Table III.

P-values indicating the occurrence of tomato homolog clusters at random within ±1-Mb intervals in the Arabidopsis genome

Tomato RegionTomato Gene/MarkerArabidopsis GeneP-Value
LeIRT1/LeIRT2LeIRT1, LeIRT2At4g19680/At4g196900.014
T1668At4g204100.016
T1698At4g198800.015
CLEC27M9At4g162500.607
At4g181300.002
CLPT1E8At4g189700.014
LeIRT1, LeIRT2At1g312600.001
T1654At1g295200.002
CLPT2K20At1g311600.001
CLPT1E8At1g29660/At1g296700.002
At1g338111.000
T984At1g305800.001
LeIRT1, LeIRT2At5g451050.012
T1105At5g432800.062
T1698At5g45020/At5g449900.012
At5g44000.012
CLPT1E8At5g456700.064
LeNRAMP1LeNRAMP1At1g808301.000
T1161At1g774700.353
T675At1g776700.353
LeNRAMP1At5g673300.229
T1071At5g657600.328
LeNRAMP1At2g231500.334
T1071At2g242800.320
T1787At2g279200.056
CLET10O11At2g272900.055
LeNRAMP1At4g187900.337
T1014At4g211100.342
LeNRAMP1At1g159600.377
T1787At1g15000.377
LeNRAMP3LeNRAMP3At2g231500.280
T1480At2g251400.073
CTOB9L18At2g237800.262
T1744At2g265600.626
LeNRAMP3At5g673300.144
T634At5g673700.140
CLER17N11At5g657000.276
LeNRAMP3At4g187900.655
T1003At4g183700.659
LeFRO-TC124302LeFRO-TC124302At5g23990/At5g239800.072
T1540At5g239400.074
T1424At5g244600.069
T1429At5g236700.075
LeFRO-TC124302At1g01580/At1g015900.526
CLEC37C6At1g017800.542
T1659At1g053501.000
LeFRO-TC124302At5g49730/At5g497400.005
At5g501600.001
T1119At5g531800.030
T1321At5g520500.000
T1155At5g511500.000
T648At5g515400.000
T753At5g523900.001
T1278At5g503200.001
Lefro1/Lefro-129233Lefro1/Lefro-129233At1g01580/At1g015900.018
CLES5J1At1g018200.021
T1409At1g016100.019
T1327At1g013000.015
Lefro1/Lefro-129233At1g230201.000
T1173At1g202001.000
LeNASLeNASAt1g092400.015
T1118At1g098300.069
T1687At1g094300.016
At1g106700.065
CLET4E21At1g066800.254
LeNASAt1g564300.190
T1176At1g567000.183
T1485At1g547800.226
T1687At1g608101.000
LeNASAt5g049500.262
T141At5g050100.261
T852At5g070200.260
LeNASAt5g560800.629
T1084At5g271900.643
CTOC14I18At5g609101.000
  • P-values were calculated by Fisher's exact test (“Materials and Methods”). P-values less than 0.05 are considered to show significant nonrandom clustering. Tandemly repeated genes were counted as one. P-values for iron uptake genes are in bold.