Table I.

Summary of the significant effects of solar UV-B exposure on gene expression in N. longiflora (see “Materials and Methods” for explanation of the criteria used to assess the significance of the expression changes)

For brevity, the average of the expression ratios obtained with the two probes used for each gene is shown in the table. The complete list is available as Supplemental Table I (see http://www.plantphysiol.org).

Identification No. Description (Name or Sequence Similarity) Clone Accession No. Mean
Photosynthesis-related genes
    1406/7 Tomato lhbC1 gene for LHCII type III 61_1 AW191826 0.55
    1414/5 Nicotiana sylvestris mRNA for the small subunit of Rubisco 64_7 AW191829 0.61
    1548/9 Hevea brasiliensis latex plastidic aldolase-like protein mRNA RE234 CA591767 0.68
    1552/3 Tobacco (Nicotiana tabacum) PSII oxygen-evolving complex 23-kD polypeptide RE283 CA591769 1.80
    1562/3 Spinach (Spinacia oleracea) mRNA for 6.1-kD polypeptide of PSII RN032 CA591774 0.65
    1584/5 Tobacco Rubisco small subunit pseudogene RF071 CA591784 0.55
    1608/9 Tobacco PSII (NtPII10/11) DH108 CA591793 0.51
    1612/3 Tobacco Rubisco small subunit pseudogene DH120 CA591795 0.52
    1615 Tobacco GapC mRNA-encoding cytosolic glyceraldehyde-3-phosphate dehydrogenase DH123 CA591796 0.64
Nitrogen metabolism
    2400/1 Spinach ferredoxin-dependent glutamate synthase precursor 55_2 AW191824 1.87
    2403 Nicotiana plumbaginifolia molybdopterin synthase sulfurylase gene 55_7 AW191825 1.38
    2560/1 Tomato mRNA for beta-alanine synthase RN021 CA591773 0.71
Carbohydrate and cell wall metabolism
    3446/7 Tomato xyloglucan endo-transglycosylase B1 mRNA (XET) RB271 CA591719 1.28
Membrane transport
    4774/5 Pea (Pisum sativum) mRNA for pore protein DH47 CA591865 0.60
Stress response and signaling
    5556/7 Tobacco mRNA for transcription factor NtWRKY2 RE322 CA591771 1.90
    5678/9 N. attenuata WRKY (NtWRKY2) WRKY CA591771 2.20
Oxylipin synthesis
    8382 N. attenuata (DIOX_NICAT) pathogen-inducible alpha-dioxygenase DH54 CA591872 1.45
    8668/9 N. attenuata HPL HPL AJ414400 1.53
    8672/3 N. attenuata LOX LOX AY184822 2.32
    8674/5 N. attenuata AOS AOS AJ295274 1.72
Pls
    9666/7 N. attenuata PI PI AY184823 0.60
Pathogen-responsive genes
    10652/3 Tobacco gene for basic form of pathogenesis-related protein DH099 CA591812 0.41
M. sexta-responsive genes with unknown function
    11330/1 Pepper (Capsicum annuum Yolo Wonder) Sn-1 gene 6_1 AW191805 1.39
    11340/1 Unknown 11_1/5 AW191807 1.33
    11398/9 Unknown 54_4 0.64
    11426/7 Unknown 75_7 1.32
    11450/1 Unknown RB332 1.63
    11496/7 Unknown RC131 1.57
    11500/1 Unknown RC173 1.77
    11518/9 Unknown RD105 1.33
    11524/5 Unknown RD151 0.66
    11534/5 Unknown RE065 1.32
    11544/5 Unknown RE214 1.47
    11590/1 Unknown RF101 0.73
    11616/7 Unknown DH135 1.36
    11620/1 Arabidopsis clone RAFL04-10-H14 (R09662) putative 60S ribosomal protein (At3g49910) mRNA DH138 0.60
R-responsive genes with unknown function
    12730/1 Tobacco mRNA C-7 DH25 CA591843 1.35
    12736/7 Unknown DH28 1.91
    12750/1 Unknown DH35 0.64
    12776/7 Tobacco chloroplast genome DNA DH48 CA591866 1.81
    12786/7 Unknown DH53 0.59
    12798/9 Unknown DH59 0.72
Other
    13412/3 Manilkava zapota 18S ribosomal RNA gene 64_4 AW191828 1.32
    13464/5 Novosphingobium aromaticivorans Saro_115 RB493 CA591728 2.07
    13582/3 Smilax bona-nox internal transcribed spacer 2 and 26S large subunit ribosomal RNA gene RF064 CA591783 1.41
    13626/7 Tobacco RNA-binding Gly-rich protein (RGP-1a) mRNA DH162 CA591801 0.62
    13656/7 Tobacco GTP-binding protein (Ran-A1) mRNA DH124 CA591814 0.70
    13728/9 Tobacco chloroplast genome DNA DH24 CA591842 1.51