Table II.

Genes up-regulated in Arabidopsis under 250 mM NaCl stress for 2h

Clone NameaMIPSbGenecLog2 RatiodSDe
RAFL07-11-M21At5g52310Hydrophilic protein, responsive to desiccation, RD29A3.770.09
RAFL08-16-M12At2g33380Putative calcium-binding EF-hand protein, responsive to desiccation, RD203.520.15
RAFL05-21-C17At4g27410NAM-like protein and ATAF-like protein, responsive to desiccation, RD262.280.39
RAFL04-12-G16At2g43570Putative endochitinase2.250.25
RAFL05-12-M18At4g09010Ascorbate peroxidase, putative2.130.1
RAFL08-12-H04At2g26690Putative nitrate transporter2.120.39
RAFL05-20-O23At2g39800Putative Δ-1-pyrroline 5-carboxylase synthetase, AtP5CS120.29
RAFL05-10-D11At1g73480Lysophospholipase homolog, putative1.960.15
RAFL08-11-P07At5g17460Unknown protein1.950.14
RAFL09-66-C10At3g57260β-1,3-glucanase 2, BG21.930.07
RAFL05-21-F13At1g16850Unknown protein1.90.42
RAFL05-21-C06At2g24850Putative tyrosine aminotransferase1.890.39
RAFL05-05-G20At3g02480Unknown protein1.860.36
RAFL05-14-E16At1g62570Similar to glutamate synthase1.840.23
RAFL05-08-P17At1g20450Group II LEA protein, early responsive to desiccation, ERD101.840.08
RAFL07-15-N09At4g04020Plastid-lipid associated protein PAP11.760.26
RAFL06-09-E13NDfUnknown protein1.760.14
RAFL05-10-J09At1g78070Unknown protein1.730.03
RAFL05-11-A18At4g37590Phototropic response protein family1.690.27
RAFL05-16-I09At5g20830Suc-UDP glucosyltransferase1.670.3
RAFL05-16-H23At4g28140AP2 domain transcription factor, putative1.660.24
RAFL09-09-I16At5g13630Cobalamin biosynthesis protein1.650.04
RAFL08-08-L20At1g56600Galactinol synthase, AtGolS21.630.81
RAFL05-14-A12NDPutative myosin heavy chain1.620.17
RAFL08-11-H16At3g144409-cis-epoxycarotenoid dioxygenase, AtNCED31.620.34
RAFL08-09-C23At1g54100Aldehyde dehydrogenase, putative1.60.05
RAFL05-17-I08At2g43020Putative amine oxidase1.590.19
RAFL07-07-G15At1g01720NAC domain protein, putative1.590.82
RAFL04-16-P21At4g37370Cytochrome P450-like protein1.580.41
RAFL05-11-I09At5g52300Hydrophilic protein, responsive to desiccation, RD29B1.580.66
RAFL05-21-L12At3g22830Heat shock transcription factor-like protein1.570.53
RAFL07-07-J02At4g24960ABA-induced like protein, AtHVA22d1.570.43
RAFL05-19-I05At1g01720Strong similarity to OsNAC6 protein from Oryza sativa1.560.27
RAFL06-07-B19At3g11410Protein phosphatase 2C, PP2C1.550.18
RAFL05-19-O22NDUnknown protein1.540.83
RAFL09-06-L09At3g12580Heat shock protein 701.520.16
RAFL05-03-A05At2g42540Cold-regulated protein, cor15a1.510.3
RAFL05-15-H13At5g25610Responsive to desiccation, RD221.510.26
RAFL05-14-J01At2g29450Glutathione S-transferase1.510.26
RAFL06-12-H12At5g02020Unknown protein1.510.26
RAFL05-15-A16At5g53120Spermidine synthase1.50.26
RAFL05-15-E19At3g05640Putative protein phosphatase 2C, PP2C1.50.09
  • a RIKEN Arabidopsis full-length (RAFL) cDNA.

  • b MIPS protein code.

  • c Indicates the putative functions of the gene products that are expected on the basis of sequence similarity.

  • d Ratio = log2Cy5/Cy3.

  • e Standard deviation.

  • f ND, No data.