Table I.

Annotation categories incorporated in GENEVESTIGATOR as of July 2004

Plant Tissues/OrgansDevelopmental StagesEnvironmental Factors (Continued)
0 Callus10 Categories based on the Boyes key ontology:Hormones
1 Cell suspension    A) 0.10 … 0.70    Ethylene
2 Seedling    B) 1.00 … 1.02    Auxin
    21 Cotyledons    C) 1.03 … 1.05    Abscisic acid
    22 Hypocotyl    D) 1.06 … 1.08 / 3.20    Gibberellin
    23 Radicle    E) 1.09 … 1.12 / 3.50Atmosphere
3 Inflorescence    F) 1.13 / 1.14 / 3.70 / 5.10    Ozone
    31 Flower    G) 3.90 / 6.00 / 6.10    Carbon dioxide
        311 Carpel    H) 6.30 / 6.50Illumination
        312 Petal    I) 6.90 / 8.00    Light intensity
        313 Sepal    J) 9.70        Light
        314 Stamen        Dark
        315 Pedicel    Light quality
    32 Silique        Far-red
    33 Seed        Blue
    34 Stem        UVA
    35 Node        UVB
    36 Shoot apex        Visible
    37 Cauline leaf
4 Rosette
    41 Juvenile leafEnvironmental FactorsBiotic interactions
    42 Adult leafNutrients/heavy metals    Pseudomonas syringae
    43 Petiole    Phosphate    Gigaspora rosea
    44 Senescent leaf    Nitrate    Agrobacterium tumefaciens
5 Roots    Sulfate    Heterodera schachtii
    51 Primary root    Potassium    Erisyphe cichoracearum
    52 Lateral root    WaterProgrammed cell death
    53 Root hair    Suc/Glc    Senescence
    54 Root tip    Lead    Heat
    55 Elongation zone    Zinc    Cold