Table I.

Spider mite-regulated genes

PlantTC/AT/GBAnnotationCategoryAvg Ratio Day OneP- Value Day OneAvg Ratio Day FourP-Value Day Four
LeTC124387Wound-induced proteinase inhibitor IJA42.40.02016.20.001
LeTC124100Leu aminopeptidaseJA28.70.0038.70.000
LeK03291Wound-induced proteinase inhibitor IIJA19.90.01613.70.000
LeTC123946Cathepsin D inhibitorJA13.60.0169.10.002
LeTC116040Wound-induced proteinase inhibitor IIJA10.30.00611.10.000
LeTC124388Wound-induced proteinase inhibitor IJA6.90.0255.00.000
LeTC116240Wound-induced proteinase inhibitor IJA6.40.0642.00.008
LeAI488671Proteinase inhibitor IJA2.90.1392.20.003
LeTC117620Allene oxide cylaseJA2.80.0001.90.000
LeTC115727PR-1bJA1.70.0791.90.005
LeTC130310PatatinJA1.70.0001.30.008
LeTC124098Proteinase inhibitor; auxin-inducedJA, auxin21.20.0055.50.001
LeTC115911PR-P6SA8.80.0007.00.007
LeTC116619ChitinaseSA3.30.0693.00.005
LeTC124531Acidic endochitinaseSA2.50.0163.10.030
LeTC124012TSI-1 proteinSA1.90.0032.30.013
LeTC116545Osmotin-likeSA, ET2.00.0112.30.104
LeTC117926Subtilisin-like proteinaseSA, JA2.30.0172.00.017
LeTC118684MLO-like proteinSA, PATHO2.60.0452.80.014
LeTC121425Callose synthaseSA, PATHO2.00.0121.50.239
LeTC116386Ethylene-responsive small GTP-binding proteinET2.70.0461.60.007
LeTC116831Ethylene response factor 3ET2.30.0891.60.037
LeTC116989Ethylene-inducible proteinET1.70.003−1.40.000
LeTC130320Geranylgeranyl pyrophosphate synthetase SEC MET13.10.0027.10.001
LeTC125929Anthocyanidine rhamnosyl-transferase SEC MET2.30.1701.80.024
LeTC125242Diphosphomevalonate decarboxylaseSEC MET−1.10.8021.60.009
LeTC1282251-Phosphatidylinositol 4-kinaseST3.10.0682.70.018
LeTC120983Protein phosphatase type 2CST3.10.0383.90.072
LeBE434771Diacylglycerol kinaseST2.60.0151.60.093
LeTC1259733-Phosphatidylinositol 5-kinase, FAB1ST2.30.0291.60.907
LeTC129237Phosphoinositide-specific phospholipase CST2.20.0191.80.003
LeTC129136Leu rich repeat containing protein kinaseST2.10.0471.80.087
LeTC122585Phosphoinositide-specific phospholipase Dβ2ST1.90.0201.50.242
LeTC125158Phosphoinositide-specific phospholipase Dα1ST1.80.0111.00.995
LeTC120843bHLH transcription factor JAF13-likeST1.70.0151.20.001
LeTC117471SINA2 protein ST1.30.038−1.60.003
LeTC115865CatalaseST1.20.7771.60.000
LeTC125541LSD1 homolog 2ST−1.70.0001.10.985
LeTC117304Triacylglycerol lipaseLIPASE2.20.0051.30.009
LeTC115712Plastidic aldolasePLASTID1.60.640−1.80.000
LeTC123753Rubisco small subunit PLASTID−1.70.005−1.40.019
PhL21978ACC oxidaseET13.10.0374.00.932
PhAY044235AP2 domain protein, ethylene response factorET2.90.043−1.20.300
PhM90294ACC oxidaseET2.10.0381.20.776
PhAF210049Gibberellin induced protein, gip1GA−1.10.3833.70.019
PhAt1075280Isoflavone reductaseSEC MET21.50.0474.60.922
PhBT002340DOXP synthaseSEC MET3.60.0401.30.678
PhAAL50566Malonyl CoA: anthocyanin 5-O-glucoside-6′′′-O-malonyltransferaseSEC MET3.30.0201.90.949
PhCAA79856DAPH synthase SEC MET2.30.0111.50.675
PhAT3G23810.1S-adenosyl-l-homo-Cys synthaseSEC MET1.90.011−1.40.017
PhAF233639Dihydroflavonol 4-reductase, DfrASEC MET1.40.0714.80.046
PhY07721Glutathione S-transferase, An9SEC MET1.40.9784.70.012
PhAF020545bHLH transcription factor, jaf13SEC MET1.30.9344.30.024
PhU9478MYB-like transcription factor, An11SEC MET1.30.8005.10.007
PhAF233638Chalcone isomerase, chiASEC MET1.30.9605.30.042
PhAF155332Flavonoid 3′-hydroxylase, ht1SEC MET1.20.7784.10.004
PhAF260919bHLH transcription factor, An1SEC MET1.10.7475.60.006
PhAF146702MYB-like transcription factor, An2SEC MET1.10.6175.80.001
PhAF509865NAM-like, nh2ST6.70.0415.70.807
PhAT1G67900.1Expressed protein phototaxisST6.50.0332.60.699
Phn.a.NAM-like, nh23ST5.50.0445.60.647
  • The cDNAs from the dedicated microarray that were either 1.6-fold up- or down-regulated on day one or day four are shown. The ratios indicate the relative transcript abundance in spider mite-infested plants over uninfested plants. The cDNAs were either from tomato (Le) or Petunia (Ph). Where possible the corresponding TC numbers, GenBank numbers (GB), or AT numbers with the highest homology are shown (n.a. = not applicable). The cDNAs were subdivided in various categories according to their function: ET, ethylene-related; GA, gibberellin related; JA, jasmonate related; SA, salicylic acid related; PATHO, pathogen related; SEC MET, secondary metabolism; ST, signal transduction. The P-values (adjusted for multiple testing) denote the significant difference of the average ratios (Avg Ratio) of infested over uninfested plants in three independent experiments.