Table III.

Nineteen clones that were different in their ORF from those predicted annotations in the genome database

FamiliesLocus IDNew GenBank AccessionsORF in bpDifferences (Ours VS MIPS)1
MIPSOurs
MYBAt1g14600AJ63048625276833 bp deleted and 549 bp added at 219
ABI3/VP1At1g28300AJ6304961,0921,0893 bp deleted at 1,011
WRKY (Zn)At1g29280AJ63049478076218 bp omitted from codon 1
AP2/EREBPAt1g79700AJ5803799279126 bp deleted at 171, 9 bp deleted at 250
C2H2 (Zn)At3g01030AJ6304911,0621,11654 bp added at 633
MYBAt3g10000AJ6304871,4911,44613 bp added and 58 bp deleted at 368
CPP (Zn)At3g16160AJ6304951,0831,1073 bp deleted at 137, 6 bp added at 405, 16 bp added and 4 bp deleted at 630, 9 bp added at 716
AP2-EREBPAt3g23230AJ58037736942051 bp added at 293
ABI3/VP1At3g26790AJ6304979429339 bp deleted at 715
C2H2 (Zn)At3g27970AJ6304921,0651,0749 bp added at 315
MYBAt4g12670AJ6304881,5631,50063 bp deleted at 1,232
MYBAt4g39160AJ6304891,6381,806168 bp added at 49
C2H2 (Zn)At5g03150AJ6304931,5061,5126 bp added at 187
MYBAt5g17780AJ6304901,2601,2546 bp deleted at 418
bHLHAt5g38860AJ6304991,062897165 bp deleted at 665
AP2/EREBPAt5g50080AJ58037866366327 bp deleted at 75, 27 bp added at 202
bHLHAt5g53210AJ6304988851,095210 bp added at 583.
C2H2 (Zn)At5g54360AJ6305008137639 bp deleted at 681, 24 bp deleted at 697, 17 bp deleted at 750
bHLHAt5g61270AJ63048480483719 bp added at 159, 14 bp added at 245
  • 1 All nucleotide positions started from A of the translation initiation codon.