13 | 84,217–86,904 | BAA90383.1 | e–156 | TC415021-b | Putative polyprotein |
240K04.14 | 93,204–88,295 | AAD22365 | 4e–75 | TC404811-b | Putative MADS-box gene |
240K04.15 | 104,210–117,994 | AJ001729 | 2e–25 | AW929351 1-b | Similar to TH65 protein |