Table I. JMJ24 widely affects TE silencing TE categories with changed transcript level in 35S::JMJ24 compared to jmj24-2. Transcript levels of jmj24-2 and 35S:JMJ24 were determined by ATH1 microarrays. TE annotation and categorization were adopted from Slotkin et al. (2009). P values are Benjamini-Hochberg (BH) corrected. n, Number of probes in this category. Arrows indicate the direction of transcript level difference in 35S::JMJ24 compared to jmj24-2
TE CategorynP (BH Corrected)
Retrotransposon.LTR.Gypsy.ATGP1I100.0319
DNA-Transposon5750.0000
DNA-Transposon.MuDR3060.0052
DNA-Transposon.MuDR.nonTIR440.0001
DNA-Transposon.MuDR.nonTIR. ARNOLD1110.0271
DNA-Transposon.nonMuDR2690.0000
DNA-Transposon.nonMuDR.CACTA850.0001
DNA-Transposon.nonMuDR.CACTA. ATENSPM1290.0041
DNA-Transposon.nonMuDR.CACTA. ATENSPM1A60.0361