Table III.

Characteristics of the detected QTLs explaining growth traits, flowering time and flowering related traits in Ler × Sha RIL population

TraitQTLMap positionLOD score% of varianceAdditive allele effect
Seed weight (mg)
K9D75–453.614.3−0.12
Toal leaf area1 (mm2)34
M1-101–26.73.08613
nga6921–91.93.186.114
CHIB3–6.84.559−17
m5-145–16.36.1312.919
Total leaf area2 (mm2)43
M1-101–26.75.5311.168
ER2–43.73.667.1−55
CHIB3–6.84.79.3−64
SO2625–27.24.168.162
nga 1295–53.93.837.4−65
Total leaf area3 (mm2)37.5
M1-101–26.73.578.1346
ER2–43.74.3710.1−379
CHIB3–6.836.7−331
MBK55–72.45.3612.6−441
Relative growth rate 2-1 (area)34.3
M1-101–26.72.897.40.07
ER2–43.73.5117.4−0.09
CHIB3–6.82.995.2−0.06
MBK55–72.42.754.3−0.04
Relative growth rate 3-2 (area)18.3
M1-101–26.73.2510.20.11
nga3612–48.62.583.5−0.09
nga2255–02.884.60.10
Relative growth rate 3-1 (area)16.7
M1-101–26.73.4510.40.12
nga2255–02.696.30.09
Dry weight 1 (mg)25.8
M1-101–26.73.248.30.39
CHIB3–6.84.2311.1−0.44
SO2625–27.22.526.40.30
Dry weight 2 (mg)24.1
M1-101–26.72.656.83.73
ER2–43.73.810−4.58
nga2255–02.837.33.68
Relative growth rate (weight)20.4
ER2–43.72.756.7−0.11
nga2255–03.338.20.12
M1-10 × CHIB5.5
Specific leaf area (mm2.mg−1)
MBK55–72.43.4113.1−16
Leaf initiation speed20.6
F8J23–582.567.80.59
MBK55–72.44.0612.80.78
Chlorophyll fluorescence (SD)27.6
MBK55–72.46.2821.40.008
m4-14 × MBK56.2
Flowering time SD (days)52.4
M1-131–78.73.774.8−1.19
CHIB3–6.87.44111.78
FRI4–0.811.4818.7−2.33
K8A105–77.711.0817.92.31
Flowering time LD (days)66.6
nga591–03.383.61.05
M1-131–78.78.9211−2.13
M2-362–26.63.694−1.05
CHIB3–6.84.835.51.15
FRI4–0.817.1425.5−2.52
m5-145–16.35.847−1.32
K8A105–77.78.06101.63
Total leaf number63.4
nga591–02.5130.71
M1-131–78.77.249.7−1.54
ADH1–92.33.634.71.07
ER2–43.74.846.1−1.00
FRI4–0.815.4725.2−1.81
m5-145–16.34.886.4−0.98
K8A105–77.76.138.31.07
Rosette leaf number63.8
M1-131–78.76.698−1.24
ADH1–92.33.794.50.91
ER2–43.77.459−1.01
FRI4–0.81725.9−1.58
m5-145–16.36.137.5−0.88
K8A105–77.77.078.90.93
Cauline leaf number48.1
F3F191–17.25.6111.40.22
M1-131–78.76.6913.8−0.31
ADH1–92.32.735.20.20
FRI4–0.85.8612−0.24
K8A105–77.72.975.70.17
Total plant length (cm)81.7
F5I141–69.12.71.5−1.51
ADH1–92.34.992.91.70
M2-262–103.341.8−1.49
ER2–43.746.2670.1−9.24
FRI4–0.84.472.5−1.68
SO2625–27.24.982.9−1.74
Plant length till 1st silique (cm)60.6
CIW121–34.510.9314.51.20
ER2–43.723.9542.6−2.10
F8J23–583.143.50.65
Inflorescence length (cm)79.9
nga6921–91.94.142.71.52
nga11452–5.32.611.7−1.09
ER2–43.743.672.4−7.19
SO2625–27.24.593.1−1.49